Misgurnus anguillicaudatus (oriental weatherfish): 129423648
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Entry
129423648 CDS
T09481
Symbol
whrna
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
manu03037
]
129423648 (whrna)
Cilium and associated proteins [BR:
manu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129423648 (whrna)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
T15H9-4_C
HHD_RTEL1
PAH_ZNF598
C2H2_ASCIZ
Motif
Other DBs
NCBI-GeneID:
129423648
NCBI-ProteinID:
XP_055035969
LinkDB
All DBs
Position
9:26528064..26661733
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AA seq
919 aa
AA seq
DB search
MSTDLERLSLNSSSGNSVASSARTLSANVKKLHNALNLLLSEFEREQFIHCLNVYHSKRN
VYDLVQTLKVILNVPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKSDALARNGDPEGA
HDGANSSPTQGAHFPAHSVALRASPDNISTSSDGTANLIPLLGKNFLPEPPGEIRQVTLK
RHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDRVTHAEA
VKVLKGSKKLSMSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLLVEHRSATLRRTNS
QGRSHMQLLQDGDEKKVNLVLDDGRSLGLMIRGGAEYSLGIYITGVDRGSAAECGGLKVG
DQILEVNGRSFLGIPHDEAVRVLKSSHHLMMTVKDVGRLPHARTVVGETKWIASSQITES
SASSSVTGLSLDQGASASGKAGFYKGMAGSQVTLSSLVNQSRAMLEEQSRHLLTETERQT
MGYYIQEYRDGHVGVEQLVMALFELLNTHAKFSLLSEVRGLVTPQDVERFDSLVLKREIE
ALKARHGGAGFQDSFSMVSYPDTLASSSASYMTNTTLSSARNESMTENNGEQSLEQSNAL
PDVSLDEVQSTSESPPSFKPPPPPGAQRRPGRKATLSKRPSSTSTQSGLYFTAPSRTQTK
EPKHSKPHPKTEVPVSQLSVVSQHPIGPFPRVQSPSKVKPPIQTRSMAPAPAPSVPAPPG
PPPPCPDKPAPSSPAPNQHFVMVEVHRPNAEPDVNEVRPLPQARGGTLSQLSDSGQTLSE
DSGVDIAESGCVSKDSSPRPTRPRTQQDGHGKETAAKPPGLLEPTSALVRVAKTASTLGI
AIEGGANTRQPLPRIVTIQRGGSAHNSGQLKVGQVILEVNGVSLRGKEHREAARLIAEAF
KTKEKDYIDFLITELNVAL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacctagagcgcctgtcgctgaactcttcctcgggtaactctgtggcgtcc
agtgcgcgcaccttatcagccaacgtaaagaagcttcacaacgcgctcaacctgctgctc
agcgagttcgagagagagcagttcatccactgcctcaacgtataccactccaagcgcaat
gtctacgatttggtccaaaccctcaaagtcatactcaacgtcccgagcaagcgtcagctt
ttgcccatgctgcggttggtcatcccgcgctcggatcagcttctcttcgatcaatacact
tcagagggtctctacttaaaatccgacgcccttgcgcgaaatggtgacccggaaggtgcc
cacgatggcgctaattcgagtccaacgcaaggggctcatttcccggcccattcagtggct
ttgcgcgcctcccctgacaacatcagcaccagcagcgacgggacagcgaatcttattcct
ctattgggcaagaatttcttaccggagccccctggtgagatccgacaggtgacccttaag
cgccacaagagcaacgagggtttgggatttagcattcgcggaggctccgagcacggggtc
gggatctatgtgtcactggtggaaccgggttccttggcggaaaaagagggtttgaggata
ggagatcagattatgaaagtgaacgacaaagtgtttgatcgggtcacgcacgcagaggcg
gttaaggtgctgaagggaagcaaaaagctctccatgtcagtgcggtccgtggggcggatc
ccaggcggctatgtcacaaatcacgtttatacttgggtcgatccacagggtcgcagcgtg
tcacctccccctgacttgctggtggagcatcgcagcgccacactgcgccggaccaacagt
cagggccggagtcacatgcaactgctgcaggacggcgatgagaagaaggtgaatttggtg
ttggatgatggacgttctttgggtctcatgattcgtggtggggctgaatactctctgggc
atttacatcacaggagtggaccgagggtctgcagcagagtgtggtggattgaaggtgggg
gatcagatcctggaggtcaacggacgaagtttcttgggcatcccgcatgacgaggccgtg
cgagtgctgaagtcttctcaccacctaatgatgacggtaaaggatgtcgggcgactgccg
cacgcccgcaccgtagtgggcgagaccaagtggattgcaagctcacagatcacagaaagt
tcagctagcagcagtgttacaggactctctctggaccagggagcatcagcatcaggaaag
gctggtttttataaaggtatggcaggttcccaagtcactctgtctagtctggtgaaccaa
agcagggcgatgctggaggaacaatccagacatctactgactgaaacggagaggcaaacg
atgggttattacatccaggagtatcgagacggtcatgtcggcgtggagcagctcgtaatg
gcgctttttgagttactcaatacacatgccaagttttctctgctgtctgaagtcagggga
cttgtgacccctcaagatgtggagaggtttgacagtctggttctgaaacgagagattgaa
gctctgaaggccagacacggaggtgctggatttcaggactccttctctatggtgtcatac
cccgacactctggcttcatcctcggccagctatatgaccaacacgaccctcagctccgca
aggaacgaaagtatgacagagaacaacggggaacaatctctcgagcagagcaacgccctg
cctgacgtctctctggatgaggtacaatccacctcagagtcccctccctcttttaaacca
cctcctcccccaggggctcaacgccgcccgggtcgaaaagccacacttagtaaacgacca
tcttccacctcaacccaatccggcttatatttcaccgccccttctcgcacacagaccaaa
gaacccaaacactccaaacctcaccccaaaactgaggtcccggtatctcagttgtcagtc
gtaagccagcaccctatcgggcctttcccacgtgtccagtctcccagcaaagtaaagcca
cctatccaaacccgatctatggcaccggcacccgctccaagtgttcctgcaccccctggg
cctccacccccatgccctgataaacccgccccttcctctccagcacccaatcagcacttt
gtcatggttgaagtgcacaggcctaatgcagaaccagatgtgaatgaagtgcgaccgttg
ccacaggctcgaggagggacattgtctcagctctcggacagcggacagaccctcagtgag
gacagcggtgtggacatcgcagaatccggatgtgttagtaaggacagcagcccgcgtcca
actcggcccagaacccaacaggatgggcacggaaaagagacggctgccaaaccgcctggc
ctgctggaaccgacctctgctctggtgcgagtggcaaaaaccgccagtacgctgggcatc
gcaatagaagggggagcgaacacacgtcagcctctcccacgtatcgttaccatacagaga
ggtggttcagcccataactctggacaactgaaggtgggtcaagtaatcctggaggtaaat
ggagtttcactccgaggaaaagaacatcgggaagcagctagactcatcgcggaggccttt
aaaaccaaagagaaggactacattgacttcttgatcacagagttaaatgtggctctatag
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