Misgurnus anguillicaudatus (oriental weatherfish): 129424525
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Entry
129424525 CDS
T09481
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129424525
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129424525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
Prok-RING_4
zf-RING_5
zf-Nse
Sina_RING
AAA_11
Exonuc_VII_L
Apolipoprotein
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
129424525
NCBI-ProteinID:
XP_055037206
LinkDB
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Position
19:37084432..37087212
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AA seq
494 aa
AA seq
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MASKSFSEEDFSCPLCCDIFTNPVVLSCSHSICKDCIQRFWESKGFQECPVCRKRSLRDE
PPINLALKKLCETFLKERSQRSSSVCHLHDEKLKLFCLDDQQPVCLVCRDSRTHNNHKFC
PVDEAVIDNKEKLKTELKSLQEKLTIFEESKKTLDKTAEHIKIQAERTEKQIHEEFEKLH
QLLHDEESVRITALREEEEQKSQMMKEKIEKMSSEISSLSHTIRVIEKQMTAEDVSFLQD
FKSTMEIVFAVSLSDCESKLTAESETPECSSKVQGKTSDPEDISEKMLIDVAKHLSNLKF
TVIQKMKEKVEYIPVTLDPNTADCCLFLSDDLTSVRFSEDAALLPDNPERFDECACVLGS
ESFNSGIHCWDVQVGDNTYWHLGVMSESAERKKNIYSRSRIWCVRYYSGEYFAVITSQTF
LDLPVKTVLHLPVKVKLERIRVELDYDRGNLSFSDPLTNTHIHTFTHTFTERVYPWFSVG
CDISPLVILPVKSS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaatctttttctgaggaggatttctcttgtcctctgtgctgtgatattttt
acaaatcctgttgtgttgtcttgtagtcacagtatctgtaaagactgtattcagagattc
tgggaaagtaaaggatttcaagaatgtccagtttgcagaaaacgatctttaagggatgaa
cctccaataaatttagctttgaagaaactgtgtgagactttcttaaaggagagaagtcag
agatcttcatcagtttgtcatcttcatgatgagaaactcaaactcttctgtctggatgat
caacagccggtgtgtttggtgtgtcgagactccagaactcacaacaaccacaaattctgt
cctgtcgatgaagctgtcattgataataaggagaaactcaaaactgaattaaaatcctta
caggagaaactgacaatatttgaggagtctaagaaaactttggataaaacagcagaacat
ataaagattcaggctgaacgcacagagaagcagattcatgaagagtttgagaaacttcac
caacttctacatgatgaagaatcagtcagaataacagcactgagagaggaagaggagcag
aagagtcagatgatgaaggagaagattgagaagatgagcagtgagatttcatctctttca
cacacaatcagagtcatagagaagcagatgacagctgaagatgtttcattcctacaggac
tttaagagcacaatggagattgtgtttgctgtttctctcagtgattgtgaatctaaactc
acagcagaatctgagactcctgaatgttcttccaaagttcagggtaaaacgtcagatcca
gaggacatctcagaaaagatgttgatcgatgtagcaaaacatctcagcaacctaaagttt
actgtcatacagaagatgaaggagaaagttgaatacattccagtgactttggacccaaac
actgctgactgttgtctctttctgtctgatgatctgaccagtgtgagattcagtgaagat
gcagcactgcttccggataatccagagagatttgatgagtgtgcatgtgttttgggttca
gagagctttaattcagggattcactgctgggatgttcaggttggagacaacacatactgg
catctgggtgtgatgtcagaatctgcagagaggaagaagaacatatactccaggagtaga
atctggtgtgtgaggtattactctggtgaatactttgcagtcattacatcacaaacattt
cttgatctcccagtgaaaacggttctccatctcccagtgaaagtgaaactcgagagaatc
agagttgagttggattatgacagaggaaacctgtcattctctgatcctctcactaacaca
cacatacacactttcacacacacatttactgaaagagtttatccatggttcagtgttggc
tgtgatatttctcctctggtgatcttaccggtaaaatcctcttaa
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