Misgurnus anguillicaudatus (oriental weatherfish): 129421393
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Entry
129421393 CDS
T09481
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manu03016
]
129421393 (trub1)
Enzymes [BR:
manu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
129421393 (trub1)
Transfer RNA biogenesis [BR:
manu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129421393 (trub1)
Prokaryotic type
129421393 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
129421393
NCBI-ProteinID:
XP_055032872
LinkDB
All DBs
Position
4:complement(24475632..24478104)
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AA seq
288 aa
AA seq
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MADMATVPNGSLSKLQSLNGIFAIYKKQGPTSADVLNSLKKTLLKEAGVANPNPRKRKKQ
PLKIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYIAVGELGKATDTLDATGNVIE
EKNYDHITKEALEEKFKQFTGEIMQVPPLYSALKKDGKRMSVLLKQGQEVEAKPARPVTV
YNLTLQDFSPPLFTIDVECGGGFYVRSLVDELGKALSSCAHIKELTRTKQGQFTLEEHAL
KEDRWTLTDISQALQPCPKPAGKQKNESKKSKDKQPPSKSDDGDQNSE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatggcaactgtaccaaacggttcattatccaaactgcagtctttgaatggc
atatttgccatttataagaaacagggccccacatcggcagatgtgctaaattcactgaag
aagacgcttttaaaagaggctggtgttgcaaatccaaacccccgtaaaaggaagaaacaa
cctcttaaaattggccatgggggcactctggatagtaatgcatctggtgtacttgtggtg
ggaattggtgaaggaacgaagatgctcaccacaatgcttgcaggatcaaagaaatacatc
gctgttggagaattaggcaaagcaaccgatactcttgacgccacaggaaatgtcattgag
gagaaaaattatgatcacatcacaaaagaggctttggaagagaagtttaagcagtttacg
ggggaaataatgcaggttccacctttatactcagccctgaaaaaggatggcaaacgcatg
tccgtcctgctaaagcaaggtcaggaggtcgaggctaaacctgcacgtccggtgacagtc
tacaatctcacattgcaagacttcagtccgccacttttcacaatagatgttgaatgtgga
ggtgggttttatgtcagaagtctggtcgatgagctaggaaaagccctgtcatcttgcgct
cacataaaggaactgaccagaaccaagcaaggtcagttcaccttggaggagcatgcattg
aaggaggatcgctggacgttgacagacatctctcaagctttgcagccctgcccaaagcca
gcagggaaacagaagaacgaaagcaagaaatcaaaagataaacaacccccatctaaaagt
gatgatggagatcaaaatagtgaataa
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