Misgurnus anguillicaudatus (oriental weatherfish): 129419234
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Entry
129419234 CDS
T09481
Symbol
gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129419234 (gabpb1)
03029 Mitochondrial biogenesis [BR:
manu03029
]
129419234 (gabpb1)
Transcription factors [BR:
manu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
129419234 (gabpb1)
Mitochondrial biogenesis [BR:
manu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
129419234 (gabpb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
129419234
NCBI-ProteinID:
XP_055030292
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Position
16:complement(561374..569729)
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AA seq
386 aa
AA seq
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MMGSKRQVVPQGSAGICMFRKMSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGT
SPLHLSAQFGHFSTTEVLLRAGVSRDARTKVDRTPLHMASSEGHASIVELLLKHGADVNA
KDMLQMSALHWAVEHSHRDVAEILLRFGADVHAQSKFCKNALDIALDKGCHELTEILQVA
MRNQINTNPDTNPDMLSVHTATPQFIIGPGGVVNLAGLVSPGNASRSTVVAAEEVITADT
VDGAIRQVVSSGGQQVITIVTDGIQLGNLQTGTGISQPIIVTMPDGQQVLTVSDTEVAEE
TVISDEPIIKRQRVKEEDDDEMTDAHDVQFQKTISLDDFQEKVALLKQLEEANREAQRYR
QQFLKKEQEAEIYRQKLEAITRKKAL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgggatcaaaaagacaagtagtgccgcaagggtcggccggtatctgtatgtttcga
aagatgtctctggtggatttgggaaaaaagctcttggaagcagctcgtgccggtcaggac
gacgaggttcggatactgatggccaatggagcgcccttcaccaccgactggctggggacg
tctccgttgcacctgtcggcgcagttcggtcatttctccaccacggaggttctgctgcgg
gccggggtcagcagagatgcccgcaccaaagtggaccgaacgcccctgcacatggcttcg
tccgaaggtcacgctagcatcgtggagctgctgctgaagcacggcgctgatgtgaacgct
aaggacatgctgcagatgagcgccctgcactgggccgtggagcacagccacagagacgtg
gcggagattctgctgcgcttcggcgccgacgtccacgcgcagagtaaattctgtaagaac
gcgctggacatcgccctggacaaaggctgtcatgagctcactgaaatcctgcaggtggcg
atgcggaaccagatcaacacaaaccccgacacgaatccagacatgctgagcgttcacacg
gccacgccgcagttcatcatcggtcccggaggcgtggtcaacctggccggactcgtctca
cctggaaacgccagcagatccacagtcgtagccgcagaggaggtgataacggcggacacg
gtcgatggggccattcgacaggtcgtaagctctggaggtcagcaggtcattaccatagta
acagatggcattcagctgggcaacctgcagactggtacaggcatcagccagcccataata
gttaccatgcccgatgggcagcaggtattaacggtgtcggacacggaggtcgcggaggaa
acggtgatcagcgatgagccgattattaaacggcagcgcgtgaaggaagaagacgacgat
gagatgaccgatgcacatgacgtccaatttcagaaaaccatctcgctggacgactttcag
gagaaagtggctctgctaaagcagctggaagaagcgaatcgtgaagctcagagatacaga
caacagttcctgaagaaagaacaggaggctgaaatttacagacagaaactggaggccatc
acacgaaagaaagcactgtga
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