KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129422086
Entry
129422086         CDS       T09481                                 
Symbol
prpf19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040  Spliceosome
manu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129422086 (prpf19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129422086 (prpf19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:manu03041]
    129422086 (prpf19)
   04121 Ubiquitin system [BR:manu04121]
    129422086 (prpf19)
   03400 DNA repair and recombination proteins [BR:manu03400]
    129422086 (prpf19)
Enzymes [BR:manu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129422086 (prpf19)
Spliceosome [BR:manu03041]
 Complex B
  Other components
   Prp19 complex
    129422086 (prpf19)
 Complex C
   Prp19-CDC5 complex
    129422086 (prpf19)
Ubiquitin system [BR:manu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   129422086 (prpf19)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    129422086 (prpf19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_Nup120_160 U-box Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_DCAF12 Tricorn_2nd zf-Nse Cytochrom_D1 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 129422086
NCBI-ProteinID: XP_055033760
LinkDB
Position
16:complement(5346412..5354178)
AA seq 505 aa
MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGADPINGQPLSEEQLIDIKVSHP
IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLVAPQAAAASQPAAVGAGGEAMEISEQVGMTPEIIQKLQDK
ATVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASIPGILSLDLCPTDTNKVLT
GGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPSESVVFSASPDSTIRVWSVTGGNCV
QVIRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDVQTGRVLTKVTDETAACALTCAQFH
PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLW
DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWTEVLNFADQSGLVT
GVAFGEHAQFLASTGMDRSLKFYSL
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctctcgtttgcgcaatctcaaatgaggtacctgagcacccctgcgtctctcctgtg
tccaatcaagtgtttgagagacgtttgatcgagaagtacatcgctgagaatggagccgat
cccatcaatggacagccactgtctgaagaacagctcatcgacatcaaagtgtctcacccc
attcgaccaaaggctccatctgccacaagtatccctgctatcctgaaatctctgcaggat
gaatgggacgctgtaatgcttcacagttttactctgagacagcagctgcagaccacacga
caggagttgtctcacgccctataccagcacgatgcggcatgcagagtcatcgcacgtctt
acaaaagaggtcacggcggccagagaggccttggctacgctcaaacctcaggctggactt
gttgctccacaggccgctgccgcctcccaacccgctgctgtgggtgctggcggtgaggcc
atggagatcagtgaacaggttggaatgactccagagatcatacagaagcttcaagacaag
gccaccgtcctgaccacagagagaaagaagagaggaaagactgtgccggaggagctggtc
agagcggaggatctcagcaagtaccgccaagtggcatctcatgctggtcttcacagtgcc
agtatcccaggaatcctctctctggatctctgcccaacagataccaacaaagtcctcacc
ggtggagcggataagaacgtggtggtgtttgatcgtcgagaggaacagattgttgccacc
ctcaaaggacacaccaagaaagtgtcatctgtcatctaccatccctctgagtcggtggtg
ttctcggcatctccagacagcaccatccgcgtgtggtccgttaccgggggcaactgcgtg
caggtgataagggctcacgaggcgggtgttaccggcctctctctccacgctaccggagat
tacctactgagctcatctgaggaccagtactgggccttctctgatgttcagactggacgt
gttttgactaaagtcactgatgagactgctgcgtgtgcactgacctgtgctcagttccac
cctgacggtttgattttcggcactggcacagcagattctcagattaagatctgggatctg
aaggagaggaccaatgtagccaacttccctggccattctggtcctgtgacagccatcgct
ttctcagagaatggatactatctggccaccggtgctcaggacagttcactgaaactctgg
gatttgcggaagctcaagaactttaagacaatcacattggacaacaattatgaggtgaaa
tctctggtctttgatcagagtggaacatatcttgctgttggtggctcagatatcagagtt
tatatctgtaaacaatggactgaggtcctcaactttgctgatcaatctggtttggttact
ggtgtggctttcggtgaacatgcccaattcctggcatccaccggcatggacagaagtctg
aaattctacagtctgtag

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