Misgurnus anguillicaudatus (oriental weatherfish): 129420577
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Entry
129420577 CDS
T09481
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129420577 (rnf40)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129420577 (rnf40)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
129420577 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
129420577
NCBI-ProteinID:
XP_055031537
LinkDB
All DBs
Position
4:23755449..23786228
Genome browser
AA seq
1008 aa
AA seq
DB search
MSKKGSMSGTGAGKRPSGGDSPPGPPEKKTKKEEKTTTTLIEPIRIGGVSSTEEMDMKVI
QFKNKKLYERLEQRQALEDELREKIEKLEKRQATDDTTLLIVNRCWTQLEENIHDLLQLV
EPKETSAPVQTPATPPVPADVALPAAPAPSPAPEPSTPLPAPVEGEDGLPQPPSTAEGVE
EEPKQPEQVKEQEQAQQQLETEEKPPEKPKDGISAPPPPLSESAKAFLATLDNSSEEELT
LQLQDRMQFSKGAVACMVCIFDRLHSSIEELCARVESAVCEDDSQREIIATNRKLLEENN
RLQDLASSLQGRHHKMSLEYNELVDKVTSSETKVSEMETAVEDLQWDIEKLRKREQKLNK
HLAEALEQLNSGYHATGSSGGLPGGQITLTIQKFESLNAELEQNQELANSRMAELEKLQQ
ELQEAVRESEKLKMDLRNIPEEVLKETPEYKCLQSQFSLLYNESLSVKTQLDEARALLLT
AKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGP
INREMRHLISSLQNHNHQLKGDVQRYKRKLRETQMEINKLKCQSGDAGALLLDESVGDGG
LEVKKEEDEDQDEEEERRRELERQRAREREREIERERERERERERQRTEEMKRKDSDTLK
MLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEKKSKAEVDELRQRVRELEER
EKKESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNS
RLMQQLREKDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLLVVQKLEE
KEGVLQSTLAALEKELGLRTQALELNKRKAVEAAQLAEDLKVQLEHTQTKLREIQASVLD
NRTARERESANLKRAQEDLSRLRRKLEKQKKVEVYTDADEILQEEINQYKAKLRCPCCNT
RDKETVLTKCFHVFCYECLKTRYDTRQRKCPKCNAAFGANDFHRIYIT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaagggaagcatgtctggaactggggctgggaagcggccctcaggaggggac
agtcccccgggcccacccgaaaaaaagaccaaaaaggaggagaagactactacaactctc
atagagcccattcgcattggaggagtttcttccacggaggagatggacatgaaggtcatt
cagttcaagaacaagaagctctatgagcgccttgaacagaggcaggctttggaggatgaa
ttgagggagaagattgagaagctggagaagaggcaggccaccgatgacactaccctgctt
atcgtcaaccgttgctggactcagctggaagaaaatattcatgacctgttgcagctggtg
gagcctaaagaaacctcagcacctgtccagactcctgccacacctcctgtccctgcagat
gtggctctccctgctgctcctgccccatcaccagcccctgaaccctctactcctttacca
gctccagtggagggagaggacggcctcccccagcctccatctacagctgagggggtggag
gaggaaccgaaacagccagagcaggtgaaggaacaggagcaggctcagcaacagctcgag
accgaggagaagccacctgaaaaaccaaaggatggcatttccgcccctccaccacctctc
agtgaaagtgcaaaggctttcctggctactctggataacagtagtgaagaggaactcact
ctgcagctgcaggacagaatgcagttcagcaagggggccgtagcctgcatggtctgcatc
tttgaccgtctgcacagtagcattgaggagctgtgcgctagagtagaatcagcagtttgt
gaggatgacagtcagagagagataatcgccacaaaccgcaaacttctggaggaaaacaat
cggctacaagaccttgcatcctctcttcaggggagacatcataaaatgtcattggagtat
aatgaactagtggacaaagttacaagttcggagactaaagtgtctgagatggagactgct
gtggaggacctgcagtgggacatcgagaaacttcgtaagagagagcagaagctgaataaa
catctagcagaagctctggagcagcttaattcaggttatcatgccactggcagttctggc
ggattacctggtggtcagatcacacttactatacaaaagtttgagtctctgaatgcggag
ctggagcaaaatcaggagctggccaacagccgtatggcagagcttgagaaactacagcaa
gagctacaggaagctgttcgggagagtgaaaagctaaagatggatcttcgaaacataccc
gaagaagtcttaaaggagacacctgagtacaagtgcctccaatcacaattctctctgctg
tacaacgaatctctgagtgtaaagacccagctggatgaagctagagctctactgctcact
gccaaaaatgctcatctgcggcagatagagcacatggagagtgatgagttgtctcttcag
aaaaagttacgaactgaggtcattcagctagaagatacactggcgcaggtccgaaaggaa
tacgaaatgcttcggattgagttcgaacagaacctcgcagccaatgagcaagcaggccca
ataaacagagagatgagacacttaatcagcagtctgcagaaccacaatcatcagcttaaa
ggggatgtgcagagatataagaggaagttacgtgagacacagatggaaattaacaagttg
aagtgccagagcggagatgcaggcgcgctgctgttagacgaaagcgtgggtgatggagga
ctggaggttaagaaggaagaagatgaagaccaggatgaggaagaagagaggaggagagag
ttggagaggcagcgagctcgggagagagagagggagattgagcgagagagggagagagaa
agagagcgcgagagacagcgcacggaggagatgaaaaggaaagactctgacacgctgaag
atgctcagagcagagctcaagaaagctcaagagtctcagaaggaaatgaaactattgcta
gacatgtacaaatcggctccaaaagagcagcgggacaaagtgcaactcatggcggcagaa
aagaagtccaaagcggaggtggacgagttgaggcagagagtgcgagaactagaggaaaga
gaaaaaaaggagagcaagaaactggcagatgaagatgccctccgcaagatacgcgtggct
gaggagaccatcgaacacttacagaagaaactggctgctacgaaacaggaggaagaagct
ctgctgagtgaaatggacgtaacgggacaggcgtttgaagacatgcaggagcagaacagc
aggctcatgcagcagctcagagagaaagatgatgccaacttcaagctcatgagcgaacga
atcaaatccaaccaaatttacaagctactgcgggaggagaaggaagagcttgcagatcag
gtgctcacgttcaagacccaggtggacgcgcagctgctggttgtgcagaaactagaggaa
aaagagggcgtcctgcagagcacgttggctgctttggagaaggagcttggactgcgcacc
caagcgctagaactcaacaaacgcaaggcggtggaggcagcccagttggcagaagacctt
aaagtgcagctggagcacactcagaccaagttgagggagatccaagcctcggtgttagac
aaccgtactgcccgtgagagggagagtgccaaccttaaaagggcacaggaggacttgtcc
agactgcggcgtaagctagagaagcagaagaaggtcgaggtgtacacagatgcagatgag
atcctgcaagaagaaatcaatcagtataaggctaaactgcggtgtccttgctgtaacacc
cgggacaaggagaccgtcctcaccaagtgtttccacgtcttctgctacgaatgcctgaag
acccgttacgacacccgccagaggaagtgccccaaatgcaacgccgctttcggtgcaaat
gacttccaccgcatctacatcacctaa
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