KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129422682
Entry
129422682         CDS       T09481                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129422682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:manu03041]
    129422682
Spliceosome [BR:manu03041]
 Complex B
  Other components
   Prp19-related factors
    129422682
 Complex C
    129422682
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded zf-CCCH_2 Nup35_RRM_2 RRM_3 zf-CCCH zf-CCCH_4 zf-CCCH_3 RRM_YTH1 zf-CCCH_10 RRM_7 RRM_PARP14_3 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 129422682
NCBI-ProteinID: XP_055034702
LinkDB
Position
16:30031670..30038977
AA seq 421 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTSLSIKDDMPRSDVNKEYYTQN
MEREIQNSDDTRPVGMLGKAQKPSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLNRASAMPHLDVPEDKSITTLYIGGLG
EDITDSELRSYFYQFGEIRTITLVQKQQCAFIQFATRQGAEQAAEKSFNKLIINGRRLAV
KWGRSQGAKGKDISDGFSEMGTRLDPVPGLPAPLPPPTALENEAPANYFNLDPSSSSVMN
LSLPPPPGLPNPPPPGFGHPMFHPMGLPPPPPMSLRPPGLIHYPSQDPHRMGAHSAIRHS
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgacgtccctgggatcaaacacatacaacagacagaactgggaagattcggacttc
cctattctctgtcaaacatgtttaggtgaaaatccatatattcgtatgaccaaggaaaaa
tatggcaaagaatgtaagatctgtgctcgtccgttcactgttttccgctggtgtcctggt
gtgcgaatgcgctttaagaaaactgaagtctgtcagacctgcagtaagatgaaaaatgtc
tgtcagacctgtctgctggacctagagtacggtcttcctattcaggtcagagacacaagt
ctgtccattaaagacgacatgccaagatccgatgtgaacaaggaatattacacacagaat
atggagagagagatccagaactctgatgacacgaggcctgtggggatgctgggtaaagct
cagaaacctagcgacatgctgctcaaactggcccgaacgtcaccgtactacaaacgcaac
agacctcacatctgctcattctgggtaaagggagaatgcaagagaggagaggagtgtcca
tacaggcacgagaagcccacagatcccgatgaccctctcgccgatcaaaacattaaagat
cgctattacggcatcaatgacccggtggcgaataaactgctgaatagagcgtctgccatg
ccacacctggacgtgcccgaggacaagtccatcactacattatacataggaggattggga
gaagacattactgattctgagctcaggagttacttctatcagttcggggaaattcgtacg
atcacactggttcagaagcagcagtgtgcgttcattcagttcgccacacgtcagggagcg
gagcaagccgctgagaaatccttcaacaagctcattattaacggacgtagactggcggtg
aagtggggtcgttctcaaggcgctaaaggcaaagacatcagtgacggcttcagtgagatg
ggcaccagactggatccagtacctggtctgccagcacctctaccgccacctacagctctg
gagaatgaagccccagccaattactttaatctggaccctagcagttcttcagtaatgaac
ctcagtcttccccctccacctggactcccaaacccaccaccaccaggttttggacatccc
atgttccaccccatgggtcttcctccacctccaccgatgagtttaagacctcctggcctc
attcactacccctcccaggatcctcaccgcatgggtgcgcactctgccattcgccactct
gattga

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