KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129425970
Entry
129425970         CDS       T09481                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    129425970 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:manu03400]
    129425970 (wdr48a)
DNA repair and recombination proteins [BR:manu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     129425970 (wdr48a)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_Vps41 WD_LRWD1 WDR54 WD40_RFWD3 RAWUL Beta-prop_NUP159_NUP214 WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 129425970
NCBI-ProteinID: XP_055038051
LinkDB
Position
20:complement(35925381..35936645)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSAEPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSTPLTPMCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNSVAYWDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMDEDTELNHASVNGEHESRIQKGNGYFQVPAHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDSESQTGGSAAEKPSEQKEDEDVSVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcgtatgtc
atccgagatgaagttgagaaatataaccgtaatggagtcaatgcactacagctggatcca
gcccttaaccgtctcttcactgctggtcgagactcgatcatcaggatatggagcgttaac
cagcacaagcaggatccatacattgcatcaatggagcatcacacagattgggtgaatgac
atcgtcctctgctgtaatgggaaaacattgatatcggcctcctctgacactacagtaaag
gtttggaacgcacacaagggcttctgtatgtcaacgctgagaacacataaggactatgtt
aaagcgttagcgtatgctaaagataaagagttggtggcctccgccggactggacaggcag
atctttctttgggacgtgaacacgcttacggctttaaccgcctctaataacactgttact
acatcatctctcagcgggaacaaagactccatctacagtttggccatgaatcagatggga
actgttatcgtgtctggatcaacggagaaggttctgagagtgtgggacccgcggacctgt
gccaaactcatgaagctaaagggacacacggacaatgtgaaatcgctgctgttgaacaga
gacggcactcagtgtctttcaggcagttcggacgggacgattcggctgtggtcattgggt
cagcagaggtgtatcgccacgtaccgcgttcacgatgagggcgtctgggctttacaggtc
aacgaagccttcacgcacgtctactccgggggtcgtgaccgtaagatatactgcacagac
ctgcgtaacccggatatccgtgtgctcatatgtgaggagaaggcgcccgtgttgaagatg
gagttggacagatcagctgaaccacattctgccatctgggtttctaccaccaagtctaca
gtaaataagtggtctctgaagggaattcataatttccgtgcgtctggagattatgacaac
gactgtagcactccactgacacctatgtgtacacagcctgaacaggttattaaaggtgga
gccagtataatccagtgtcacattctgaatgacaagagacacattctcaccaaagacacc
aacaacagtgtggcatactgggatgtgctgaaggcttgtaaagttgaagacttgggcaag
atggagtttgatgaagaaatcaaaaaacgctttaagatggtttatgtgcccaactggttt
tccgtcgacctcaaaacagggatgttgactataacattggatgagagcgactgttttgcc
gcttgggtttcggctaaagacgcaggattcacgagccccgatggatcggatcctaaactg
aatctgggcggtctgttgcttcaggctctgttagagttttggccacgcacgcacatcaat
ccaatggatgaggacacagaactgaatcacgccagtgtgaacggtgaacacgagagcagg
atacagaaaggcaacggatatttccaggttccagcgcacactccggtcatcttcggcgag
gcgggaggcagaacgttattccggctgttgtgtcgtgactcgggaggtgagactgagtcg
atgttactgaacgagaccgtcccgcagtgggtcatcgacatcacagtggacaaaaacatg
cccaaattcaacaaaatccctttctacctgcagccccattcatcctctggagccaagaca
ttaaagaaggatcgactgtcggccagtgacatgttacaggtgaggaaggtgatggagcac
gtctatgagaagatcatcaacctggacagcgagtcgcagacgggcggttcggctgcggag
aaacccagcgagcagaaggaggatgaagacgtctcggttttagcagaagaaaagattgag
ctgctgtgtcaagatcaggttttggatcccaacatggacctgcgaacggtgaagcatttc
atctggaaaagcggaggcgacctgacgcttcactaccggcagaagtccacgtga

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