KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129419125
Entry
129419125         CDS       T09481                                 
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03420  Nucleotide excision repair
manu04115  p53 signaling pathway
manu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129419125 (ddb2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129419125 (ddb2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    129419125 (ddb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:manu04121]
    129419125 (ddb2)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129419125 (ddb2)
Ubiquitin system [BR:manu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129419125 (ddb2)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129419125 (ddb2)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_RIG_2nd WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_NWD2_C MIOS_WD40
Other DBs
NCBI-GeneID: 129419125
NCBI-ProteinID: XP_055030128
LinkDB
Position
15:complement(22869582..22873695)
AA seq 507 aa
MARRKAQTESDPAKQTKNVKSKKRINEESSESLSKKLKAKNDDKTTPTAETYIKASVGWI
GGQKKLGKTSILHYIYQSSLGQSIHAQLRQCLQEPFIRSLRDYRLHRTASPFDRRVTCLD
WHPTHPTTVAVGSKGGDIILWDYDAQNKRTFIQGKGAGDTIGEMKFCPTDVSKVYVASGD
GTISVQSFEGLPSQILSRTPDCGHDHHDLCYWYCCVDVSVSRQMLVTGDNAGRLLLLGLD
GHSILNEKLHTGKVTHAEFSPRCDWLLATSSVDATVKLWDLRNIKDKNSYLTKMPHEKPV
NSAYFNPTDSTKLLTTDQMNQIRIYCSYDWSKPDQIITHPHRQFQHLTSIKATWHPIYDL
VVAGRYPDDRVLVNDKRTIDFYDANSGRLVHQLRDPNTHGIISLNKFSPTGDVLASGMGF
NILIWKREDTLLNSVHEKQGFAEETAENSGGRAGTSRSQTSARQQSQRGKRATEEKAKLK
KKLSSLSTTETKARSKTESKTLKAKKK
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggcgagaagaaaagctcaaacggaatcggaccctgcgaaacagacgaagaatgtgaaa
tccaaaaagagaatcaatgaagaatcatctgaatcactctccaagaaactgaaagccaaa
aacgacgacaagacgacacccacagcggaaacctacataaaggcaagtgtgggatggatt
ggaggtcaaaagaaattgggaaaaactagtatacttcactacatataccaaagctccctc
ggacagagcatccatgcacaacttcggcagtgtctgcaagagccttttatccgctctctt
agagactacagactgcatcgcacagccagcccgtttgaccgaagagtcacttgtctggat
tggcaccctacccatcccactactgttgctgtgggatcaaagggtggagacatcatcctg
tgggattatgatgcacaaaataagagaaccttcatacaggggaaaggcgctggtgacacc
attggggagatgaagttttgtcccacagatgtgtccaaggtctatgttgcttctggtgat
ggtactatctcagtgcaaagttttgagggcctcccaagtcagatactgtcacgaacccca
gactgtggccatgatcaccatgatctttgttactggtactgctgtgtggatgtgtctgta
agccgtcagatgcttgtgactggggataatgctggaagacttcttctgctaggcctggat
ggacattctatcttgaatgagaaattgcacacaggcaaagtcacacatgcagaattcagc
cctcgatgtgattggctgttggcaacatcctctgttgatgctacagtcaagctgtgggac
cttaggaacatcaaagacaaaaacagttatttgactaaaatgcctcacgaaaaaccagtc
aattctgcatattttaatcccactgatagcaccaagctgttaactacggaccagatgaat
cagatcaggatttactgttcatatgactggtccaaaccggatcaaattattactcaccct
catcgacagttccagcacctaacgtccatcaaggcaacctggcatcccatatatgacctt
gtcgtggctggccgctatccagacgatcgtgtccttgtcaatgacaagcgaactattgat
ttttatgatgcaaacagtggtaggcttgtgcatcagctcagggaccccaatacccatggt
attatatctctcaacaaatttagtccaacaggggatgtactggcatcaggcatggggttt
aatattttgatctggaagcgagaggacacactgctgaacagtgttcatgaaaaacaggga
tttgcagaggagacagcggagaacagtggaggcagagctggaacctccagatcccaaacc
agtgctcgacagcaatcacaaagaggcaaaagagcaactgaagaaaaagccaagctgaag
aaaaagctgtcatcactgtcaacaacagagaccaaggccaggagcaaaacagagagtaag
actttaaaggcaaagaaaaagtga

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