Misgurnus anguillicaudatus (oriental weatherfish): 129419075
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Entry
129419075 CDS
T09481
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129419075 (ctcf)
03036 Chromosome and associated proteins [BR:
manu03036
]
129419075 (ctcf)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129419075 (ctcf)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129419075 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Roughex
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
DTHCT
zf-C2H2_15
zf-BED
DUF7128
Motif
Other DBs
NCBI-GeneID:
129419075
NCBI-ProteinID:
XP_073709686
LinkDB
All DBs
Position
15:complement(21858680..21866610)
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AA seq
810 aa
AA seq
DB search
MKYTFSVQVIPMEGGPTEAVVEEAGDAFKAKECKTYQRRREDEEVGAELLQAAGLEQVQA
EGEAVVTQQQLVEGVVNVNSSVEMMVMESLDPTLLQMKTEVMEAAVGGAVGVAGSAHEAT
VTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATTMPKD
GEPVICHTLPLPEGFQVVKVGANGEVETVEQDELQAQEEQPQQQVEDEMAEVQNEDPNWS
KDPDYAPPVKKTKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKP
PKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRN
HLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIR
SHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT
ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKN
EKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSQCDKTFRQKQLLDMHFRRYHDPTFV
PTSFVCNKCGKTFTRKNTMARHAENCSGVDSAEGENGTPPKKGRGGRKRKMRSRKDDDDD
DDDSDEHGEPDLEDIDEEEEEEEIIEDDQMDMEQAPPSIPIPAPVEPPVKRKRGRPPKNA
AKVSPVKSGPNTTPATAAIIQVEDESTGAIENIIVKKEPEASDTAVADVQPVVEEVDAIE
ADVETVQIAIPEAAPNGDLTPEMILSMMDR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataccttttcggttcaggtaatacccatggaggggggaccgaccgaggcagtg
gttgaagaggcaggggatgcttttaaggcaaaggaatgtaagacataccaaaggcggcgt
gaggatgaagaggtgggagctgaactgctgcaggctgctgggttagaacaagtccaggct
gaaggagaggctgtagtgacccagcagcaactggttgaaggagtagttaatgtcaacagc
agtgtggaaatgatggtgatggagtccctggaccctaccttgcttcagatgaagacagaa
gttatggaggctgctgtcggaggagccgttggcgtggccggctctgcgcatgaagccact
gtcaccactgtcgatgacactcagatcatcaccctacaggtggtcaacatggaagagcaa
cagttggggttgggagagctgcagctggtgcaggtgcctgtttcggctgtgcccgtcact
gcagccactgtagaagagttgcagggaacgctggtggatgccactaccatgcctaaagat
ggagagccagtcatttgtcacacactgccgctgcctgagggttttcaggtggttaaggta
ggtgcaaatggagaagtggagacggtggagcaggatgagcttcaggcccaagaggagcag
cctcaacagcaagtagaggatgagatggccgaagtccaaaatgaagaccccaactggtcc
aaagatccagactacgcaccacctgttaaaaagactaagaagacaaagaaaagcaagctg
cgctacaacacagagggagataaagatatggatgtgtccgtgtacgactttgaagaagaa
cagcaggaaggattgctctctgaggtcaatgctgagaaagttgtgggcaacatgaaacca
cccaaaccaaccaaaatcaaaaagaagggtgttaagaagacattccagtgtgagctgtgt
agttacacctgcccacggcgctccaacttggaccgccacatgaagagccacacagatgag
aggcctcacaagtgccatctttgtggacgagccttcaggactgtcaccttgttaagaaac
caccttaacacccacacaggcaccagaccacataagtgcactgactgtgacatggctttt
gtcaccagtggagagctggtgcgacacagacgctacaagcacactcatgagaaaccattc
aagtgctccatgtgtgactatgccagtgtggaggttagtaagctgaagcgccacattcgc
tctcacactggagagcgtccgttccagtgcagcttgtgcagttatgccagtagagatacc
tacaagctgaaaagacacatgaggacacactcaggagagaagccctatgagtgctacatc
tgtcatgcacgtttcacccagagtggcaccatgaagatgcacattctgcagaagcacaca
gaaaatgtggcaaagtttcactgcccccactgtgacacagttattgcccgcaaaagtgat
ctcggtgtacatctccgtaagcagcattcctacattgagcagggcaggaagtgccgctat
tgtgatgctgtgtttcatgagcgctatgctctcatccaacatcagaagtcccacaaaaac
gagaaacgattcaaatgtgaccagtgtgactatgcatgccgtcaggagcgccacatggtc
atgcataagcgcacccatactggggagaagccatatgcgtgtagccaatgtgacaagacc
ttcaggcagaaacagctcctggacatgcactttaggcgttaccatgaccctacctttgta
cccacatcgtttgtatgcaacaagtgtggcaagaccttcactcggaagaacaccatggcc
aggcatgctgaaaactgctctggtgtggattctgctgaaggagaaaatggtactccacca
aagaaaggccgtgggggcagaaagaggaagatgcgctctagaaaggatgatgatgatgat
gacgatgactctgatgagcatggagagcctgatctagaagacattgatgaagaggaagaa
gaggaggagattattgaggatgatcagatggatatggaacaagctccacccagcattcct
atccctgctcctgttgaaccacccgttaagaggaaacggggcagaccccccaagaatgca
gccaaggtttctcctgtcaagtctggtccaaataccaccccagctactgctgccatcatc
caagtggaggatgaaagcacgggggccattgagaacatcatcgtgaagaaggagcctgaa
gcctctgatacagctgttgctgatgtccagcctgtggtagaagaggtggacgcgattgag
gctgatgtagaaacagtgcagatagccatccctgaagctgcacctaacggcgaccttact
cccgaaatgatccttagcatgatggaccggtga
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integrated database retrieval system
