Misgurnus anguillicaudatus (oriental weatherfish): 129422671
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Entry
129422671 CDS
T09481
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129422671 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129422671 (atrx)
03036 Chromosome and associated proteins [BR:
manu03036
]
129422671 (atrx)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129422671 (atrx)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129422671 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
129422671
NCBI-ProteinID:
XP_073710122
LinkDB
All DBs
Position
16:complement(4277735..4345401)
Genome browser
AA seq
2040 aa
AA seq
DB search
MSTEILRSNKLNTLVSKLHEFLGQSPDDESFESHNTKTSNGEMATSDLNTPEEKMNEPGC
SSDLTKSSSSRSKRKPSFVTKHTAVEESECASESGGEHQAGADGKQSSLDISKLPQGTVV
VKPEPVANETKDEFRGPEFRNRGTSKVKEEGARKRPEEQLQDICNCTACGQQVNHFQRDA
IFQHPALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLICCDYCSNAFCKTCIL
RNVGRKALSEIMSEGSKWHCYVCSPEPLQDLVKTCETVLLNLEHTYKKNKGDGGDKTKRE
ERKLKHSKREKASVNGQDHSSDGAGTLAFTCKTMSVPKELVKKTKKLIETTNGLNRTFVH
FLQSTSTGHEANALSYRHLRAFKSVLADLKKAHAALDESLDKEFETRGLKFQNGEEHRPP
ESQSAAKTVENKHLTEHHGVEEDGLDSTTTDHNPQMEENNQMESDSNDVEMETLPGSPEK
VQDQSGEDEAKDQGGIADAPECENESVQAGETSLDKDIVSVPPSVPDELFEMVESLAVKK
EDENNSESGDSKLTSTTEFMDSTKGLAKLGKKLVVKLTPVPLKITIKRDKSKDASLSKDV
DGNVSPEEAADSRHSPRMKTTPLRKSPEAKSKSKTKSISNDEKCSAVNQRCDSDSDEVPE
VLQTAALKDSSDESDAENGENGAPGKGSRKKRSASRSTEKTVKRKLIQGSADSEASDGTS
KTKKRNAKKKKGNESDSSNHNSDLEKQMKSLSKLGSEKKTSKGGKKEKNESGKEGKKGPK
RSFERLRRSQRGKADTKQDSSSSDDDEGEPASNSGEDSDQQKIKPIIDSVMANIDGFHQS
SGDEGDVKAESSQMVDDDDDPENRIAKRMLLAQIKANYSSGAESSSDEDNLDKDASKKHK
EKNENEEDEEEEETSDSGSDVEVKKRGKRHHLLRKKVTLSEGDSDDETTVKSKKDTKKKS
RRKVGSDDSADSDFERSGSASSDGSALSEAVSTDEDGEKSNKRKTRSSKASSKDKERSYK
KEKKKRRRIKVQDSSSDEKSGDDDDEDAEGDDKGTPKGRKKIRKILKDDHLRTETRDALK
EEEERRRRIAERERLREKLRETIVLEESSQVTCPITTKLVLDEDEETKEPLVQVHRNLVT
KLKPHQVDGVQFMWDCCCESVRKIEKSSGSGCILAHCMGLGKTLQVVTFLHTIMLCEKLN
FSTALVVCPLNTVLNWLNEFSKWQEGLTDEESLEVTELATVKRPQERAYALQRWQEDGGV
MIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAVSKAMNSI
RTRRRVVLTGTPLQNNLIEYHCMVTFIKENLLGSVKEFRNRFINPIQNGQCADSTPTDVR
VMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQCKLYRYYLEHFTNSG
SGLEGARSRTGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEES
SMSLSSEDEKPKRKKRRGRGKQQSSENDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVR
PSSNSRPGSPSPEWYKEFVTEADSEVLEHSGKISLLFEILRMAEAVEDKVLVFSQSLISL
DLIEDFLELAGRAKEEGKPSPYKGEGKWFRNLDYYRLDGSTNAMTRKKWAEDFNDTSNTR
GRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQG
TMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYSFEPDQLDDPSEKKSKRATPM
LPKDPILAELLHSFKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLTMRVN
QPSYSQMGMGSPNYFPFNVAALASMSNQQLEDLLKQGKQKVLEATSALKVVPREPLEDII
AQLWKENPNLPEAQIQSMALGRQANCEMELKHREAVYRDVLGKQQTLMMYVQKVLNNRKV
QEQQIAMARQGMLLNQLAMQNGLTAPMSQMELLGLYQQLGALHGLPSPQLGKNPGPSTGL
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagatcttacggtccaataagctgaacacactggtttctaaacttcatgag
ttcttgggtcagtctccagacgacgaaagctttgaatctcacaatactaaaacctccaat
ggtgaaatggccaccagtgatttaaacaccccagaggagaaaatgaatgagcccggttgt
tcctcagatttgaccaagtcctcatcttcacgctcaaaaagaaaaccttcatttgtgacc
aagcacacagccgtagaggaatctgaatgtgccagtgaaagcggtggtgaacatcaggca
ggagcagacggcaagcagagcagtttggacatcagcaagctaccacaaggaacagttgtg
gtgaagccagagccagttgctaatgaaactaaagatgaattcagaggtccagagtttcgt
aacagaggaacaagtaaagttaaagaagaaggtgcacgaaaacgtcctgaggaacaactt
caggatatctgtaactgcacagcatgtggacagcaagtgaatcattttcagagggacgca
atctttcagcatccagccctgcatgttcttatctgcaagtcatgtttcaagtactacatg
agtgatgatatcagcaaggatgaagatgggatggatgagcaatgcaggtggtgtgcggag
gggggcaacctgatttgctgcgactactgtagcaatgccttctgcaaaacgtgcatttta
cggaatgttggacggaaagcgttgtctgaaattatgagtgaaggaagcaaatggcactgc
tatgtgtgcagcccagaaccactacaggacttggtcaaaacatgcgagacggttttgctt
aatctggaacacacatataaaaagaacaaaggagacggtggtgacaagaccaaacgtgaa
gagcgcaaactcaagcatagcaagcgagaaaaagcgtccgttaacggacaggatcattcg
tccgatggagccggcacattggcctttacttgtaaaacgatgagcgttcctaaggaacta
gtcaaaaagaccaagaaacttatcgagaccacgaatggtttgaatcgtactttcgtacat
ttcctccaaagcacatcgacgggacacgaagcaaacgcgttaagctatagacacttgaga
gcttttaaatcagtattggctgatctaaaaaaggctcacgctgctttggatgagtcgctg
gataaagaatttgaaacaagaggtcttaaatttcaaaacggagaggagcacagaccacct
gagagtcagagtgcagctaaaacagtcgaaaacaagcacttgactgagcatcatggtgtc
gaggaagatggtttggattccaccaccacagatcataatcctcagatggaagaaaataac
caaatggaaagtgattcaaatgatgttgaaatggagactcttcctggctcgccagaaaaa
gttcaggatcagtccggagaagatgaagccaaagatcagggggggattgctgatgctcct
gagtgtgagaatgaatccgtgcaggctggtgaaacctctcttgataaagacattgtgtct
gtaccgccctccgttccagatgaactctttgagatggtcgagagtctcgctgtaaagaaa
gaggatgaaaacaactctgaatctggtgactccaagttgacatccaccactgagttcatg
gactccactaaaggtctcgcaaaactaggtaaaaaacttgtagtcaaactgacccctgtt
cctcttaaaataaccataaaacgagataaaagcaaagacgcgtcactttcaaaagatgtg
gatggtaacgtatcaccagaggaggctgcggacagcagacactcgcccagaatgaagact
acaccgttgcgcaagtcgccagaagcaaagagcaaaagtaaaacaaagtcaatttcaaat
gatgaaaaatgcagtgcggtcaatcagagatgtgattcagactccgatgaagtcccagag
gtcctgcagacagctgctttgaaggacagctcggatgagagcgacgcagaaaacggtgaa
aacggtgctcctggtaaaggaagcaggaagaagaggtctgcttcccgctcgactgaaaaa
actgtgaagcgaaaacttatccagggctcagcagactcggaagcgagcgacgggacatcg
aaaacaaagaaacgaaatgccaaaaaaaagaaggggaatgaatccgactcctccaaccac
aactcggatcttgagaagcagatgaagagtctgagcaagcttgggagtgagaaaaaaaca
tctaaaggtggcaagaaggaaaaaaatgagtctggtaaagagggcaagaagggccctaaa
aggtcatttgagcgcctacgcaggtcacagagagggaaggcggacacgaaacaagattcg
tcctccagtgatgatgatgaaggagaaccggcttcaaactctggagaagacagtgatcag
cagaagattaaaccaataatcgactctgttatggccaacattgatggttttcatcagtca
tcaggtgatgaaggtgatgtaaaggctgaatcctcacagatggtggatgatgatgatgat
ccagagaatagaattgccaagagaatgctgctggctcagatcaaagccaattattcatct
ggagctgaaagttcctcagacgaggacaatctggacaaagatgcatcaaaaaaacataaa
gagaaaaatgaaaatgaagaagatgaggaagaggaggaaacatcagactccggctcagat
gttgaagtgaagaagcgtggaaagcgtcaccatttgttgcgtaagaaggtcactttaagc
gagggtgactctgatgatgagacgactgtcaaatccaagaaggacaccaagaagaaaagt
aggcgtaaagttggcagcgatgattcggcagattctgactttgagcggtcgggctcagcc
tccagtgatgggtcagcactcagtgaggctgtgagtacagatgaggatggagagaagagc
aacaaacgcaaaacacgatcatccaaagcatccagcaaggacaaagagagaagttacaag
aaagaaaagaaaaaacgcagacgaattaaggttcaagactcatcctcagatgagaagagc
ggagacgacgatgatgaagatgcggagggcgatgataaaggaacgcctaaaggtcgcaag
aagatccgcaagatccttaaagatgaccacctgcggactgagaccagagatgcccttaag
gaggaggaggagagaaggagacgtatagctgagagggaacggttaagagagaaacttcga
gagaccattgtgttggaagagtcgtcacaggtcacgtgtcccatcaccacaaagctggtg
ttggatgaagatgaggagaccaaggagccactggtgcaggttcacaggaacttggtgacc
aaactcaaaccccatcaagtggatggtgttcagtttatgtgggactgctgctgtgagtct
gtcaggaagatcgagaagtcttccggctccggctgtattctggctcattgcatggggctc
ggcaaaaccctgcaggtggtgacgtttctccatacgattatgctttgcgagaagctgaac
ttctccacggctctggtggtctgtcctctcaacaccgtgctcaactggctcaatgagttt
tctaagtggcaggaaggcctgacagatgaggagagtttagaggtgactgagctggccaca
gtgaaaagacctcaggagagagcatacgctttacagcgctggcaggaggacggtggtgtc
atgatcattggttatgagatgtaccgcaacctcacgcagggccgaaacatcaagagcaag
aaactgaaagaaacctttcagaaaactttagttgatccaggtccagattttgtgatctgt
gatgaaggtcacattttgaagaacgaagcttctgccgtttctaaagccatgaactccatc
aggactcgacgtcgggtggtgctgacaggaactccgctgcagaacaacctcatcgagtat
cactgcatggtgaccttcatcaaagagaacctgttgggttctgtgaaagagtttagaaac
cgattcattaaccccatccagaacggtcagtgtgccgactccacccccactgacgtccgt
gtgatgaaaaaacgggctcacatcctctatgagatgctggcaggatgtgtacagagaagg
gactatacagcccttacaaaatttctgccaccaaaacatgagtatgtgttggcggtacgg
ttaacaccgattcagtgcaagctgtatcgatactacctggagcactttacaaatagcggt
tccggattggagggtgcacgaagccgtacagggaccaaactcttccaggatttccagatg
ctcagcagaatctggactcatccgtggtgtcttcagttggactatatcagtaaagaaaac
aagggatactttgatgaggacagtatggaggagttcatcgcctcagagacggaggagtca
tccatgagtttgtcctctgaagacgagaagcccaaaaggaagaagagacgtggcagaggg
aaacagcagagctcggagaacgacagcgatgacctggaggtgattaaagagtggaacacc
agctcacgaggaggaaaccctgagggcaggaacagagccgaacctgtcgaggaggttcgg
ccctcatcaaactcccgccccggcagcccgtcaccggagtggtacaaagagtttgtgacc
gaggccgactctgaagtgctggagcattctgggaaaatttcgcttctgtttgaaatcctg
cgcatggctgaggctgtggaagacaaagtgttggtgttcagtcagtctctcatctctctg
gacctgattgaagattttctagagttggcaggcagagccaaagaggaaggcaaaccttca
ccgtacaaaggtgaaggcaagtggttcagaaacctcgactactaccgactggacggttcc
actaatgccatgaccagaaagaaatgggcagaagactttaacgacaccagtaatactcgg
ggtcgattgttcctcatctcaaccagagctggctctcttgggatcaacttggtggctgca
aacagggtcataattttcgatgcctcatggaacccatcttacgacattcagagtattttc
agggtctatcgcttcggtcaagttaagacggtgtttgtctacagatttttggctcaggga
accatggaggagaagatctatgaccgacaggtggccaaacagtcgctgtctttccgagtc
gtagaccagcaacagatcgaacgtcactttacgatgaacgagctgactgagctgtactcg
tttgagcccgaccagctggacgatccttctgagaagaagagcaagagagccacgcccatg
ctgcccaaggatcctatcctggccgaattgctccacagcttcaaagatcacatcgttggc
taccacgagcacgactccttgctggaccacaaggaggaagaggcattgagtgaggaagac
cgtaaagcggcttgggctgagtatgaggcagagaagaagggtctgaccatgcgtgtcaac
cagccgtcttactctcagatgggcatgggatcgccgaactacttccccttcaatgtggct
gctttggcctccatgtccaaccaacagctggaggatttacttaagcagggcaaacagaag
gtcttggaagccaccagtgctctaaaggtggtacccagggagccgttggaggacatcatc
gcacagctgtggaaggagaatccgaatctaccggaggctcagattcagtccatggctttg
gggcgacaggccaactgtgaaatggagcttaaacaccgggaggcagtttaccgtgatgtc
cttggcaaacaacaaaccctgatgatgtacgtgcagaaagtgcttaacaaccgtaaggtc
caggaacagcagatagccatggcgagacagggtatgctgctcaaccaactggccatgcag
aacggcctgacggcacccatgagtcagatggagcttctcggtctgtatcagcagctcggg
gcgctccacggactcccgagccctcagctgggcaagaatccgggcccatctacgggtctg
taa
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