Misgurnus anguillicaudatus (oriental weatherfish): 129421516
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Entry
129421516 CDS
T09481
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
manu01002
]
129421516 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129421516 (usp42)
Enzymes [BR:
manu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129421516 (usp42)
Peptidases and inhibitors [BR:
manu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129421516 (usp42)
Ubiquitin system [BR:
manu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129421516 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129421516
NCBI-ProteinID:
XP_055033084
LinkDB
All DBs
Position
4:complement(16781333..16797726)
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AA seq
1167 aa
AA seq
DB search
MMTIVDKPPEKPDLESVRFKHSSSLTPFSTRDMESSSSSWSVGPSGTEISRAKTACMAPT
IGVTVNGNNNTAQVERPREQVVTTSGDGIAPPQKVLFSPERLGLKWNQGHRIGSGLQNLG
NTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPI
GVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFVHQIFGGYL
RSRVKCLNCKAVSDTFDPYLDISLEIKTAPTLTKAFEQFVKPEQLEGDNAYKCSKCKKMV
TASKRFTIHRSSNVLTISLKRFANFNGGKITKDVRYTEHLDLRPFMSQSHGEPQVYVLYA
VLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIKAVLNQQAYLLFYIRSPDLKNG
SDFGHVNHTPGQSSPRPSIPLKMNGPQYTSSSFIGPQLPPHMMKNSSYINGHGSSKDYHS
GSKPNRNFGGVTKVGSGPSHSSSSASSSSSSTSQSNQIVRPMGIPDSSKRPKLTFYIGQG
KPVRPTQTQSSANCSASSLSQSTSTNTLKTTSGFPQTKQVNGTHTGAAFLVPYGQESSEE
SDQEAGTLENGTPRPPKITNGNGVKDDVQAHNSSSLPQHTSKTNGSNGFPELHGCENGSG
SAHKSQNGIPKANGFNHTDEVTGTSHTSSQITNPSNNSDLQFDLKPGNGESCSKPPSTDL
HQCSSPPSKREKLSSDSLAHSSTQMQSANPSNASLVSKTDNDVHVEAASKIESNQTHATH
PAVQVNHSLHVGDGHTSPLRLKETLTCTEGEVKESKSPQFGSSEGRRPIEDRNRIVERPH
FSSTLKDRDRYRHHREYDDRNRNRYGHSHRHEREYRPIRERSTSRERHYRDREGDRRWDR
YTHHYREHPHSQRRIREERDRTRDGRYASGYDAYRSSGHHNKDGFSSNSHRGTDGGDRGR
AIHTVSENNSRTRPSSPRSVSPLSGHHKRKRSLSADTRASSECRVKKAKKKKKNKDKHRR
TEKDTSETNEDSSSRRHRRKKKKKKRRRWDEEKHHTEKDANHRRDEHESRSRNGGESRHH
SSESHHNVNRGDHHKEDQQKLNGHKANGLNCYSGSEPDLCHTELEKDSKHKHDTTVNCTK
THSNRNGDVDDVYHRILADVKEVTNSH
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatagttgacaaacctccagagaaacctgacctggagtcagtgcggttcaag
cactccagctccctcacacctttctccacaagagatatggagagcagtagttcgagctgg
agtgttggcccctccggcactgagatttcaagggccaagactgcttgcatggccccgacc
attggagtgactgtgaatggtaataacaacacagctcaagtcgaaaggcctcgggaacaa
gtggtaacgaccagtggagatggcattgctccgcctcagaaggtccttttttccccagag
cggcttggcttgaaatggaaccagggccaccgtatcggatcaggtctgcagaaccttggc
aacacatgttttttaaattcaaccctccagtgtctaacctacacggcaccgcttgcaaac
tacatgctaaccagagagcattccaaaacatgtcatgagcctggattctgcatgatgtgt
accatgcaaaatcacatcattcaggtgttcgccaactctggaaatgtcatcaaacctatc
ggtgtgcttaacgaactgaaacggattggaaagcatttcagatttggaagtcaggaagat
gcccatgaatttttaaggtatacagtggatgctatgcaaaagtcctgcctacctgggacc
aagctggacagacaaacacaggctaccacttttgtacatcagatatttggaggttatctg
agatccagagtcaaatgtttaaattgcaaagcagtctctgacacgtttgacccttatctg
gatatttcactggaaataaagaccgctccgacacttacaaaggcatttgaacagtttgtt
aagcctgagcagcttgaaggagataatgcttacaaatgctccaagtgtaagaaaatggtc
accgcctcaaagagattcaccattcatcgcagttctaatgttcttaccatctcactgaag
cggtttgccaacttcaacggaggaaaaattacaaaggatgtgagatacactgagcatcta
gatttgcgtcccttcatgtctcagtctcatggagagccgcaggtctatgttctgtatgcc
gtgctggttcattctggcttcagttgccacgctggacactactactgctacataaaggct
agcaatgggcagtggtatcaaatgaatgactcatccgtatctcttagcgatattaaagca
gtgctgaaccagcaggcatacttgctgttctatatcaggtcgcctgatttgaagaacgga
agtgattttggtcatgtgaaccatacaccaggtcagtcatctccgcggccatccattcca
cttaagatgaatggacctcagtacacctcctcttctttcattggccctcagttgccacca
catatgatgaagaactcatcatatatcaatggacatggttcttcaaaggactaccatagt
ggttcaaagcccaacagaaactttggtggtgtgaccaaagtaggttctggtccatctcat
tcgtcctcttctgcgtcttcgtcatcctcttccacatctcaatccaaccaaattgttcga
cccatgggaattcctgactcctctaagaggccgaagttgacgttttacattggtcagggc
aagcctgtgagacccacccagacccaatcaagtgctaattgctccgcgtcctcactttct
cagtccacatccactaatactttgaagactacctcaggcttcccacagaccaagcaggtc
aacggaactcacactggagctgctttcctggttccttatggtcaggaatcctctgaagaa
tccgatcaagaggctggaaccttggagaacggaacacctaggcctcccaagataaccaat
ggaaatggagtaaaggatgatgtccaagcccacaattccagctcactgcctcagcatacc
tcaaagacaaatggatccaatggctttccagaattgcatggatgtgaaaatggttcagga
tctgcccataaatctcaaaacggcattcccaaagctaatggttttaatcatactgatgag
gtaaccggtacttcacacacttcctctcaaataactaatccatccaataattcggactta
cagttcgacttgaaacctggaaacggcgagtcatgctccaaaccaccaagtacggacctt
caccaatgttcctcacccccaagcaaaagagaaaaactttcctccgattctttagctcac
tcttctacgcaaatgcagtctgcaaatccatcaaatgcctctttggtctctaagacagac
aatgatgtgcatgtcgaggcagcctcaaagatcgagtcgaatcagacccatgctacccac
ccagcggttcaggtgaaccatagccttcatgtaggtgatggtcacacaagtccacttagg
ttaaaggagacgctcacttgcacagaaggtgaagttaaagagtcaaaatccccgcaattt
ggatctagtgagggaagaagaccaattgaagaccggaacaggattgtagagcgtccacac
ttttcctccaccctgaaagacagggataggtacaggcatcatcgggaatatgacgataga
aacaggaaccgctatggacacagccatcgacatgaacgagagtatcgtcctatcagggag
cgctctaccagcagagaacgccattacagagatcgtgaaggggatcgacgctgggacagg
tacacgcatcactatcgggagcacccacactctcaaagaagaatcagggaggagcgggat
cgaaccagagatgggagatatgcaagcggatatgatgcttatcgttcttctggacatcac
aacaaggatgggttttctagcaactcccatcgtgggacggatggtggtgaccggggacgg
gcgatccatacggtcagcgagaacaactcaagaaccagaccttcatctccacgttctgtc
agcccactgtctggacatcacaagaggaaacgcagcctgtcggcagacacaagggcaagc
tctgagtgccgggttaagaaagccaaaaagaagaagaaaaacaaagacaaacacagacgc
acagagaaagacacatcagagacgaatgaggacagcagctccaggagacataggaggaag
aaaaaaaagaaaaagagaaggaggtgggatgaggagaagcatcatacggaaaaagatgcc
aatcacagacgggacgaacatgagtctagatcgagaaacggtggagaaagtcgccatcac
agctctgaatctcatcacaatgtcaaccgaggagaccatcataaggaggaccagcaaaag
ctcaatggacacaaagcaaatggcttgaactgttacagtggaagtgaacctgacctctgt
cacactgagttggagaaggattcgaaacacaaacatgataccactgtcaactgcacaaag
acacactcgaatagaaatggagatgttgatgatgtctaccatagaatccttgcagatgtt
aaagaagtcacaaattctcactga
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integrated database retrieval system
