Misgurnus anguillicaudatus (oriental weatherfish): 129420803
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Entry
129420803 CDS
T09481
Symbol
abca5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129420803 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manu02000
]
129420803 (abca5)
Transporters [BR:
manu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129420803 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
nSTAND1
Motif
Other DBs
NCBI-GeneID:
129420803
NCBI-ProteinID:
XP_073723240
LinkDB
All DBs
Position
4:30980313..31008315
Genome browser
AA seq
1674 aa
AA seq
DB search
MYFIPVSDTCGSQLNNAGRMQPVSKRDAGVWHQTRSLLYKNLLIKWRTKQQSLQELILPL
LLLGLLILISMLNPHVSYGSIDTKELDHEHDLPIKGLGYTPISNVTNHIMEEVARELPMN
ELRLDMFSTEEDLENASLYEPNGYVGVVFLDSMSYRLRFPYSELPLPSDFTESITSCYTN
YRNCRAANYWYSGFVRLQSLIDAAIIQMQTKRSVGNELKVRAVMMGHPGSVEVQKFPHAL
ISIYLVVAFTPFVSFLIVNVAAEKEQRLKDTMGMMGLYDSAFWLSWGLLYAVLVTTMSIL
MAVIATCTPLFSNSNFFVIFLLIFLYGISSIFFSFMLTPLFKKPKFASTVGSTLTVVFSC
LSLFTVLMRDFPQPVVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLRDGPHALYVPM
VMLFLDCILYLLLAIYLDQVLPGEFGTRRSMMYFLQPSYWSKKRKHYVEVSSVFEGDVNG
APVIDESAETVSPEFRGKEVIRICNIRKVYKDKDITVEALRGLTFDIYEGQITALLGHSG
AGKSTLMNILCGICPATEGTATIYGSPVAEIAEGAEMKQLVGICPQFNIIFDVLTVQEHL
RIFAAIKGILPSDIDGEVRKVLKDLDLEKIMDAQAKNLSGGQKRKLSVAIAILGDPKILL
LDEPTAGMDPVSRHQVWSLLKSRKAGRVTVLSTHYMDEADILADRKAIISQGQLKCIGSS
LYLKTKCGVGYHLRMSVTEGCEVERVTSLVKQHVPKAQLSRQQEAELTFTLPFESMETFP
GLFAELDCRPDLGVTNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNHEKVEEEGDASSLD
DIDQRLLTFSDSRQDAVTSRALWRQQFSTVAWLHMLNLQREKKPIIYNVTLYLVFLSGVL
ILSLATGNIQIHSPERLFSPIYLLHRNEAPRKYATSLLVQNSTDSDLSGFIRNVENQDIK
VEMMRKPDYMSSAPVSAAINVTGSSKDHTYILAFNSTTVHSLPMAVNVLSNALLRGFNGS
GRIKTWSKPFDYQIPDTTSYVLIYIESILLGMLAAGMSAYFAMDHTKDIELKCRSTLRIS
GLVPSAYWCGQAAIDVPFYYLILICMTSTLFAFHSTNLLTAHNVMVVALCVIGFSPAMVL
FTYCVSFLFVKVQSNRDFFSVVSMMICILSASIVQLALVNQDEGLAQILHNALCFLSPLY
PLMGCLTCITVATFLQSTHEVDFLWTNLFISVIAPYIQCILLIIILRWLEMTYGGKTMKN
DQLCRISSKTKDKVQKNPDENVSEDEDVQVEKARVKEALTCQCCEEKPVVVVSELRKQYK
GKREGFSLTKRRQVATKNVSFCVRKGEVLGLLGPNGAGKSTIMHLLSGDLEPTAGQILMG
DYGTDFQPTENPLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLHEHDIPNIIKRVVKAL
ELKDHLHKQTKNLSAGLKRKLCFALSMLGNPQIVLLDEPSTGMDPKSKQRMWRAIRAAFK
NKQRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGRGYSLEINLREELTG
LQQADLLHKEILKIFPHAARQDSFATLMVYKIPMEDVKSLAKAFSQLESAKQNFNFEEYN
FSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQDGSVSINHADSVVHQL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgtattttatccctgtgtctgatacatgtggcagtcagctgaataatgctggaagaatg
cagcctgtaagtaaaagagatgctggagtttggcatcagacgagaagcctgctctacaaa
aacctgcttatcaaatggaggaccaaacaacaaagtcttcaggagctgatcctgcccttg
ctcctcttgggtcttcttatcctcatcagcatgctcaatcctcatgtgtcttatggcagt
attgacaccaaagagctggatcatgaacatgacctgccaatcaaaggtctcggttacacc
cccatcagcaacgtcaccaatcacattatggaagaggttgcacgggaactgcccatgaat
gagcttcggttggatatgttttctaccgaggaagatttggagaatgccagtctctatgaa
cccaatggttatgtgggggtggtctttctggactccatgtcataccgtcttcggttccca
tacagtgaacttcctcttcctagtgattttacagagtccataacaagttgttacacaaac
tatagaaactgccgtgccgccaactattggtactctgggttcgtacgcctgcagtccctg
attgatgctgcgatcatacagatgcaaaccaagcgttcagtggggaatgaattaaaggtg
cgtgctgtgatgatgggacatccaggttctgtggaggtccagaagttccctcatgccctt
atctccatctatttggtggtggcatttacgcctttcgtctcctttctcattgtcaatgtg
gccgctgaaaaagagcagagactcaaagacaccatgggcatgatgggattgtatgattct
gcattctggctttcgtggggtctcctctatgctgtgctggtgacgactatgtccattctt
atggctgttatagcaacctgcactccactcttctccaacagcaacttctttgtcatattc
ctgctaatttttctctatggaatatcctctattttcttctccttcatgttgacgcccctg
tttaagaagcccaagtttgcgagtacggttgggtccacactgacggtggtgttcagctgt
ctgtctctcttcactgtactgatgagagattttcctcagcctgttgtctggctcctctgc
cttctttctcccagcgcgttctccattggtatcgcccaggtggtgtatttggaagctcag
ggtgatggggcagtgttctcctctttgcgcgatggtcctcacgccctctatgttccaatg
gtcatgctatttttggactgcattctctacctgctattagccatttacttggaccaggtg
ctgccaggtgagtttggcacacggcgctcaatgatgtacttcctgcagccgtcctattgg
tcaaagaaaaggaagcactatgtggaggtgagctctgtctttgaaggagatgtgaacgga
gctcctgtgattgacgagtcggcggagaccgtttctcctgagtttagaggcaaagaggtc
atcagaatctgcaatatccgtaaagtctacaaagataaagacatcacggtggaggcactg
agaggtttgacttttgacatctatgagggtcagatcacagccctgctcggacacagtgga
gcgggcaaatccaccctaatgaacattctttgtggcatttgccctgcaacagaaggcaca
gccaccatctatggctcccctgtggcagagatcgcggagggagctgagatgaaacagctg
gtcggtatatgcccccagttcaacatcatctttgatgtgctcaccgtacaggaacacctg
aggatttttgcagccatcaaagggattctgccctctgatatcgacggcgaggtaaggaag
gttttaaaagatttggatttggaaaaaattatggatgcccaggcgaagaacctgagtgga
ggccagaagaggaaactgtcagtggcaatagcaattcttggtgacccaaagattcttctt
ctggacgagccaacagctggtatggacccagtgtctcgtcatcaggtttggtcattactg
aagagccgtaaagcaggcagagttactgtactcagcactcattacatggatgaagcagat
atacttgcagatcgtaaagcaatcatctctcaagggcagctaaaatgtattggctcatct
ttgtacctgaagaccaagtgtggagttggttaccatcttaggatgtcggtgactgaaggt
tgtgaggttgagagagtcacatcactggtcaagcagcatgttcccaaggcacagttgtca
cggcagcaggaggctgagctcacgttcacgttgcctttcgagagcatggaaactttccca
gggctttttgcagaactggactgtcggcctgacctaggtgtcacaaactacggtgtctcg
atgacaacattagaagatgtattcttgcgtctggaggcagaggcggaggtggatcaggcc
gactacagtgtgtttaaccatgagaaggtggaagaagaaggagatgcctcatctctggat
gatatagaccaaaggctgcttactttctcagacagcagacaggatgcagtaacctcccgt
gccctctggaggcagcaattcagcacggtggcctggctgcacatgcttaacctgcagagg
gaaaagaagcccatcatttacaatgtcaccctatatctggttttcttgtcgggagtgctt
attttgtctctggccacaggaaacattcagattcactctcccgaaagactgttttcgccc
atttacttgttgcatcgcaacgaggctcctcgcaaatacgccacaagtctgcttgtccaa
aattcgaccgattctgacctgtcagggttcatccgtaatgtagagaatcaggacattaag
gtagaaatgatgagaaaaccggattatatgtcttctgcacctgtgagcgccgccatcaat
gtgacgggatctagtaaggatcatacatacattttagcatttaacagtaccacagtgcac
tctctacccatggctgttaatgtgctcagtaatgccctcctgagaggctttaatggctcc
ggacgcatcaaaacgtggagcaagcctttcgactaccaaatcccagacacaacttcctat
gttctgatctacattgagtcaatccttctgggaatgctggctgctggaatgtctgcctat
tttgcaatggaccacacaaaagacatagagctgaagtgtcgctcaaccctgaggatctct
ggtctggttccgtccgcatactggtgcggtcaggcagctattgatgttcccttttattat
ctcatcttaatctgtatgaccagcactctctttgctttccattccacaaaccttctgacc
gcccataacgtcatggtcgtggctctttgtgtgatcggtttctctccagccatggttctc
ttcacatactgtgtgtccttcttgtttgtcaaagtccagagcaacagggacttcttctcg
gtggtctccatgatgatttgtatactttctgcatccatagtccagttggctcttgtgaac
caagacgaaggtctggctcaaatcctgcacaatgcgttgtgtttcctcagtccactttac
cctcttatgggctgccttacatgcattaccgtggccaccttccttcagtctacgcatgag
gtggatttcctgtggacgaacctcttcatctctgtaatcgctccgtacatccagtgtatt
ttgctgatcatcattctgagatggttggagatgacttatggagggaagaccatgaagaac
gaccagctatgcaggatttcctcaaaaacaaaggacaaagttcagaagaacccagacgag
aacgtaagcgaggatgaggatgtgcaagtggagaaagccagagtcaaggaggcgttgacc
tgtcaatgctgtgaggaaaaaccagtggtggtggtgagcgagctgaggaagcagtacaaa
ggaaagagagaaggcttctcgctcaccaagagaagacaagttgccaccaagaacgtctct
ttttgcgttcgcaaaggtgaggttttgggtttgttgggtccaaacggagctggaaagagc
accatcatgcatttgctgtccggagacctggagcctactgctggacagatcttgatgggg
gattatggcacagactttcagccaacagaaaaccccctggagcatgtaggttactgtcct
caagtgaaccctctgtggcctagaatcacccttcaggaacacctggagatctatgctgcc
atcaaggggctacatgaacacgatatcccaaacatcattaagcgtgttgtgaaggctcta
gagctgaaggatcatcttcataaacagaccaaaaacttgtctgcaggactaaagaggaag
ctgtgcttcgcactaagcatgctgggaaatcctcaaatagttctattggacgagccgtct
acagggatggatcccaaatcaaagcaacgcatgtggagggcgatccgtgccgcctttaag
aacaagcaacgaggggcacttttgaccacccattacatggaggaggcagaggctgtgtgt
gaccgtgtggctatcatggtttcaggtcaactacggtgtattggttccattcagcacctg
aaggggaagtttgggagaggttacagcctagagataaatctcagggaggagctcacaggt
cttcagcaagctgatctgttgcacaaagagatactgaagatatttccccatgctgctcgt
caggacagttttgccaccctgatggtgtataaaatcccaatggaagatgtgaagtcacta
gccaaggctttttcccagctagagagtgctaaacaaaactttaactttgaagagtacaac
ttctcccagtcaactcttgaacaagttttcatggagttcgcaaaagagcaagagaatgag
gaagaagaggtgggctctctcagcacaacctttcaatggcagaggctgagacaggatggc
tcagtgtccatcaatcacgcagacagcgtagtacaccagctatga
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