Misgurnus anguillicaudatus (oriental weatherfish): 129422370
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Entry
129422370 CDS
T09481
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129422370 (ssrp1a)
03036 Chromosome and associated proteins [BR:
manu03036
]
129422370 (ssrp1a)
Transcription factors [BR:
manu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
129422370 (ssrp1a)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
129422370 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
129422370
NCBI-ProteinID:
XP_055034233
LinkDB
All DBs
Position
16:complement(10955941..10973704)
Genome browser
AA seq
705 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQSVVYKSSKTGKVDNIPAPEISLANWRRVCLGH
GIKLSTNTGHIYKYDGFKETDFEKISAFFKANYKVELTEKDMCVKGWNWGTAKFSGPQLS
FEVGDNPAFEIPLNNVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFTKDEDLSLTLNMNEDEVEKRFE
GKLNKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVYLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYIFSNIEREEYGKLFDFVN
AKKLNIKNRGIKENMKGTDGYSDSDEDKHDAYLERMKEEGKIREEADGSDESEGDSDESF
NPGEEEDEVAEEFDSNASESESEGEDGDSEDEGKKKKPEKKPKKVVKEKKERKPRKEKKV
KDAGAPKRPMSAYMLWLNGNRERIKSEYPGISVTEISKKAGEMWKQLGKDRKEEWDKKAE
EAKRQYEKAMKEYKESGGGGGASAVTKEKKKKGGKVDAKKSGGEKEKKKEGGNESFKSKE
FISSEESSSESDHDRGSKRKASDDDDDEEEVASTPPSSEAESGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactcttgagtttaacgagatctatcaagaagtgaagggatcttggaatgac
ggccggctgcggtttagtaagcagtctgtggtctataaaagcagtaagacagggaaggtg
gacaatattccagccccagaaatctctttggctaattggcgtcgtgtctgcctgggccat
gggatcaaactgtccaccaacaccgggcacatttacaaatacgacggctttaaagaaaca
gattttgagaagatttctgcgttttttaaagcaaactacaaggttgagttgacagagaag
gatatgtgtgtcaaaggctggaattgggggacggctaaattttcaggtccccagctgtcg
tttgaggtgggtgacaatcccgcctttgagatcccgctgaataacgtatcccagtgtgcg
acaggaaagaatgaagtgacgttggagtttcatcagaacgatgatgctgaggtgtcgcta
atggaggtccgcttctacgtcccacccaacactggagacgatggttcagaccccgtagag
gcgtttgctcagaatattctctcgaaggcagatgttatccaagccactggagatgctgtg
tgtatatttaaagagcttcagtgtcttacaccgagaggaaggtatgacatccgtatctac
cccagcttcctgcacctgcatggtaagacatttgattataagatcccctacacaactgta
ctgcgtctcttcctgctgccacacaaggaccagaggcaaatgttttttgtgatcagtcta
gacccgcccattaaacagggtcagacacgttatcacttcctcatactcctcttcactaaa
gatgaagatctcagcctgactctcaacatgaacgaggatgaggtggagaaacgctttgaa
gggaagctcaataagaacatgtccggtcctctctatgagattgtcagtcgggtcatgaag
gctctggtcaacagaaagatcacagtgcctggaaacttccagggacactcaggatctcag
tgtataacgtgtgcatataaggcgagctcagggctgctgtatccgctggagagaggcttt
atctatgtccacaagcctccggtttacctgcgcttcgaagagatctcctgtgtcaacttc
gctcgagggaccaccaccactcgctcctttgacttcgaaatagagaccaaacaaaataac
cagtacatcttcagcaacattgagagggaagaatacgggaaactttttgactttgtcaat
gccaagaagctgaacatcaagaacagaggaattaaagagaacatgaaaggcacagacggc
tacagcgattcagacgaagacaagcatgacgcgtacctggagagaatgaaagaagagggc
aagatcagagaagaggcggatggaagcgacgaatcagagggagatagcgatgaatctttc
aaccctggagaggaagaagatgaagtcgcagaagagtttgatagtaacgcttcagagagt
gaaagtgagggtgaggatggagacagcgaggatgaaggcaagaagaagaaaccagaaaag
aaacccaagaaagtggtaaaggagaagaaagagagaaagccacggaaagagaagaaagtg
aaggacgcaggtgctcccaagaggccgatgagcgcttacatgctatggctaaatggcaac
agagagcgaatcaagagtgagtatcctggtatctctgtgaccgagatctcgaagaaggct
ggagagatgtggaaacaactgggaaaagatcggaaagaggagtgggataagaaagcagaa
gaggccaaaagacaatatgaaaaagctatgaaagagtataaagagagcggaggtggaggt
ggagcgtctgctgtgactaaagaaaagaaaaagaaaggagggaaggtggacgctaagaag
agcggaggggaaaaggagaaaaagaaggaaggcgggaacgagagctttaagagcaaagag
ttcatctccagtgaagagagctcatctgaatctgaccacgacagaggcagcaagcgcaag
gcttctgatgatgatgatgatgaagaggaagtcgcctccacaccaccaagctctgaggca
gagtcagggtctgactga
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