Misgurnus anguillicaudatus (oriental weatherfish): 129421100
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Entry
129421100 CDS
T09481
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129421100 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129421100 (smarcd2)
03036 Chromosome and associated proteins [BR:
manu03036
]
129421100 (smarcd2)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129421100 (smarcd2)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129421100 (smarcd2)
PBAF complex
129421100 (smarcd2)
GBAF(ncBAF) complex
129421100 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129421100
NCBI-ProteinID:
XP_055032378
LinkDB
All DBs
Position
4:10818286..10837725
Genome browser
AA seq
484 aa
AA seq
DB search
MNPMNPGHSSGMRMQAMPQNSPYRGMASTPNQYHQRPSMPPSRGLPMGGMGSMGSPMPGP
SYSGGMPMRPGMPQAQMDPTRKRLLQQQQPGGLMGPRRGVKRRKMADKVLPQRIRDLVPE
SQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPAKPEGEEAEKV
ASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQ
VKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWLYIKNNKLQDC
HEKEYINCNRYFRQIFACPRMRFSDIPMKLASLLQHPDPIVINHMISVDPNDQKKTACFD
IDVEVDDPLKAQMTSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFMLSFSNNPQDF
IQDWLKSQSRDLKLMTDTVGNPEEERRTEFYHSPWVTEAVGRYVFSKVQQRRQELEQVLG
IRLT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatgaacccgggtcacagcagcggcatgagaatgcaagcaatgcctcagaat
tcaccctacaggggtatggccagcaccccgaaccagtaccaccagcgcccaagtatgcca
cccagccgaggattaccaatgggaggcatggggtctatgggctcccccatgcctggtcca
tcttatagtggaggcatgcccatgcgacccggaatgcctcaggcccagatggaccccact
cgaaaaagactccttcagcagcagcagcctggtggtcttatgggccctagaaggggagtt
aagcgacgtaagatggctgacaaagttctcccacagaggatcagggatctggtcccagag
tctcaggcttacatggaccttttggcctttgagagaaagctggaccagactattgctcgc
aaacgcatggagatacaggaagccattaagaagcctatcacgcaaaagcgaaaactgagg
atttacatttccaacacgtacacacctgccaaaccagaaggggaggaggctgaaaaagtg
gcatcgtgggaacttcgagtggagggcaaactcttggaagaccctgggaaacagaaaaga
aagttttcatccttctttaaaagccttgtcattgaactggacaaagaactttatggccca
gacaatcatctggtggagtggcacagaatgcccacaacccaggagacggacggctttcag
gtgaagagaccaggagatgtgaatgtgaaatgcactcttctgctcatgctggaccaccag
cctccacaatataaactggatcctcgtctggctcgacttttgggtgtccacactcagacc
agagcgagtatcatgcaggccctgtggctttacatcaaaaacaacaagctacaggactgc
catgagaaggagtacattaactgcaatcgatacttcagacagatttttgcctgtcccagg
atgaggttttctgatatcccaatgaagctcgccagcctcctccagcaccctgatcccatt
gttatcaatcacatgatcagtgtggatcccaatgaccagaagaagaccgcctgctttgac
atcgatgttgaggtggacgacccgctgaaggctcagatgaccagcttcctttcatctaca
accaatcagcaggaaattgctgcccttgagatgaagatccacgagactattgaatctata
aaccagctgaagacccagagagacttcatgctaagcttcagtaacaacccacaggatttc
atccaggactggctcaaatctcagagccgagaccttaagctgatgacggacactgtcgga
aacccggaagaagagaggagaaccgagttttaccactcaccctgggtcacagaagctgtt
ggacgctatgtattttcaaaggtccagcagaggagacaggaattggaacaggtactggga
atccgactcacataa
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integrated database retrieval system
