Misgurnus anguillicaudatus (oriental weatherfish): 129425708
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Entry
129425708 CDS
T09481
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X2
KO
K19672
intraflagellar transport protein 140
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
manu03037
]
129425708 (ift140)
Cilium and associated proteins [BR:
manu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
129425708 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
TPR_GEMI5
TPR_IFT80_172
Beta-prop_CAF1B_HIR1
TPR_COPA_B
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
tRNA_int_end_N2
TPR_19
TPR_12
Motif
Other DBs
NCBI-GeneID:
129425708
NCBI-ProteinID:
XP_055037811
LinkDB
All DBs
Position
25:30574644..30620858
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AA seq
1445 aa
AA seq
DB search
MMAVYFDHRIDAPDSRGDAVLISWHSSVCVLAVGSVNTSTGGSVDLYLQQGEHVELCHVE
RGFSPSLLQWHPTKPLLAVGWETGETLLLSHPSGENTTLPANTHNSCITVLEWSSNGSRL
VTGDQAGVMAVWRVDARGKLQGSPLIKHDYGKPLTCCIFRSAAPAEDVAMLARAAVSGDE
TALDMFNWKKSTKGAGFALGSQEGLSFYISTIDGNVFSVDEQARSVALLSVDSAVQKMWF
SKRRSVLAVVTDSLLLSQFSVGPEGFVHEISKVKLSGRGGQHTDIVWTEDGLLLTASGEQ
HIRLWDVELDDHYALSLEESLGFEKGEMLNCVSFCTFKRVLAAGTSRGRVALWHMVTVND
QKGDTKTQWKLQTPVEVEGHITQLQWGSSSHLLAVCGSSCVLILSEHVMCSHYSQQMAAV
QLSPTQLSLSNFNTNTHITFHTDTHIKAVQVTKDMVTVWNGKYITVYEPSEQTLHSTGSF
QCESPALAVHEENIYTVEPNRVQIRTPQGTVKQLLVFSEAEGNPTLLCVCGSYLAVGTDA
SHVRVFDLTRREAKPVGVTKNLAELIPDLGALRSVKCNASGNQLSVLITQVNGRPDNKVY
FYDIELDTLTYFDFFTGRPASSLTQLEDRMQCEVELSARCPVSQFWDENEPRLFVCETVP
VTSDLHSSSQSQAEKEDVTVVTFFVTQEHGLLLQDWQPKPATLLSLLALDTPYYYYICKM
GENGEQSEVISTPTQVSSSPQMVVRRALRDFAGLESCEKPTRDAMLNFSFYLTIGDMDEA
FKAIKLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALRDAEKEPEVEAQVAV
LATQLGMLEDAERLYKSCGRFDLLNKFYRAAGQWQQAIETAETHDRIHLRTTYYSYAKHL
EAMGDKSLALQYYEKSDTHRFEVPRMLMEDNVSLELYINKMKDKDLYKWWGHYLESQSDM
EAALNYYDLAQDYLSQVRVHCYLGNIHKASLIANETGNRAASYHVARQYEGQDEINQSVH
FYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEKGTHMDRAVMLYHKA
GHVSKALELAFATEQFGALQLIAEDLNETSDPALLARCSDFFIKHAQYQKAVELLVAAKK
YNEALQLCLDQSLTITDDLAESLTVPRDSAHLSETVRKELLEKIADCCMRQGNYHLATKK
YTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAGNYLQSLDWRNDAEIMKNIIG
FYTKGRALDLLAGFYEACAEVEIDDYQNYEKAYGALTEACKCLSKMKGRSGDETDGRFLV
LTHRLGLIKKFIQAQRMHEEDPGEAVRLCESLLEEKDLDPAVRVGDVYGFLVEYYCQQGN
FQQAWSKLEDLRSARPSVNLSLYVSQSSLQALQNAAGIRLPYGHTTNTHTGEDDEEVEED
EDINH
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgtactttgatcatcgcattgatgctcctgacagcagaggagatgctgta
ctcatctcatggcactccagtgtttgtgtgctggccgttggatctgtcaacacgtctact
ggaggaagtgttgatctttacctgcaacagggagagcatgtggagttgtgtcatgtggaa
cgaggttttagcccatcgttgcttcagtggcaccctactaaacccctgctggcggtgggc
tgggagacgggagagaccttgctcctctcacacccatctggtgaaaacacaaccctgccg
gcaaacacccacaattcctgtatcacagtgctggagtggagcagtaacggcagcaggctg
gtcacaggagatcaggcaggtgtgatggcggtatggagggtggatgctcgaggtaaactg
cagggatctcctttaataaaacacgactatggtaaaccactgacgtgctgtatcttcaga
tccgccgcgcctgcagaggatgtggcgatgctggcgcgtgcagctgtgagcggcgatgaa
accgctttggacatgttcaactggaaaaagagcactaaaggagccggttttgcgctggga
tcacaggaagggctgtcgttttacatcagcacgattgatgggaatgtgttcagtgtggat
gaacaggcgcggagcgttgcgctgctgtctgttgatagcgcggtgcagaagatgtggttt
tctaagagaaggtccgtcctcgctgtagtaacagattcactcctgctgtctcagttcagt
gtcggaccggagggattcgttcacgagatcagtaaggtaaaactcagtggtagaggtgga
caacacacagatattgtgtggacagaagatggtttgttactcacagcatcaggggaacag
cacatcagactctgggatgtggagttagacgatcactacgccctctctttggaagagtct
ctgggattcgagaaaggagaaatgctcaactgtgtgtctttttgcacttttaaacgcgtt
cttgcagcaggtaccagcagaggccgtgtggcactttggcacatggtgacagtaaatgat
caaaagggagacacaaaaacacagtggaaactccaaacaccagtagaggttgaaggacac
attacacagctgcagtggggttcgagctctcatctgttggcagtgtgcggcagcagttgt
gtgttgattctgtccgagcatgtgatgtgttctcattacagccagcagatggcagcagtg
cagctctcaccaacacagctcagtctttccaacttcaacactaacacacacatcaccttt
cacacagacacacacatcaaagctgtgcaggttaccaaggatatggtcactgtatggaat
gggaaatatatcacagtgtacgagccatcagaacaaactctccacagcacaggttctttc
cagtgtgagtctcctgctctcgcagtacacgaggagaacatttacactgtagaaccaaac
cgtgtccagatccgcacaccacagggtacagtaaaacagttgctggtgttctctgaagca
gaaggaaaccccacgttactgtgtgtatgtggatcttacctggcggtcgggactgatgca
tcacatgtcagagtgtttgatctcacacgcagggaggccaaacctgttggcgtcactaaa
aacctggccgaactcataccggatctgggtgctctgagatctgtcaaatgcaatgctagc
ggcaatcagctgagcgtcctcataacacaggtgaatgggcggcctgacaacaaagtatat
ttttatgatatcgagctggacacgctgacgtatttcgacttcttcacgggacgaccagca
agcagtctgacacaattagaggacagaatgcaatgtgaggtcgagttatctgcccgatgc
cctgtgtctcagttctgggatgagaacgagccacggctgtttgtgtgtgaaaccgttcct
gtgacctccgacctccacagcagcagccaatcacaagcagagaaggaggacgtgacagtg
gtgacgttctttgtgactcaggaacacggtcttctcctgcaggactggcaacctaaacca
gcaacacttctgtctctgctcgctctagatactccatattattattatatctgcaagatg
ggtgagaatggagaacaaagtgaggtgatttctacacccacccaggtgtcttcttcacct
cagatggtggtacggcgagccctccgagattttgccgggttggagagctgtgaaaaaccg
acccgagatgccatgctgaacttcagcttctacctcaccattggagacatggacgaagca
ttcaaagccatcaaactcatcaagagtgaggccgtatgggagaacatggcacggatgtgt
gtgaagagtcgtcggctggacgtggcacgcgtgtgtctgggtaacatgggtaacgctcgt
gccgcccgagctctcagggatgcagagaaggagccagaggtggaggcgcaggtggcagtg
ctggctacacagctgggcatgctggaggatgcagagcgcttgtataagtcgtgcggacgg
tttgatttactgaataagttttatcgagcagctggccaatggcagcaggcgatcgaaacg
gcagagacgcacgatcgcattcatctccgcacgacttactacagctacgccaaacacctg
gaagctatgggagacaagagccttgcactgcaatattacgagaagtctgacacgcaccgg
ttcgaagtaccaagaatgttaatggaggataatgtttcattggagctctacattaataaa
atgaaagataaggatttgtataagtggtggggacattatctggagagccaatcagatatg
gaggcagcactaaattactatgacttagctcaggattatctgtctcaagtgcgcgttcac
tgctatcttgggaacattcataaggcgagtctgatagccaatgagacggggaacagagca
gcgtcctatcacgttgctcggcaatacgaggggcaggatgagatcaaccaatcggtgcac
ttttacacacgagcgcaagcctataacaacgccatccgactgtgtaaagagaataacctg
gacgagcagctcatgaatctggcgctgctcagtaatccagaggatatgatggacacggcc
atgtattacgaagaaaagggaacacacatggaccgagctgttatgctttatcataaggca
ggtcatgtctctaaagcattggagctagcatttgccacagagcagtttggagccttgcag
ctaattgcagaggacctaaatgaaaccagtgatcctgccttactcgcacgctgctcagat
ttcttcataaaacatgctcagtaccagaaagcagtggaattgctagtggctgccaaaaag
tacaatgaagcgctccagttgtgtctggaccagagtttgaccatcaccgacgatctggct
gaaagtctgacggtgccacgagactccgcccatctgtctgaaaccgtccggaaggaactg
ttggagaagatcgccgactgttgtatgcgacagggcaactaccatctagcgactaaaaaa
tacacccaggccggcaataagatcaaggcaatgcgagcgctgttaaaatctggagacacg
gagaaaatcgtgttttttgcaggcgtgtccagacagaaggaaatctacgtcatggcaggc
aactatctgcagtctctggactggaggaacgacgcagagatcatgaaaaacatcattggc
ttctacaccaaaggtcgcgcccttgacctcctcgccggcttttatgaggcctgtgctgag
gtggaaattgacgactatcagaattacgagaaggcgtacggcgctctgacagaagcttgt
aagtgtttgtcgaaaatgaagggtcgcagcggagacgagactgatggcaggtttctcgta
ctaacacacagactcggacttatcaagaaattcattcaggcacagagaatgcatgaggag
gatccaggtgaagcagtgcgtttatgtgagtctctgctggaagagaaagatctggaccct
gctgtacgtgtgggtgacgtctatggctttttagtcgaatactactgccaacagggcaac
ttccaacaggcatggagtaaactggaggatctcaggtcagcacgtcccagtgtaaatctg
agtttatatgtgagtcaaagcagtctacaggcgctacagaacgctgctggaatccgtctg
ccgtacggacacacaacaaatacacacacgggtgaagatgatgaagaggtggaggaagat
gaggacatcaatcactga
DBGET
integrated database retrieval system
