Misgurnus anguillicaudatus (oriental weatherfish): 129425870
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Entry
129425870 CDS
T09481
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129425870 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manu03032
]
129425870 (topbp1)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129425870 (topbp1)
DNA replication proteins [BR:
manu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
129425870 (topbp1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129425870 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
129425870
NCBI-ProteinID:
XP_055037892
LinkDB
All DBs
Position
20:complement(16909973..16935342)
Genome browser
AA seq
1522 aa
AA seq
DB search
MSKENKDAYIVKFVEHNGEKADLALQAYKAIVELQSEKYVQMIDEQTALELDHNDKSLFV
FSDFTSNAFEHCRGLRCRIVSPLVVLFCLQKQRCVPKAEQPVYSMAMADVTISCTNLDKE
ARSEVMDLVQLMGGRVYRDLNVSVTHLVAGEVGSKKYLVAASLEKPILLPSWIKACWEKS
QDSVFHHSELNIEDYRCPVLKGCTVCVTGLSTVERKEVQRLCEQNGGCYTGQLKMNECTH
LIVSEPTGQKYEFARKWNVYCVSLHWLFDSIEKGFCQDESRYAVEKRKTEEKPGRPNTST
PTGTSKNKEEGPSLLGLSHISNISMNVNETALTTACISHIETPDPIDSFDITVCRVDDLL
DGCKLYLCGLSGKKLEKLRRMVNSAGGLRFNQPGQELTHIVMGEPDQGVKVFLEKATHRP
HIVTVQWLLESFSRGTLLPEDAYFHPSFLPPAPAAVDMPAPRSSSSRTSRPSVAPPPAPS
PARQVRAEEELLSQYVENDQTVVELPQAANSTTGRQSILLPDPPTIGQDSTMCEASEGGL
FSGKRFLLVGFGAEAEAQLSELIMENSGKILVGRSRAVAHYAIVPLLGCDVEATVDEVAT
DTWLAMCVEQQSVLALSSHPLFTPVTMREGFSPLKDCVLSVSQFTGAERDSLIQLAKHLG
ASVQDYFVRTANQRKGMLASTHLVLQTPEGTKYQAAKKWSLPAVTIRWVLESARTGKRAD
EGRYLVDLPPSPERTEDSFVGASQRDPAPLRIPQRSPELPLLGLQNSAAITPLDTARFQS
RTVRSAVRKMKQGEEQQMEVVTPGQEDARSALQKDSSLHLDTPSRFLSRDRLFGPSFNTK
DVFDHLQTPGNKPQEGKGAETPLSEVIERNLKAAVANSNRSHVTNLAAMTASPQLGKVPE
PEVEQKMTAPLTGVVVCVSKKLSKKQSELNAVAASLGADFRWSCDDSVTHYIYQGKVGDN
SKEYRAVKERGIHIVSEHWLQACADEQKRVSESLFPFTFNPKMSLTMSQIADCTQRSPPP
STPRTRLRTFAEDEETRLGALDDITDISTPKRVSMDGPEKEQKPTSNDKRDLTETLEMRE
NFQRQLQEIMSATKMTNGRRGSTRLTRAGSGSLDSPHTPDSLGRIGRRSRNLEAIRMSRQ
VAMDLNTEPSQSEQIVWDDPTAREERARLADNLQWPGSPSQHSEPLTVIPPPPSDQTKNA
RDSMTDSELVEMAAFEVIDAQLRPKVTPPRGNISQNPETPEAPSIAFPVSKPAAPPQIEL
EEESEEEIKEEPPRFLLSSLNPQERIDYSHLIEELGGVVLEKQSFDPSCTHVIVGYPLRN
EKYLAAMAAGKWVLHRSYLEACRAEGRFIQEDQYEWGSSSILDVLTSINSQQKRLALAAM
RWRKTLQGCTTKEGAFGGWTVMLNIDQAREAGFRRLLQSGGAKVLPDASPSLYKETSHLF
VDFSRLKPGDVRVDVSEAAAYGVKCLKPEYIADYLMQEPSPPIEAYYLPGAAPDDTDKVH
DTSSRKRKASGEISTLKKSRVR
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaaacaaggatgcatacattgtaaaatttgttgaacacaatggagagaag
gctgatctggctctacaggcctataaggcaatagtagaactgcagtcagagaaatatgtg
cagatgatcgatgaacaaacagcactagagttggaccacaatgacaaatccctgtttgtc
tttagtgacttcaccagtaatgcttttgagcactgcagggggctgagatgcaggatagtg
agtccgctggtagtgttattctgtctacagaaacagaggtgtgttcctaaagcagagcag
cctgtctatagcatggccatggctgatgtcaccatctcctgcaccaaccttgacaaggag
gcacggagcgaagtgatggatcttgtccagctgatgggtggccgtgtctaccgtgatctt
aacgtgtctgttacgcacctagtggcgggtgaagtggggagtaaaaaatacttggtcgct
gcaagccttgagaaacccatccttctccctagctggataaaagcatgctgggaaaaatct
caggatagtgttttccatcactctgagctgaatattgaggactatcggtgcccagtccta
aaaggctgtacagtatgtgtgacgggtctttctactgtcgagcgtaaagaggttcagagg
ttgtgtgagcagaatggaggctgctacaccgggcagcttaagatgaacgaatgcactcat
ctcattgtcagcgaacccacaggtcagaaatacgagtttgcccgtaagtggaatgtgtac
tgcgtgtccctgcactggctctttgacagcatagagaagggcttctgtcaggatgagagc
aggtatgctgtggagaagaggaaaacggaggagaaaccgggcagacccaacacctccacc
cctacaggaaccagcaaaaacaaagaggaaggtccttcacttttgggattgagccatatc
tccaatatcagcatgaatgtgaatgaaactgcactcaccacggcgtgcatcagccacata
gagactcctgatccaatcgattcatttgacataactgtctgccgagttgatgacctgttg
gatggctgtaagctgtacttatgtgggctgtctggaaagaaactggagaaactgcggcgg
atggtgaactctgctggaggcctgcgcttcaaccagcccggccaagagctcacacacata
gtgatgggtgaaccagaccagggtgtcaaagtcttccttgaaaaagccactcacagacct
catatagtcacagtgcaatggctgctggagagtttttcccgtggtactctgctcccagaa
gatgcctactttcacccctccttcctgccacctgccccagccgctgttgacatgccagct
ccccgcagttcttcctcccgcacctccagaccctcggtagctccgcctcctgctcccagt
ccagcccgacaggtccgagcagaggaagagttgctttcacaatacgtagaaaatgaccaa
actgtggtggagctccctcaggctgctaatagcaccaccggaaggcagagcattcttctt
ccagatcctccaactatagggcaagactctactatgtgtgaagcctcagaaggaggcctg
ttttctgggaagcggttcctcttggttggatttggagccgaggcagaagcccagctctcg
gagctcatcatggaaaactctgggaagattttggttggccgctcgagagcagtggcgcac
tacgccattgtcccgctgctgggctgtgacgtggaagccacagtggatgaggtcgcaaca
gatacatggctggccatgtgtgtagagcagcagagtgtgttggcactgtcatctcatcct
ctcttcactccggtgactatgagagagggtttctctcctctcaaagactgtgtgctgtct
gtcagtcagttcactggagcagagagagactctctcattcagttggccaaacacttggga
gccagtgttcaggattattttgtgcgaactgctaaccagaggaagggaatgctggctagc
actcacttggtactccagacaccagagggcacaaagtaccaggctgccaagaaatggagt
ctgcctgcagttaccatccgctgggttttagagtctgcaagaacagggaagagggccgac
gagggacgctacctggttgacctaccaccttctccagagagaacagaggacagtttcgtt
ggggcatctcagagagacccagcacctctgcgtatcccgcagcgctccccagagctccct
ctactgggcctgcagaacagcgcagcaatcaccccactagacactgctcgatttcagagc
cgcaccgttcgctcggcagtcaggaagatgaagcagggagaggaacagcagatggaagta
gtgaccccaggacaggaggatgccagatcagcacttcagaaagactcctccctccatcta
gacactccctcacgattccttagcagagatcgactattcggaccttcatttaacacaaag
gatgtatttgatcatttacaaactcctggtaataagcctcaggaaggtaagggggcagag
acgcctctatccgaggtcattgaaaggaacctgaaagctgccgtcgccaacagcaatcgc
agtcatgtgacaaatcttgcagccatgacggccagtcctcaactgggaaaagtgcctgag
cccgaggtggagcagaaaatgacagctcccctcaccggcgtggtggtgtgtgtgagtaag
aaattaagcaagaaacaaagtgaactcaatgcagtggctgcctctctgggagcagacttc
aggtggtcatgtgatgactcggtcactcattacatctaccagggtaaagtgggagacaac
agtaaagaatacagagctgttaaagagagaggaatacatatagtgtctgaacactggcta
caggcgtgtgcggatgagcagaagcgtgtatctgaatcactcttccctttcaccttcaac
cccaaaatgagcctgaccatgagtcagattgcagactgcacccagaggtcaccacctcct
tccactccccgcaccagactcagaacatttgcagaagatgaagagacccggctgggcgct
ttggatgacatcacggacatctccaccccaaagcgagttagtatggatgggcctgagaaa
gagcagaagcccaccagcaatgacaaaagagatctcacagaaacactagagatgagagag
aattttcagaggcagcttcaggaaatcatgtctgctactaaaatgaccaatggtcgtcga
ggctccacacgattgaccagagcaggctcagggagtctggactcgccccacacccccgac
agcttgggacgaataggcagacgcagtcgtaatttagaagccatacggatgtcacgtcag
gtggctatggacctaaatacagaaccatctcagagcgaacagatcgtttgggacgaccca
accgctcgagaggagagagcccgattagctgataacttgcagtggcctggcagcccctcc
cagcactctgagcccctcaccgtcatcccaccacccccttctgaccagaccaaaaacgcc
agagactccatgactgactctgaactggtggaaatggctgcattcgaagtcatagatgca
caactgcgtccgaaagtgactccaccccgaggcaacatttctcaaaaccctgaaacaccc
gaagcacctagcattgctttccctgtctctaaacctgcagcacctccacagattgagtta
gaggaagaaagtgaagaggagataaaggaggaacctccacgttttcttttgtcttcgttg
aatccacaggaacgcattgactacagccatcttatagaggagctaggtggtgttgtgcta
gagaagcagagtttcgaccccagttgcactcatgtgattgtgggttatcccctgaggaac
gagaaatatctggctgctatggcagcgggcaagtgggtcctccaccgctcatacctagag
gcctgccgcgcagagggacgcttcatacaggaggatcagtatgaatggggaagcagctct
atactggatgttctgacatccatcaactctcaacagaagagactggcgctggcagccatg
cgatggagaaaaacactgcagggctgcacaaccaaagagggagcatttggtggctggact
gtgatgctaaatattgaccaagccagagaggctggattcagacgtcttctacagtcagga
ggagctaaggttttgccagacgcttctccctctctgtataaggaaacctctcacctgttt
gtagattttagtcgattaaagccgggtgatgtcagagtggacgtgagcgaggccgcagct
tatggggtgaaatgtcttaaacccgagtacatcgctgattacctcatgcaggagccatcg
ccgccaatagaggcttattatcttcccggtgcagctccagatgatacagacaaggttcac
gatacatcttcacgtaaacgcaaagcctctggagaaatatccacattaaagaagagtcgt
gttcgatga
DBGET
integrated database retrieval system
