Misgurnus anguillicaudatus (oriental weatherfish): 129423629
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Entry
129423629 CDS
T09481
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129423629 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129423629 (nfrkb)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
129423629 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
129423629
NCBI-ProteinID:
XP_055035937
LinkDB
All DBs
Position
19:19477690..19496893
Genome browser
AA seq
1295 aa
AA seq
DB search
MDPLDHMLSDPLESGMDRDGRVMEECMLGNCRVRVPEDLLEDPEIFFSVVSESTWTDVLT
DAQRTHLRQFLPQFSENNISEQENTISDLFNNQNLFFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKSQKKRHIYSLQQYYHKLLKQILVSRKELLDFAVRSGPELAVKRRYPAPSHKEVL
EQRVRRRVGHILKDVKTDCGDSNVSSDEDDAASWLPVPQSPSSPTPAISLRVLPSLSTPD
MKARDKPELGEKDLRAMLQRHREKRKRQPDHPDLITSDLHLGDIMSRVNIGRKGSITTNF
ELVLPKKKIKEERRKKKMRPIKTESEEVSDVQMSAASVTPCLADSPAVPLQSVKEEPIDE
SQNSPETVEEIAMSFFHLLEDVLRLEGVATSSMVEEKVQQWQTSPASTLNSWFSMAPCWS
ELVVPALQFLAGESKSGVMAMPTGFVPIVEFKESTQQWKWMGPSQDGDKDLSALFQLWLE
SKDHMVVKQECEDTSDLTPPTPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTYRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFE
KIHQAQAAAAKAKKALQQKPKPAPKPKAGGKEQGAKNGTSEAGQSSGAEAVSINPTNLPQ
PPSTPTPSTPGTPKSPLASTAATPTKTGAPEPVKPSPSVLLVSPPSMPQLGALLPASQTS
QQVSQQASAQPATRVVAHSAATGSLPQVRVVTSSAGQPATLVHQSPHHIRVPVSVTHGKS
ITQTVVTVPLRSQSTGSPIQVQASRGQASVTVPGLASAVTVTKPQTSSPASPAHNPASPA
VLQGVSSQNIIKQVAIAGQLGVKAQSAAGIPLTATNLRIQGKDVLRLPPSSITTDAKGQT
VLRITPDMMATLTKSPMATVKLTPDMLSGATSAGTKSISATLHMSSSQPSPTAPNVAPPA
TAETLAAKAPAALGTTGTATLVKVHPDLKAACDTAIRLMPALSVTMADPKTRTYSTVTSS
DSKAGTTIRIVPNLGVIPQKQGQTVSLSTTTSATKPITVSSGAATVTIATSGVGGAKSVT
LSPAVTGSSLSLGTAAATVRQVPVSATVVSTQAGKIPTRITVPLSVLSQPLKNKSMVTTP
LLKGNISTNIGNLGRNIILTTMPAGTKIIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTV
PAQQLQRTVASSPKSTVSTVVVSTAPSPKTNPDPQ
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttggatcacatgttatcagacccactggagtctggtatggaccgtgatgga
cgtgtgatggaggagtgcatgttgggaaactgccgagttcgggttcctgaagatcttctg
gaggatccagagattttcttttcagtggtgagtgagagcacgtggacagatgttctgaca
gatgctcaacggacacatctccgtcagttcctaccccagttcagtgaaaacaacatctcc
gagcaggagaacaccatcagtgaccttttcaacaaccagaatttatttttcggaaatccc
ttgcacattgctcagaaactcttcagagatggttacttcaatccagaagtggtgaagtac
aggcaactctgtgccaagtcccagaaaaaaagacacatctactctcttcagcagtactac
cacaaattactcaagcagatcctggtctccagaaaggagttgctggattttgccgttcgc
agtggacctgagctggctgtgaaacggcgttaccctgctccgtcccacaaggaggtgcta
gaacagagggtaaggcgtcgtgtgggtcacatactaaaagatgtgaaaaccgactgtgga
gacagcaatgtgtcatcggatgaagatgacgcagcctcttggttgccggttcctcagtcg
ccctcctccccaacaccagccatctccctcagggtcctgcccagcctctctactccggac
atgaaagctagagataagccagagctgggtgagaaggacctcagagccatgctgcaaagg
cacagagagaagagaaaacgacaacctgatcaccctgacctcataacctccgacctccat
cttggtgacatcatgtcacgagtgaatatcggcagaaaaggatcgattacgaccaacttt
gaactagtcctgcctaagaaaaagataaaagaggagaggagaaagaagaagatgcggccc
attaaaaccgaatcggaggaggtgtccgatgtacaaatgtctgcagcttccgtcaccccg
tgcctcgctgactcccccgctgttcccttacaaagtgttaaagaagagcccatagatgag
tctcagaacagccctgaaacggtggaggagatagccatgagcttttttcatttgctcgag
gatgtgctcaggctggaaggggtagcaacgtcctcaatggtggaggagaaagtccaacaa
tggcaaacatctccggcaagcacactcaactcttggttttcgatggccccctgctggtca
gagttggtagtgcccgcactacagtttcttgctggagaaagcaaatctggtgtgatggct
atgcctactggcttcgtacctattgtggaatttaaagaatctacacagcaatggaaatgg
atgggcccaagtcaagatggagacaaagatctgagtgcactgttccagctatggctggag
tcgaaagatcacatggttgtcaagcaggaatgtgaggacacatcagacctcactcctcca
acaccaagagtgtggacagactatgtggtgagacctagtacaggagaagaaaggcatgtt
tttcaagagcaggagcagcagcgctatgatcagccacacaaagccttcacttaccgaatg
cacggctttgagtctgtggtgggaccagtcaagggagtttttgacaaggagacttctctt
aataaagctcgagagcattctttactgcgctctgaccgacccgcctatgtcaccatactg
tctcttgtgagagatgctgctgctaggcttcctaatggagaaggaaccagagctgagatt
tgtgagttactcaaagactcccagtttctggcccctgatgtcaccagtgcacaggtcaac
acagtggtgagcggtgcactcgaccgcctccactacgagaaagatccttgcgtgaaatac
gacatcggccgcaagctttggatctacctccatcgtgaccggagccaggaagagtttgaa
aaaatacaccaggctcaagctgcagctgccaaagccaagaaggctctccagcagaagccc
aaacctgcacccaaacctaaggcaggtggcaaggagcaaggcgccaagaacggcaccagc
gaggctggtcagagctcaggggccgaagcggtcagcattaatcccaccaacttgccccag
cctccctccacccccaccccaagcacccctggaacccccaaatcacctctcgcttccaca
gcagctactccaaccaaaacaggagctccagagcctgttaaacccagtcctagtgtcctg
ttggtgtctcctccgtctatgccgcagctaggagcgctgcttcccgccagtcagacaagt
caacaggtttcccagcaggcctcggcacagcctgcgactcgagtagtggcgcactcggct
gccaccggctctttgcctcaggtgcgagtggtcacctcgtctgcaggccagcctgcaaca
ttagtgcaccagagccctcaccacatcagagtaccagtatctgtgacccatggcaagagc
atcacgcagacagtggtgactgtcccactaagatctcagtctacgggaagtcccatccag
gtgcaggcttcacgtggtcaggccagtgttactgtcccaggtctcgcctctgctgtcacg
gtaaccaaacctcaaaccagttcacccgcaagccctgcgcacaacccagcatcacctgca
gtactgcagggagtaagcagccagaatattatcaaacaggttgctatcgcgggccagtta
ggtgtaaaggctcaaagcgccgcaggaatccctctcaccgccactaacttgcgcattcag
ggcaaggatgtgctccgtctgcccccatcttcgattaccactgatgccaaaggtcagaca
gtgctgcgcatcactccagacatgatggccaccctcactaaatctccaatggccactgtc
aagctcaccccagacatgctgagcggtgccaccagcgcagggactaagagcatctctgcc
actctgcatatgtcttcatcccaaccctctcccaccgctccaaacgttgccccacctgca
acagctgagacccttgctgccaaagcacctgcggctctaggcaccacgggcaccgctacc
cttgtgaaggttcacccggatctaaaggcagcttgtgacacagctatccgcctcatgcct
gccctgtcagtcactatggctgaccctaaaacccgcacttactctactgtaacctcttct
gactcaaaagcaggcaccactattcgaatagtgccaaatctgggtgtgatccctcagaaa
cagggtcagactgtctcgcttagtacaaccacctcagctacaaagccaatcacggtgtca
tcaggggcagccactgtcaccattgccactagtggagtgggaggagccaaaagcgtgaca
ctcagccctgcagtcacggggtcttctctgtctctgggtactgctgcagccacggtcaga
caagtgccagtcagtgccactgtagtttctacacaagcgggcaagattcctacaaggatt
acagtgcctctctctgtcctcagccaacctttgaaaaacaagagtatggtcactacaccc
ttactaaaagggaatataagcacaaatattggtaatctgggcagaaacatcattctgacc
actatgccagcaggcaccaagataattgctgggaacaagcctgtcagttttgtgactgct
cagcaattgcaacagctgcagcagcaaggacaggccacacaggttcgaattcagacggtg
ccagctcagcagctgcagcgtactgtggccagctcaccaaaatccaccgtgtctacggtg
gtggtctccaccgcgccttcgccgaagacaaacccggatcctcagtga
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