Misgurnus anguillicaudatus (oriental weatherfish): 129419103
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Entry
129419103 CDS
T09481
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129419103 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129419103 (cstf3)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129419103 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_16
TPR_6
NorB_cytochrome_c-like
Motif
Other DBs
NCBI-GeneID:
129419103
NCBI-ProteinID:
XP_055030093
LinkDB
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Position
15:complement(11273993..11293997)
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AA seq
716 aa
AA seq
DB search
MSTETAPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQAIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGSLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFLAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYAAMIQEAVVAPSAPTLKDEADRKPEYPKPDTCQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKILPPPSCFTGPFVQVDEMMETLRRCVLPETVDAAVELITG
KQLEMSSEGNGPVENHGMANKSLKRPNADSDEEEDKGSVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgaaactgcaccagaccaggcggcagagtacatcccagagaaggtcaagaaa
gcagaaaagaagttggaagaaaatccatatgacctcgacgcgtggagcatactgattcga
gaagcacagaaccaagccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggccgattctggaaactttacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttgatgaaggtcctgcacattgacctg
tggaagtgttacctctcatatgtccgtgaaaccaaaggaaaactgcccagctataaggaa
aagatggcacaagcttatgattttgctttggataagataggaatggaaattatgtcctat
cagatttgggtggattacatcaattttctcaagggggttgaagccgtgggctcgtacgca
gagaatcagcgcatcacggccgtcagacgcgtgtaccagagaggctgtgtcaatcccatg
attaatattgagcaactttggagggattacagtaaatatgaggagggcataaatgtgcat
ttggccaaaaagatgattgaagatcggagcagggactacatgaacgccaggagagtcgct
aaggagtatgagacggttatgaagggtctagaccgaaacgccccatcagtgccgccccaa
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggagaag
agcaacccactgcgcaccgaagaccagacacttatcacgaaaagagttatgtttgcctat
gagcagtgccttttggtacttggacatcatcctgacatctggtacgaagctgcccagtac
ctggaacagtccagtaaactactggcagaaaaaggggacatgaataatgccaagctgttt
agtgatgaggcagctaacatttatgagcgtgctataggatctctgctcaagaaaaacatg
ctactttacttctcctttgcagactatgaagagagtcggatgaaacacgagaaggttcat
agtatatacaaccgcctcctcgcgatagaagatattgatcctaccttggtctacattcag
tacatgaagttcgctagaagagctgaaggcatcaagtctggccgaaccatctttaaaaaa
gccagagaagaccttcggacacggcatcatgtgtacgttactgctgctcttatggagtac
tactgcagcaaggacaaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggcgacattcctgaatacattttagcctacatcgattacctctctcacctaaacgaggac
aacaacaccagagtcctgtttgagagggtgcttacgtctggaagtctttcccctgagaag
tctggggaaatttgggcacgctttcttgccttcgagagcaacatcggggatttagccagt
atcctgaaggtagagcgaagacgtttcctggccttcaaggatgagtacgagggcaaggag
acggctctgctggtggaccggtacaagtttatggatctgtatccttgctcaccctgcgag
ctcaaagccctcggctacaaggatgtgtctcgtgccaaatatgcagcaatgatccaagag
gctgtggttgctccatctgcaccaacgctgaaggatgaagccgaccgcaaacccgagtac
cccaaacccgacacttgccagatgatcccttttcaaccacgacatctcgcccctcctgga
cttcaccctgttcctggaggagtgtttcctgtcccacccgctgctgttgttctcatgaag
atcctcccgcctcccagctgctttacaggtccttttgtgcaagttgacgagatgatggag
actctcagaagatgtgtactgccagagaccgtagatgctgctgtagagttgatcaccggc
aaacagttagagatgagcagcgagggaaacggtcctgtggagaaccatggaatggcaaac
aaatccttaaaaaggccaaacgcggattcggatgaagaggaagacaaagggtccgtcgca
cctccgattcacgacatctatcgagcacgacagcagaagaggattcgatga
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