Entry |
|
Symbol |
ushbp1
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Name |
(RefSeq) colorectal mutant cancer protein isoform X1
|
KO |
K21881 | Usher syndrome type-1C protein-binding protein 1 |
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Organism |
manu Misgurnus anguillicaudatus (oriental weatherfish)
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Brite |
KEGG Orthology (KO) [BR:manu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:manu03037]
129427116 (ushbp1)
Cilium and associated proteins [BR:manu03037]
Primary cilia and associated proteins
USH complex and associated proteins
129427116 (ushbp1)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
14:10548254..10579312
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AA seq |
738 aa
MGVYDNQGSNLLESRFATIAAVCFICLCCALSHMLTERWDQRNAQIQHTVEQLTVFKKPG
AFLHPQPHLSERKLYRTLINIRNMTEQGSDGLISADCELAQCETEVSTLLQIISDLNRKM
DSLIPRETQACEAPVQVSGCVIQPSLTSPACSLAAVDTGTTSVEPETRKKSKSSEGGSSD
PWTELQQILVALETSSGQGRKMHNLQTQDAERVQANHLSAAQETWVHATQVLEEMESDLG
ITYPSALPPDERRQYQRDTLSLYKQNQDLSASLKSRQEELKGAERTLVDLEDEKNWLQQK
LADLKKKWMYRVSQSPPLSPSLSSSRTSSPCFSSPPYPGSPLLPRKLSSSSPDSPPSPRT
VDSVLQSEIDKLQRCLERLKARNERLNAALFRRKGESEQLSMSLSRHEADSSALHMALTY
CEECEEAYSDLYSLYEAKLQQNADAFRPQSDASMSPVEKIDLRIKSSSSTPEGTTEPRPG
SLSEEEFEDKTGVILQRISRLKQDRAAVCIPQQGEAGEGKISPDTGTLAGVRGRTNSLSK
NTKQEKAALMYELVTVREEMSELRGNLRLLDKDRRCLELALMVQSDQDSAEALILDSLRE
ELSDRRATQQRIAENRVKLDSGGGIPGPRNHSLLRELQAALQREQAMRKRVTALRESLDS
TLTDSTNQRRINRDEIARLTLRFNKILSTYRNSRKKHQEQLWRLEKQILSMSERYATREA
GLNATLEAMECRKEETVL |
NT seq |
2217 nt +upstreamnt +downstreamnt
atgggcgtgtatgacaatcaaggtagtaatttattagaaagcaggtttgccacaatagca
gctgtgtgtttcatctgtctgtgctgtgctttatctcacatgcttactgagaggtgggac
cagagaaacgctcagatccaacatacagttgaacagctaacagtcttcaaaaaacctgga
gctttccttcatcctcagcctcatctttcagagaggaaactttacaggaccctcatcaat
ataagaaacatgacagagcagggatcagacggtctgatatcggcagactgtgaactggca
cagtgtgagacagaggtcagcactttactgcagattatctctgacctcaacaggaagatg
gactcactaataccacgagaaacccaagcatgtgaagctccggtacaggtcagtgggtgc
gttatccagccgagtctgacgtctccagcatgcagcctcgcagcggtggacactggcaca
acatctgtggagcctgagaccaggaaaaagtccaagagctcagaagggggcagcagtgat
ccttggacagaactgcagcagattcttgttgctctggagacctctagtggccaggggagg
aagatgcacaatcttcagactcaggatgccgagagagtccaggccaatcatctgtctgca
gcccaagagacctgggttcatgccacacaggtgctggaggagatggagagtgatctgggg
atcacgtacccctctgctttgccccctgatgagagacgtcagtatcagcgggacaccctc
tcactgtacaaacagaaccaagacctcagcgcctccttgaagagccgtcaggaagaactt
aagggtgctgaaaggactctggtggaccttgaagatgaaaagaattggctacaacaaaag
ttagcggatcttaagaagaaatggatgtacagagtgagtcagtctcctcctcttagtcca
tcactatcctccagtcgaacctcgagcccttgcttctcctcacccccgtatcctggatct
cctctgctgccccggaagctgtccagctcctccccggactctcctccgtccccccgcact
gttgattctgtgctgcagtctgagattgacaaactgcagaggtgtttggagcgtctgaaa
gctcgaaatgagcgcctgaacgcggctctgttcagaaggaaaggagaatcagaacagctg
agtatgagtctcagtcgtcacgaggccgacagctccgctctacacatggctttaacttac
tgtgaggagtgtgaagaggcttacagtgacctgtattccttgtacgaggccaaactacaa
cagaacgcagatgcatttagacctcagtccgacgcctcaatgtcaccggtggaaaaaata
gacttgagaataaagtcatcctccagtacaccagagggcaccactgagccaagaccaggc
agtttgtcagaggaggagtttgaagataagacaggtgttattctgcagaggatctccagg
ctgaaacaggacagggcggctgtgtgtatcccacagcagggtgaggcgggtgagggcaag
atcagccctgacactggcacgcttgcaggggtcagaggtcgcaccaattcgctttccaaa
aacaccaaacaggagaaagctgctctgatgtatgaactggttacagtcagggaagagatg
tcagagctgcgtgggaacctcaggctcctggataaggacaggaggtgtttggagttggcg
ctgatggttcagagtgaccaggactcagctgaagctctgattctggacagtctgagagaa
gagctgtcagataggagagccacccaacagagaattgctgaaaatcgagtaaaactggac
agtggaggtgggataccaggcccacgcaatcactctctactgagagagctacaagcagcc
ctgcagagagagcaggcgatgaggaagagggtgacggctttacgtgaatctctggactcg
acgcttacagacagcactaaccagaggagaatcaaccgagatgagatcgcacgcctgaca
ctgcgattcaataagatcttaagcacctacaggaattcccgtaagaaacaccaggagcag
ctgtggcggctggagaaacaaatcttgtccatgagcgaacgctatgccacccgagaggcc
gggctgaacgccacactggaggctatggagtgcaggaaagaagaaacagtgctgtag |