Misgurnus anguillicaudatus (oriental weatherfish): 129422144
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Entry
129422144 CDS
T09481
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129422144 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129422144 (cstf2)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129422144 (cstf2)
U7-dependent histone pre-mRNA processing factors
129422144 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
129422144
NCBI-ProteinID:
XP_055033849
LinkDB
All DBs
Position
16:complement(23396905..23407481)
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AA seq
506 aa
AA seq
DB search
MASLAAAAAAAAAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDGCIPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAFAL
LQAQVVMRIVDPEIALKMLHRPAVVQPINPNSQPGAVPVTNQPLPQPTAPVSQPQPMPGM
HVNGAPQMMQPPQMGGGVPGPMPGQGPMGPAGGMQAQIGIPPGGPVPMDRGPGNLQDSPV
GAAGQAAIERSPVPIVDPRAPMRGAPPGPPGIPPRGLLGDGPNDPRGGSMVGGEVVEPGR
GYIGGPPQHQGPPMHMAPPDMRGPHDMRGGPMMGDPRGPMMEQRGPPMEARGRDPRAVDA
RGPISGQRVPVAGGMQGPPPHGMGQSAPPPARPGPPADVSSQDHEKAALIMQVLQLTPEQ
IAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttagcagccgcggccgctgcagctgcagctgccagagatcccgctgtggat
cgctctctccgttcagttttcgtgggaaacatcccatatgaggccacagaggagcagttg
aaagacatcttctcagaggttggacttgtcgtcagttttaggttggtgtatgacagggaa
acaggtaaaccaaaaggttatggcttctgtgagtaccaggatcaagagaccgcacttagt
gccatgcgcaacttgaacggcagagaattcagtggaagagccctccgtgttgacaatgca
gccagtgaaaagaataaagaagagctcaaaagtttgggcactggtgctccaattattgag
tccccatatggagatggctgcataccagaagaagccccagagtcgatcagtagagctgtg
gccagcctgccccctgagcagatgtttgagctaatgaaacagatgaagctttgtgtgcaa
aacagtccacaggaagccagaaatatgctgttgcagaatcctcagctagcctttgccttg
ctgcaggctcaggttgtaatgaggattgtggaccctgaaattgcgctgaaaatgcttcat
cgtccagctgtggttcagcccataaacccaaattctcagccgggtgcagtgcctgttact
aaccagccccttcctcagcccactgcccctgtctctcagccccaaccaatgccaggcatg
catgtgaacggagcccctcaaatgatgcagcctccacagatgggcggcggagtacccgga
ccaatgccaggacagggaccaatgggaccagctggtgggatgcaagctcaaataggaatc
ccaccaggaggtcctgtacccatggataggggaccaggaaaccttcaggactctcctgta
ggagcagctgggcaggctgctatcgagcggtctccagtgcctatagtagacccacgtgcc
ccaatgcgaggggctccaccaggccctccaggcatcccaccaagaggcctccttggtgat
ggtccaaatgatccacggggaggttcaatggtcggtggggaagtggtggaaccagggcgt
ggttacattggaggccctccacaacaccagggcccccctatgcacatggcacccccagac
atgcgtggacctcatgatatgagaggaggaccaatgatgggagatcctagaggccctatg
atggaacagcgtggcccaccaatggaggcaagaggtcgtgatccacgggcagttgatgct
cgaggtccgatatcaggtcagagggttcctgtggcgggtggaatgcagggtcctcccccc
cacggcatgggacaaagcgcacctcccccagcaagaccaggtcctcctgctgatgtgtca
tcacaagatcatgagaaggctgccttgatcatgcaggtcctgcagctgaccccagaacag
atcgccatgctgccaccagaacagaggcagagcattctcatactgaaagagcagattcag
aagacagcgggcgcgccgtga
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