Misgurnus anguillicaudatus (oriental weatherfish): 129422285
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Entry
129422285 CDS
T09481
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129422285 (rnf20)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129422285 (rnf20)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
129422285 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
129422285
NCBI-ProteinID:
XP_055034084
LinkDB
All DBs
Position
16:complement(10368395..10389500)
Genome browser
AA seq
1006 aa
AA seq
DB search
MSGQKRSCDPSGSVALGAPPEKKKGGEDGEGMSTGSGGSTAVETVIKLGGGLNLEEQDIK
ALQIKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDENVRLIAR
RYDQTGSEPVESQPPEGRSLEPGTPEPDGDSNPERAKGQGEGPSSFLATLASSTSEEMEA
ELQERAESSCKQASRVIEIYENLKNTVDQLKKDMESGADGCLWDVAVRLNTLLTKENERL
RQLTDDLQQKHSHMTSESRSLGRAANRADNRISELQVLIEELQWDMEKFRRRENRLNTHL
TEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSELQKLQQDL
QTVYQENNNMKVELLSRAEEVARESAEYRCLQSQFSVLYNESLVLKSQLDETKARLNTTR
TARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPIN
REMRHLISTLQTHNQQMKGEVVKYKLRLREAQQELNQLRAAKGNAAVQSQSSTELEVKEE
ITSPVTPAQTSDVSIKTETDSGSATPSTTGVTVKTELGTETETVVKEEEKEKDKDKEKEK
EKEHRERERMNRGSTGGGVVKEERDKASTSSSQSEDLAPERCAVIGVPKRKEVEQLKIVR
VELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEELRQRVRELEEKERR
EGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLM
QQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKER
LLQGTISAAERELALRTQALEMNKRKAQDSVLLSEDVRSQLEGVQQRLGAVREEVVENSI
SREKESFNARRAQEDISKLRRKIENVKKPAENIRNGDEILNEEINDYKARLTCPCCNSRV
KDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcagaaacgttcctgtgaccccagtggctctgttgccctcggtgctcctcca
gagaagaagaagggaggtgaggatggagagggaatgagcactggatccggtggaagcact
gctgtagaaaccgtcattaaactgggaggaggtttaaacttggaggaacaggatatcaaa
gctctgcagattaaaaacagaaagttgggagaggcgctagaccaaagacaggtgattgag
gatgaactgagagagagagtcgagaggttggagacccgtcaggcgacagatgatgcgagt
ttgctgattcttaacagatactggaaccagtttgacgagaatgtgcggttaatagcccgc
cgctatgaccaaacaggaagtgagcctgtagaaagccaaccacctgaagggcggagttta
gaaccaggaacaccagaaccagatggagactcaaatccagagagagccaaaggtcagggt
gagggaccgagctcatttttggccacactggccagcagcaccagtgaggagatggaggcg
gagctgcaggagcgggcggagtccagctgtaagcaggccagccgtgtgattgaaatctac
gagaacctgaagaacacagtagatcagctaaagaaggacatggagtctggtgcagacggc
tgtctctgggatgtggctgtccggcttaacacccttctgaccaaagagaatgaacgtctc
cgtcagctgacagatgatctccagcagaagcacagtcacatgaccagcgagtctcgttca
ttgggccgtgcggcaaaccgtgctgataacagaatcagtgagctgcaggttctgatagag
gagctgcagtgggatatggagaagttcagacgaagggaaaatcgccttaacacgcacctt
acagaggtgctggagagggtaaacagtaaaggttataaggtgtgtggtgaagcaagcagt
gtttgtgggaccatcactatcaacaaaaggaagtttgaggagatgaacagtgagttggag
gagaacagggagctggcggagaatcggctgagtgaacttcagaaactccaacaagatctg
cagacggtttatcaggagaacaacaacatgaaggtggagttgttgtccagggctgaggag
gttgccagagaaagcgcagagtatcgctgtctgcagtctcagttctcggtgctctacaat
gagtctctggtgttgaaatctcagctcgacgagaccaaagcacgactcaatacgaccagg
accgcccgtctgcgccagctggaccacatggagaatgatgaggtgtcgctgcagcgtaag
gtccgtactgaagtgattcagctggaggacaccttagcacaggtgcgcaaggagtacgag
atgctgaggatcgagtttgagcaaacactagctgctaatgaacaagcaggccctataaac
cgtgaaatgcgacatctgatcagtacactgcagactcataaccagcagatgaaaggagag
gtggttaaatataagcttagactgagagaggctcagcaagagctcaaccagctccgtgcc
gccaaaggcaatgctgctgtccaatcgcagtcaagtacagagctggaagtgaaggaggag
atcacctccccagttacaccagcacagacaagtgatgtttctatcaagacagagacagat
agcggctcggctacacccagcaccactggtgtaacagttaagacagaactgggtacagaa
acagagactgtggtaaaagaggaggaaaaggagaaagataaggataaggaaaaagaaaag
gagaaggaacacagagaaagagagaggatgaaccgtggtagtactgggggcggagttgtg
aaagaagagagagataaagccagcaccagcagcagccaatcagaagacttagcgcctgaa
cgctgcgctgtgattggagttcctaaacggaaggaggtggagcagttgaaaatagtcagg
gtggagcttaagaaagcccaagagtcccagagggagatgaagcttttgttggacatgtac
cgctccgctccaaaagagcagcgagacaaagtacaactgatggcagcggagaagaagacc
aagtcagaggcggaggagctccggcagagggttcgagagctggaggagaaggagaggaga
gaaggaaagaagatggcagatgaagaggctctgagaaagattcgttcagtagaagagcag
atcgatattcttaataagaaactttccctcgctaagcaggaggaggatgcgctgctgagc
gagatggatgttaccggtcaggcctttgaggacatgcaagagcagaacattcgtcttatg
caacagctcagagagaaagatgatgccaatttcaaactcatgagtgagcgaatcaaatcc
aaccaaatccacaaacttctcaaagaggagaaagaggagctagccgaccaattgcttaca
ctaaaaacacaggttgatgctcagttgcaagttgtacgaaagctagaggagaaagagcgc
ctgctgcagggcaccatcagcgctgcagaaagagagctggctcttcgcacacaagcatta
gagatgaacaaacgcaaggcacaggattcggtgttgctatccgaggacgtgcgatctcag
ttggaaggagtacagcagaggttgggtgctgtcagagaggaggtggtcgagaacagcatc
tcccgtgagaaagagtccttcaatgctcgacgggcacaggaggatatatctaagctacgc
aggaaaatagagaatgtaaagaaacctgctgagaatattcgcaatggagatgagatcctc
aatgaggaaatcaacgattacaaggcccggttgacgtgtccatgctgcaattcacgcgtg
aaagacgccgttttgacaaagtgctttcacgttttttgcttcgagtgtgtcaagacacga
tatgacacccgtcagaggaaatgcccgaagtgcaatgccgctttcggtgccaatgatttc
catcgcatctacatcggataa
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integrated database retrieval system
