Misgurnus anguillicaudatus (oriental weatherfish): 129419857
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Entry
129419857 CDS
T09481
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129419857 (dhx34)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129419857 (dhx34)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129419857 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_16
AAA_23
XAF1_C
Motif
Other DBs
NCBI-GeneID:
129419857
NCBI-ProteinID:
XP_055031022
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All DBs
Position
15:10327921..10338387
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AA seq
1153 aa
AA seq
DB search
MKLSKMSHEREKSQRWDWDSPQCRAQLDEVFFRPHDYIQTGSTEHKEFWTFFERFQRFKA
KRDMSGSKSSRQESHEKKSSKKSASVDLGLPKDYDARYRINISVCSRDVEERLGRSDHKR
RRETSGPGSQEITDCRLALLHFLDFNQKQSFIKLAKLKREQKCLPIFQYRDRIVELVRTH
PVVVVAGDTGCGKSTQVPQYLMASGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGY
QIRFEASRTPATKLLFLTEGLLLRQIQHDASLGQYQVIIVDEVHERHLHCDFLLGVLRSL
LPLRADLRLVLMSATINIKLFSNYFNNAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLD
PRPYLRVLQGIDQRYPPEERGDLLLFLSGVAEISTIQEACQTYATHTQRWIVLPLHSTLS
LAQQDKVFDIAPAGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEF
WISRASSEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLVLQMKSMGLG
DPRAFVFIDPPPASSIQTAVTYLREQGALDEHGELTHIGRLLAQLPVDVVIGKMLVLGSI
FKLVEPVLTVAAALSVQSPFLRSAQHNPDCSTARQPLQSNQGDPFTLLNTFNAWVQVKKD
RGSGSRKWCKRRGLEEQRLYEMVNVRRQFKELLRSHGLLEDDTGGRSQPQDRAQRRKRLT
ERQKLHQLKRDHELQENTKRKVLRLEEGLEGDGSSGSDDEGTASNKKRKDEQTVDIQEVK
FKLRHNVNELQEAAHASADLSSRQQSLLKLVLCRGLYPQLAMPDEHNATRKDSEQVFHTR
NKQGVVIHPTSVFATDPEVLHVPEQECSEFGADKGQSNRHQLLAFVTLLETNKPYVSNCV
RVPALQALVLVANSVDTNADCTRVVVDGWLELGLSDGNTALKVLSSALTLRGEWERLLQA
QLGQAGSGSTAGLGLGGPKPSRRDLEKLCEGLVRFLLYTEVSYSLRRLTALQSQNLYVGP
QQDSELSSTSVLGSLFPGTKAEPDPIKGGLRVSHFFTYNCLCDSKDLYSECLRTFWSCPH
CDFYMPLTPLERMQHEATCRPAEEQQPEDEAESAKPSASSSSHLTRVYHCDICNKDLSLT
STEILKHKRQHLS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatcaaaaatgtcccacgagcgagaaaagagtcaacgctgggactgggacagt
cctcagtgtcgagcacaactggatgaggtctttttccgcccgcatgactacatccagact
ggcagtactgaacacaaggagttctggaccttctttgaacgctttcaaaggtttaaagcc
aaaagagacatgtcggggtccaaatccagcaggcaggaatcacacgagaaaaaatccagc
aagaagtctgcatctgtggatcttgggctccctaaggactatgatgccagatacaggatc
aacatttcagtgtgctccagagacgtggaggagcgtctgggaagatcggatcacaagagg
cgcagagagacctcaggtcctggcagccaagagatcacagactgccgtcttgccctcctt
cacttcctagatttcaaccaaaagcagagtttcattaagctcgccaagttaaaaagggaa
cagaagtgtctacccatcttccagtaccgggataggattgtggagctggtgagaactcat
ccagtggttgtggtggctggagacacagggtgtggaaagtccacgcaggttccgcagtat
ctgatggcatcagggttcagccacatagcctgtactcaaccacgccgcattgcttgcatc
tcgctggccaagagagtcagctttgagagccttaaccagtacggctccaaggtcgggtac
cagatccgctttgaggccagtcgtacccctgctaccaaactcttgtttctgactgagggt
ctgctgctcagacagatccagcatgatgcttcgctgggtcagtatcaggtgataatcgtg
gatgaggtgcatgagcgacacctgcactgtgacttcctgctgggagttctgcgttcactg
ctgccgctgcgtgcagatctgaggctggttctcatgtccgctaccattaacatcaaactc
ttctccaactactttaacaatgcacctgtactgcaggtgcctggtagactcttccccatt
caggtaatttaccagcctattcctccagaagagcaggtgtcccgctcggagaaactggac
ccgcggccgtacctgcgtgtgctgcagggtattgatcagcgctatccgccggaggagcga
ggtgacctgctgcttttcctcagtggagtggctgagatctctaccattcaggaggcctgt
cagacttacgccacacacacccagcgctggattgtccttcctcttcacagcaccctttca
ctggcacaacaggataaggtttttgacatcgcacctgcaggtgtcagaaaatgcatcatt
tctaccaacattgctgagacttcagtcaccattgatggagtgcgctttgtggtggattca
ggtaaagtaaaagagatgagttttgacccaaaggctaagatgcaaaggctccaggagttc
tggatcagccgggccagttcagaacagcgcaaaggacgtgcgggcagaaccgggccgggt
gtctgttacagactttacgctgagtccgactatgacgccttcgctccgtatcctgttcct
gagatccacagggtggcgctggactccctcgtactgcagatgaagagtatgggtctggga
gaccctcgcgctttcgtttttatagaccctccacccgcgtccagtattcagaccgcagtg
acgtatttgagagaacagggggcgctagacgaacatggagaactcacccatattggcagg
ctgttggctcaactacctgtcgatgtggtcattggaaaaatgttggttctgggttccatc
tttaaactggttgagccggtgctgacggttgccgccgcattgagcgttcagtctccattt
ttacgcagtgctcaacacaaccccgactgctccaccgcccgccagcccctgcagagtaac
cagggagacccttttaccctcctgaacacttttaatgcatgggtgcaggtgaagaaagat
cgaggaagtggctccaggaagtggtgcaaaagaagaggactggaggaacagaggctgtat
gagatggtcaacgtgagacgacagtttaaagaactgttgcgaagtcacggtttgctggag
gatgatacgggcggcaggtcgcaaccgcaggaccgagctcagcgcaggaagagactgacc
gagaggcagaagctacaccaacttaaacgagaccacgagcttcaggaaaacaccaagagg
aaagttctccgtctggaagagggactggagggagatggctcgtctgggtcagatgatgag
ggaacggcatcaaacaagaagaggaaagatgaacagaccgtggacatacaggaagtgaag
ttcaaattgcgtcacaatgtaaacgagctccaggaagctgcgcacgccagtgcagatctg
tcatcacggcagcagtctctgctcaaactggtgctgtgccgtggactctacccacagctg
gccatgcccgatgaacataacgcgacacgcaaagactctgaacaggtgttccacacacgt
aacaagcaaggtgttgtgattcacccaaccagtgtgttcgccaccgaccctgaagttctt
cacgtccctgagcaggagtgcagcgagtttggtgctgataaagggcagagtaataggcac
caattgctggcttttgttactttactggaaaccaacaagccttatgtgtcaaactgtgtt
cgtgttccagccctgcaggccctggtattggtcgctaactctgtggacactaatgcagac
tgcacacgggtggtggtggatggctggttggagttgggtttgagcgatggaaatacggcc
cttaaggttctctcctctgccctcactctgcgaggggaatgggagcgactgcttcaggcc
cagctcggccaggccggctcaggttccaccgctgggcttggactgggtggacccaaaccg
tcccgtagggacctggagaagctctgcgaaggtcttgtgcgatttctgctctacactgag
gtgagttacagtctgagacgactgacagcgctccagtctcagaacctgtatgtcggaccc
cagcaggatagcgaactctcctccacctcagtgctcggctctctgtttcccggcacgaag
gcggagccggatcccattaaaggaggcctgcgtgtcagccacttcttcacctacaactgt
ctgtgtgactctaaggacctgtatagtgaatgtctgcgtacgttttggagctgtcctcac
tgtgacttttacatgcccctgacaccattggagcgcatgcagcatgaggccacctgcagg
ccggcagaggaacagcagcctgaggatgaagctgaaagtgcaaagccttctgcatcgtct
tcatctcatctgaccagagtttatcactgtgatatctgtaataaagacctgagcctcacc
tcaacagagatcctgaagcacaaacgccagcacctgtcctga
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integrated database retrieval system
