Misgurnus anguillicaudatus (oriental weatherfish): 129420790
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Entry
129420790 CDS
T09481
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129420790 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129420790 (msh2)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129420790 (msh2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
129420790
NCBI-ProteinID:
XP_073723069
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Position
4:complement(21189983..21198265)
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AA seq
938 aa
AA seq
DB search
MAVQPKQNLSMDSVSEKAFLNFYFSMPEKPDTTVRIFDRNDYYTVHGKDALFTAKEVFKT
NGVIKNLGAGNRKLESVVLNKMNFESFVRDLLLVRQYRVEVYRNSATKSSKDHDWQLSFK
ASPGNLTQFEDILFGSGVGPGEAAAGVVGVRLGTGSDGQRVVGVGYVDITLRKLGVCEFP
DNDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLRQVVQRGGVLLTDRKKSEFTTKDIVQ
DLNRLLKGRKGETVSSAALPEMEKQIAMSCLEAVIKYLELLSDEGNFGTFKISTFDLNQY
MRLDNAAVQALNLFQGSSDDTTGTHSLAGLLNKCRTPQGQRLVNQWIKQPLRDKSKIDER
LDLVESFVDDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQAVGQLPGLVL
ALERYSGKHQVLLHAAFISPLSDLINDFSKFQEMIETTLDMNQIDHHEFLVKPSFDPTLS
ELRENMDRLEKAMQAALNSAARELGLEAGKTVKLESNAQIGYFFRVTCKEEKSLRNNKKF
TTLDVQKNGVRFTNSKLSSLNEEYTKSKEEYEEAQNAIVKEIVSIAAGYVDPVQTLNEVI
AQLDAVVSFAVVAHAAPVPYIRPKILEKGSGKLILKGARHPIVEAQDDVAFIPNDVTFSR
GAEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCILARVGAGDCQI
KGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCL
FATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKRGVCDQSFGIHVAELANFPKH
VIANAQAKALELEEFQEFSRAEEEGSDAGPEAKKRCLERQEGEKMIEAFLAKVKALPADD
MTDDAVKEKLRKLRAEVSAKNNSFVNEILSHIAKVKHT
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagcgtttcagaaaaggcatttctg
aatttttatttttctatgcctgagaaacctgacaccaccgtgagaatatttgatcgaaac
gattactacacggtgcacggaaaagatgcgctttttacagccaaggaggttttcaagacg
aatggtgtcatcaaaaacttgggcgcaggcaacagaaagctggagagcgtggtcctcaat
aagatgaattttgaatcatttgtgagagacctgcttttggtcagacagtacagagtggaa
gtttacagaaatagtgccactaaaagcagcaaagatcatgactggcaattatctttcaag
gcatctcctggtaacctgacacagtttgaggacatcttatttggcagtggagtaggacca
ggggaggcagctgctggtgtcgtgggggtgcgtcttggcactggaagtgatggacaacgg
gtggtcggtgttgggtacgtggacattactctaaggaaacttggtgtgtgcgagttcccg
gataatgatcagttctccaatctggaggctttgctcgtgcagatcgggcctaaagagtgt
gtgcttcctggaggagatgcaggtggagaccttggcaaactcagacaggtggtacagcgt
gggggtgttctgctcacagacagaaagaaatcagagttcacaaccaaagacattgtgcag
gacctaaatcgtctacttaaggggcgtaagggagagactgtgtccagtgctgcccttcca
gagatggagaagcagattgccatgtcttgcttagaagcagtcatcaaatacctggagctc
ctctcagatgagggtaacttcggtaccttcaagatatctacatttgacctcaaccagtac
atgcgtttggataatgctgctgtgcaagcactgaatctctttcagggttcatctgatgat
acaacaggcactcattctctggcaggtcttttaaacaaatgccgtaccccacaaggacag
cggctggtcaaccagtggatcaaacagcctcttagagacaaaagcaaaatagatgaacga
ctggatcttgtggagagttttgtggatgactctgagctgaggaagagttgtcaagaagat
cttctccgccgttttccagacctaaaccggatggcgaaaaagtttcagcgtcagagctct
aacttacaggactgttaccgtgtctaccaagctgttgggcagctgccgggactggtattg
gctttggagagatacagtggaaaacatcaggtccttttgcatgcagcattcatttctccc
ctcagtgacctcatcaatgacttttccaaatttcaggagatgattgaaactacgctagat
atgaaccagattgaccatcatgagtttctggtaaaaccttcatttgatcccactttaagt
gagctcagggagaacatggatcgcttggagaaagctatgcaggcagccttaaacagtgca
gctcgtgagcttgggttggaagcaggcaaaaccgtcaagctggagtccaatgctcagatc
ggttacttcttccgagtcacatgcaaagaagagaagagccttcgcaacaacaagaaattc
acaactttagatgttcagaaaaatggagtgcgctttactaacagtaagctgagctctttg
aatgaggaatacactaagagcaaggaagagtatgaagaagctcagaacgccattgtcaaa
gaaatcgtcagcatcgccgctggttatgtggatccagtgcagaccttaaatgaggtgatc
gctcagctggatgcagtggtgagctttgctgtggtggcacatgctgccccggtgccttat
attaggccaaaaatactagagaaaggatcaggcaaactcattctaaagggtgcaagacat
cctattgttgaagcccaggacgatgtggctttcattcccaatgatgtcactttctcaagg
ggtgcagagatgtttcatatcatcacaggtcccaacatgggcggcaagtccacttacatc
cgtcaagtaggcgtgattgtcttgatggcacagattgggtgctttgtgccatgtgacgag
gcagaattgagtgtggtggactgtatacttgctcgagtgggcgcaggggactgccagatc
aaaggagtgtccactttcatggctgaaatgctggagactgctgctattctccgatcagcc
acagaggattctctcattattattgatgaattgggcaggggcacatccacatacgatggc
tttggtttggcctgggcaatctcagagtacatagccactcgcctcaagtctttctgcctg
tttgccactcacttccatgagctgacggcgttggcgcaacaggtgcccactgtccgtaac
ctccatgttactgccttgaccacagacagcactctcacaatgctctacaaagtcaaaagg
ggtgtttgtgatcagagctttgggattcatgtggcagagctcgctaacttccccaagcat
gtgattgcaaatgcacaggctaaggctttggagcttgaggagttccaggaattctccaga
gctgaggaggaggggtcagatgctggacctgaagccaaaaaacgctgtcttgagagacag
gagggggagaagatgattgaggcttttctggctaaggttaaagcacttcctgctgatgac
atgactgatgatgctgtcaaagagaaactgcgcaagctgcgggcagaagtcagcgctaag
aacaatagctttgtcaatgaaatactgtcacacattgccaaagtcaaacatacttga
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