Misgurnus anguillicaudatus (oriental weatherfish): 129420301
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Entry
129420301 CDS
T09481
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129420301 (tnrc6ba)
03036 Chromosome and associated proteins [BR:
manu03036
]
129420301 (tnrc6ba)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129420301 (tnrc6ba)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129420301 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
129420301
NCBI-ProteinID:
XP_055031103
LinkDB
All DBs
Position
17:complement(17784962..17808147)
Genome browser
AA seq
1985 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVVEQKNKVPELTKPPSAQSPATSNSVSPSPGPVPSSTPSAA
TPAASALPQGGNNAKRPAVANGQPSPSTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNESVASASDPSQGPVGPAAPSLPHTSSPSSIAASTSNYANSMWGA
SSGSQPLSQGREKVIVDRSDLKEWPSIAAGDGSKLGDTAGTGGADGSGILNCSASWGERH
PQQQAKVVGGGNGGRKGVNSDSPSPPTSSTSPNECMQSGSVWASSSHELIGGSAVAAGSL
PPISKAAPLVGNSDGSLGVSCGIPGANFTPNANPSAWPALVQDGAGAVATEGGSSSLQSS
SLSASNPLSVNQTSHQHQLHQMQSRDREPSCGEWGGTALEPGAGPKNTGVAEGAEMDSGS
TGGGDGSASSTSSTSSSLWRAQSFSANSKTGASRTESWEDGAGGSSISAEGGNAWGFTGK
DERGDLTGASAWGTGSGSQTSGVSQGAWGGDHKLVGEWGTSGGVGSVSNQGREDRSSSNS
SSSGGSVGNPTTSSSTPSTMTRAWDNQKGVGDVGAGESTEWGGQGSRGGGGTSSSSGGGN
SRSGNQRHGQHRFHQPPNPEVTLQNLLSRSDLDPKVLSNTGWGQTQIRQNVAWDLEGRGP
AAPSGGANSSSAMIAPALSQPYSTGSTGPSTTTDPSSSTLQGAPLNANLNSNSMLGPPAV
SPGEGWDNNSSSLHTRGPPPPGVNIQNLGVSQSGGGGGNSSGGQGKPSGGWGGSELQGKG
WDNEGHEWRDRRAGSVSGGWGDFQTQGTPASGWGDSQEEKGSESWKEMSRGDAGNWGQRS
SDWGDNEAKSSSGGWGDGKGSGVTSGDPEGSTWGNWDEGAPRGAWGAGGSRVSGDMGGKS
HQGWGGKMHPSQMPNSQSASQKGPAQQQQQSQPQQCQSLDTGAIQGGWGRQGGPSAQNQS
SGWTSGPIPQLSSGPGDSSEPSGWEEPSPQSISRKMEIDDGTSAWGDPSSYSSKGVNLWD
KNSAPSGQAQSASHQQGPPSMQQQPPGRVPTGPGNRDIPLTHSSSKGPGMAQSGWGNSGS
PSSPCVDNGTAAWGKPTEAPTGWGEPEDAGKVSSWGDPSSNPVKSGSKSMQEGWGEGEGS
VSASRHSSWEEEDESGGVWNSAGSQGSSSSYNSGGWAAKKGNKGPMKGAGDSWMNPMTRQ
FSNMGILGEDPNGRTLDLAPGPPQDKKMEGEKRGMGLNEYNGEMRKVGRGGGAGGVFRSP
GSKEVGACDPGPYYDKTGGQLFGSGGGMAQSRHQPGVPPINPSVRAQVPHQFLSPQVPGS
VLKPPPSGGVGGVGGGIFPPQLSPQHIAMLSSIYPPHIQFQLACQLLLQQQPQQQQQQQQ
QQQLLQNQRKFPPNIRQQPDPHQLARIMAVLQQQRQQQQQVGSAGGSSKLSPSHLGAGGP
KMPMSDPLSHPGLAGSVVDMHQKTQGTYSGFGPGVGLSGLELGPMVGGPPGPKDSGAQQS
RFKWMMEGHSPAPSPPDSALHKNGPIAAPLKMGGGSPYSQYEMLGGDGLGVPPQGPSDHW
HRSPGNKMGTKTGTSSWPPEFQPGVPWKGIPSVDPESDPYMTPGSMLSSSMSSLNDTEHQ
LLRDNTESNPTLNTLLPSPGAWPYSASESPLNNAHNPAKYTDYKPSWPPEPIGHNKPWKT
NRNSSHLPRPPPGLTHQKQPSASPWTGGAPRLGRGWGGSGGGQDTRFGPGSAWSDGGASR
GSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKAQSALHM
CVLGNTTILAEFVSEEEVARYFAHSQAGAGGSNSGASGTGAAVSGPAGVAGSSGAGAVGT
ISTGNAERERSGSSTAGGSNNSSGTGPSGSTWQSLDGTGSSPDPASSQGAGLSIFAQWSS
NGVGGSVGGNAGSVDPGRAGLWGGMTAGYTGSSLWGSPAMEDRHQLSSPAALLPGDLLGG
GADSI
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagacaaaaggaaacgggaaacctcacagaaggtt
gtagagcaaaaaaataaagtgccagaattgaccaagcctccatctgcacagtctcctgcc
acctccaactcagtttcccccagccctggccccgtcccctcatcaaccccatccgctgcc
accccggctgctagtgccctccctcagggtgggaacaatgctaagcggccggcggtggcc
aacggacagccctcccccagcacccagaactctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactg
tcctccatgctgctggggggaggcaacagcgggggagatagccccaatgaatcagtggct
tctgcctcagatccaagccagggccctgtgggtccagctgctccctcactgccccatacg
tcatccccctcatcaatcgctgcttctacttcaaattatgcaaattccatgtggggggcc
agctctggcagccagcccctctctcagggcagggaaaaggtgatagtggaccggtcagac
ctaaaagaatggcccagtattgctgctggagatgggtcgaaattgggggatacagcaggt
actggaggtgcagatggtagcgggattctgaactgcagcgcctcatggggtgagaggcat
cctcagcagcaagctaaagttgtgggaggagggaatggaggcaggaaaggagttaattct
gacagcccctccccacccacatcctccacttcacccaatgaatgtatgcagtctggtagt
gtttgggcttcatcctcccatgaacttatagggggaagtgcagtagcagcaggatcattg
ccccccatttccaaagctgcccctcttgtagggaactctgatggctcccttggtgttagc
tgcgggattccaggtgccaattttacccctaatgccaatccctctgcttggccagccctg
gtacaggatggggctggggcagttgcaacagaggggggctcctcttctctccaaagctca
tccttgtctgccagcaaccctctttctgtgaatcaaacctctcatcagcaccaacttcac
caaatgcaatccagagacagagagccatcctgcggtgagtggggtggcacagcactggaa
ccaggagcaggaccaaaaaacacaggagtggcagagggggctgagatggactctggaagc
acaggtggaggggatggctctgcttcctcaacctcctccaccagctcgtcattgtggaga
gctcagtctttctctgcaaactccaaaactggtgcctcaaggactgaatcttgggaggat
ggagcagggggaagctccatatctgctgaaggaggaaatgcatggggtttcactggcaag
gatgagcgaggtgatttgacaggagcaagtgcatggggaacaggaagtgggagtcagacc
tccggggtatctcagggagcatggggtggggaccataagttggttggggaatgggggact
tcaggtggagttgggagtgtcagcaatcaaggtagggaagatagatcaagcagtaacagc
agcagcagtggtggcagtgttggcaacccaacaacttcctcctccacaccttcaactatg
acaagagcttgggacaatcagaaaggagttggagatgttggggcaggagagtccaccgag
tggggaggtcagggtagcagaggtgggggaggtacatcatcttctagtggtggaggaaac
tctagaagtggcaatcagcgccatggccagcaccgttttcatcagcctcccaaccctgaa
gtgaccttacagaatctgcttagccggtctgacctggatcctaaagtgctctccaacact
ggctggggtcagacacaaatccgtcagaatgtggcttgggatttggagggacgaggacca
gcagcaccatcaggtggagctaattcctcttctgcaatgattgcacctgcccttagtcaa
ccatactctactggttctactggtccatctacaactactgatccatcttcctccacactg
caaggtgcacctctaaatgccaacttgaactcaaactccatgcttggaccaccagctgtc
tcacctggtgaaggctgggacaacaacagcagctctttgcacacccgaggccctccaccc
cctggtgtcaatatccaaaaccttggcgtctcacaatctggaggtggaggaggtaattca
tctggtgggcagggcaagccatctgggggctggggagggtcagaactccaaggtaaaggt
tgggacaacgaaggacatgagtggcgagatcgcagagcagggagtgtatcaggtgggtgg
ggagattttcaaacacagggtactccagcaagtggttggggagacagtcaggaagagaaa
ggatcagagagttggaaagaaatgagcaggggggatgcaggcaattggggacagagaagt
agtgactggggagataatgaggccaaatcaagcagtggaggttggggagatgggaagggg
agtggagttactagtggagacccagagggaagtacatggggtaattgggatgagggagct
cctagaggggcttggggagctggaggttcaagagtgagtggagacatgggtggcaagtct
caccaaggttggggtgggaaaatgcacccttcacaaatgccaaacagccaatcagcctca
cagaaaggcccggcacaacagcaacaacaatcacagccccagcagtgtcagtcactggac
acaggggccatacaagggggctggggaagacaagggggtccttcagcccagaaccaaagt
tcaggttggacttcagggcccataccacaactttccagtggtcctggagatagctcagag
cctagtggttgggaggagccttctccgcagtccattagcaggaagatggaaatagatgat
ggaacatctgcctggggtgaccccagcagctacagcagcaaaggtgtcaacttgtgggat
aagaatagcgccccatctggccaggcacaatcagcgtcccatcagcaggggcctccatcc
atgcaacaacagccgcctggaagagtgccaacaggccctgggaatagagacatacctctt
acacattcatctagcaaggggccaggaatggcacaatctgggtggggtaatagtggctct
ccttccagtccatgtgtggacaatggtactgcagcttggggcaagcccactgaagcaccc
actggttggggtgaacctgaagacgctggcaaagtgtcaagttggggagacccctcctcc
aatccagtgaagtctggttcaaagtctatgcaagaaggttggggtgaaggagagggttca
gtcagtgcttcacgtcactccagctgggaggaagaggatgagagtggtggtgtttggaac
agtgctggttcccaaggcagcagctcttcctacaattctggaggctgggcagccaagaag
ggcaacaagggtcccatgaagggtgcaggagactcttggatgaatcctatgacaagacag
ttctcaaacatggggattctgggagaggatcccaatggtcgtaccctggatctggcccct
ggtcctccacaggataaaaagatggaaggagaaaagcgtggcatgggtttgaacgagtac
aatggagagatgcgtaaagtaggacgtggagggggagcaggaggagtcttccgttcacct
ggttccaaagaggtgggggcttgtgatcctgggccttactatgacaagacaggtggtcag
ttgtttggtagcggaggtgggatggcacaatccaggcaccaaccaggggtgccacccatc
aacccatctgtacgagcgcaagtgcctcatcagttcctgtcacctcaggtgccaggctct
gtgctgaagcctcctcccagtggaggtgtgggaggtgttgggggaggcatctttcctcca
cagctttctccacagcacattgccatgctcagcagcatctacccccctcatattcagttc
cagctggcttgtcaactgctactgcaacagcaaccgcagcaacaacaacaacagcagcag
cagcagcagctactccagaaccagcgcaagttccctccaaatatacgccaacaaccagac
ccccatcagcttgccagaattatggctgttcttcagcagcagagacagcaacaacagcag
gtgggaagtgcagggggcagctccaaactctctccttctcaccttggtgcaggtgggccg
aagatgcccatgtcggaccccttgtcacatcctggcttagcaggctctgtagtagacatg
catcaaaaaacacagggcacttattctgggttcggacctggtgttggcctttctggtctt
gaactgggtccaatggttggcggcccacctgggcctaaagacagtggagcccaacagtct
cgttttaaatggatgatggaaggtcactcaccagccccctcccctccagatagcgcactc
cataaaaatggtcctattgctgctcctctcaaaatgggaggtggttctccatattcccag
tatgagatgctgggaggtgatggtttgggtgtgcctccacaagggccatcggatcactgg
catagaagtcctggaaacaaaatgggcaccaagactggcacatccagctggcctccagaa
tttcaaccaggagtgccttggaaaggtattccgagtgtagacccagaatctgatccctac
atgactcctggaagtatgctgagctcatcgatgtcaagccttaatgacacagagcaccaa
ttgctaagagataacacagaatcaaatcccaccctcaacaccttgctgccttcacctggt
gcctggccctacagtgcctcagagagccccctcaacaatgcacacaacccagctaagtac
acagactacaagcccagctggccacctgagcccataggacacaacaagccttggaagacc
aatcggaacagctcgcatctgccacgcccacctcctggactgacccatcagaaacagccc
tctgcgtctccctggacaggaggagccccgcgattgggtagagggtggggaggctcagga
ggcggccaggataccagatttggccctggttctgcgtggagtgatggaggagcctctaga
gggagctgctggctactgttaagcaatcttacccctcagatcgatggctccaccttacgg
acaatatgtatgcagcacggaccgttgttgacctttcacctcggtctgacccaaggtagt
gctctgattcgctacagtactcgccaagaagcagccaaagcccagagcgcacttcatatg
tgcgttttaggtaacaccacaatcctggccgagtttgtgagcgaggaggaggttgctcgt
tattttgcacattcccaggctggagctggtggaagcaacagcggagcgagcggaaccggt
gccgctgtctccgggccagcgggcgttgcggggtcatcgggggcgggtgcagtgggtacc
atcagcactgggaatgccgagagagaacggtctggaagttcgacagcgggaggaagtaac
aacagcagcgggactgggccctcgggctccacctggcagagtttggacggtacaggcagc
tccccggacccagcctcttcccagggagcaggcttaagcattttcgctcagtggagcagc
aatggtgttggcggtagtgtgggcggcaacgcggggagcgtcgatcctggcagagcgggg
ttgtggggcggcatgaccgcagggtatacgggcagcagtttgtgggggtctccggctatg
gaagatcggcaccaattgagcagccctgcagcactgttacctggagacctgctaggggga
ggggcagactctatctga
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