Misgurnus anguillicaudatus (oriental weatherfish): 129425671
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Entry
129425671 CDS
T09481
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129425671 (rnf6)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129425671 (rnf6)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129425671 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129425671
NCBI-ProteinID:
XP_055037748
LinkDB
All DBs
Position
25:complement(20664966..20670954)
Genome browser
AA seq
685 aa
AA seq
DB search
MDPPGGRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPHPEPRPQNSEAEGSSGAVESGPETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTADPTELPMPPPPPSSSAPVPTT
PYNPSRSAPYSLQQPTPYSTTRPTLGRRPAVRRTRSSTAPPVTPPLTSQAPPTALRTNLP
SLPSSAPPQAPLLQPSQEQDSGAVRSQIQVTTSSVNAREGQNGNEDPDCPNAQPGPQVAP
AGREPRNSRTRSRGRVRRAAGAGGALSRSSRRSRSPLDRNPTSTISPTHSNNTTPVESGE
STAVAMEMGEAVVEPTAPADPLPEAGEEEGETPVSGGGGVRRHPTIMLDLQVRRIRPGEN
RDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETG
LGEPSSTALRSILRQIMTGFGELSSLMETEADSETPTPTQDPASVAGAQALRVNGTEGGA
THGGVESAPQGLAEAEEEGQVRVNRTGPEGRPSSRDTNNLVENGTLPILRLAHFFLLNED
EDEEHPRGLTKEQIDNLVTRTYGQVNLEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIH
CIDRWLSENNTCPICRQPILSSHQE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcgggcgagacgagcgtcatcgtcaggcggagcggcttcgacgggag
gaggcatactaccacttcattaatgaacttagtgaggaggagtatagactaatgagagac
agcaacctactgggaacacctggtgaagtcacagcagaggagctgaggcagcggttggat
ggtgcaaaggagcgtgtgtcatctcagccacaccctgaaccacgcccacaaaacagtgag
gcagagggcagcagcggtgctgttgagtcaggtccggagacatccaatggggattccctg
ctggagtggttgaacacatttcgtcgcacaggaaatgccacccgaagcggccagagcgga
aaccaaacttggcgtgctgtcagccgtacaaaccccaacagtggcgagtttcgcttcagc
ctcgagattaacatcaaccacgagcagcctgaacccggagaacacagcgatacggccgat
cccactgaactcccgatgcctcctcccccaccatcatcatctgcccctgtacctacgacc
ccatacaacccatcaaggtctgcaccgtattcacttcaacaaccgacgccatattccaca
accagacccacgttgggaagaaggcctgcagtgaggcgcacccgtagtagcacggctccc
cccgtaacgccccctttgacctcacaagctcctcccacagctctgagaacgaaccttcct
tctttgccaagctctgcccctccgcaggcaccacttttacaaccgtcacaagagcaggat
agtggtgcagtaaggagtcaaatacaggtcacgacctcctctgttaatgcaagggagggg
cagaatggaaatgaagacccagactgccccaacgctcagcctggtccccaggtagcgcca
gccggccgggagccacgaaacagtaggactcgttcacgtggccgtgtgcgcagagcagcc
ggggcaggaggagctttatctcgctcctcaagacgcagccgatcccccctagacagaaat
cccacttctactattagccccacccatagtaacaacactaccccagtggagtctggtgaa
agtacggcggttgctatggaaatgggcgaggctgttgtagagccaactgctccagcagat
cctcttcccgaagcaggtgaggaagagggggaaacacctgtatcaggtggcggaggggtg
cggcggcacccaacgatcatgctggacctccaggtgcgccgtatcaggccaggggagaac
cgtgacagggacagcatcgccagtcgcactcgttcccgggcgagggccgccgagaacacg
gtgacctttgagagcgacagcggtggctttcgccgaaccatctcccgctccgagcgtgca
ggaattcgcacctacgtcagcactatccgcatcccgttgcgacgcatttcggaaacaggc
ctgggtgagcccagctcgacagcactgcggtccatcttgcgccagatcatgaccggcttc
ggtgagctcagctccctcatggagacggaagctgattcagagactcctacgcccacccag
gaccctgcctcagtcgctggagcccaagcgcttcgtgtcaatggcactgagggaggtgca
acccacggtggagtggaatcggcaccacaaggtttagctgaggctgaagaggaaggccag
gtacgagtgaacaggactgggccagagggacggcctagcagcagagacactaacaacctg
gtagagaatggcacattgcccatcctgaggctggcgcactttttccttctcaacgaagat
gaagacgaggaacacccgcggggcctaaccaaagaacagatcgacaatctggtcacacgc
acttacggtcaggtcaacctggagggcgagcagggccgcgcttgcagcgtctgcatcaat
gagtacgctcagggcaacaagctgcgccgcttgccctgcgcccacgagttccacatccac
tgcattgaccgctggctatccgaaaacaacacctgccccatatgcaggcagcctattctg
tccagccaccaagaatga
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