KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129427116
Entry
129427116         CDS       T09481                                 
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein isoform X1
  KO
K21881  Usher syndrome type-1C protein-binding protein 1
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:manu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:manu03037]
    129427116 (ushbp1)
Cilium and associated proteins [BR:manu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   129427116 (ushbp1)
SSDB
Motif
Pfam: USHBP1_PDZ-bd
Other DBs
NCBI-GeneID: 129427116
NCBI-ProteinID: XP_073731955
LinkDB
Position
14:10548254..10579312
AA seq 738 aa
MGVYDNQGSNLLESRFATIAAVCFICLCCALSHMLTERWDQRNAQIQHTVEQLTVFKKPG
AFLHPQPHLSERKLYRTLINIRNMTEQGSDGLISADCELAQCETEVSTLLQIISDLNRKM
DSLIPRETQACEAPVQVSGCVIQPSLTSPACSLAAVDTGTTSVEPETRKKSKSSEGGSSD
PWTELQQILVALETSSGQGRKMHNLQTQDAERVQANHLSAAQETWVHATQVLEEMESDLG
ITYPSALPPDERRQYQRDTLSLYKQNQDLSASLKSRQEELKGAERTLVDLEDEKNWLQQK
LADLKKKWMYRVSQSPPLSPSLSSSRTSSPCFSSPPYPGSPLLPRKLSSSSPDSPPSPRT
VDSVLQSEIDKLQRCLERLKARNERLNAALFRRKGESEQLSMSLSRHEADSSALHMALTY
CEECEEAYSDLYSLYEAKLQQNADAFRPQSDASMSPVEKIDLRIKSSSSTPEGTTEPRPG
SLSEEEFEDKTGVILQRISRLKQDRAAVCIPQQGEAGEGKISPDTGTLAGVRGRTNSLSK
NTKQEKAALMYELVTVREEMSELRGNLRLLDKDRRCLELALMVQSDQDSAEALILDSLRE
ELSDRRATQQRIAENRVKLDSGGGIPGPRNHSLLRELQAALQREQAMRKRVTALRESLDS
TLTDSTNQRRINRDEIARLTLRFNKILSTYRNSRKKHQEQLWRLEKQILSMSERYATREA
GLNATLEAMECRKEETVL
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgggcgtgtatgacaatcaaggtagtaatttattagaaagcaggtttgccacaatagca
gctgtgtgtttcatctgtctgtgctgtgctttatctcacatgcttactgagaggtgggac
cagagaaacgctcagatccaacatacagttgaacagctaacagtcttcaaaaaacctgga
gctttccttcatcctcagcctcatctttcagagaggaaactttacaggaccctcatcaat
ataagaaacatgacagagcagggatcagacggtctgatatcggcagactgtgaactggca
cagtgtgagacagaggtcagcactttactgcagattatctctgacctcaacaggaagatg
gactcactaataccacgagaaacccaagcatgtgaagctccggtacaggtcagtgggtgc
gttatccagccgagtctgacgtctccagcatgcagcctcgcagcggtggacactggcaca
acatctgtggagcctgagaccaggaaaaagtccaagagctcagaagggggcagcagtgat
ccttggacagaactgcagcagattcttgttgctctggagacctctagtggccaggggagg
aagatgcacaatcttcagactcaggatgccgagagagtccaggccaatcatctgtctgca
gcccaagagacctgggttcatgccacacaggtgctggaggagatggagagtgatctgggg
atcacgtacccctctgctttgccccctgatgagagacgtcagtatcagcgggacaccctc
tcactgtacaaacagaaccaagacctcagcgcctccttgaagagccgtcaggaagaactt
aagggtgctgaaaggactctggtggaccttgaagatgaaaagaattggctacaacaaaag
ttagcggatcttaagaagaaatggatgtacagagtgagtcagtctcctcctcttagtcca
tcactatcctccagtcgaacctcgagcccttgcttctcctcacccccgtatcctggatct
cctctgctgccccggaagctgtccagctcctccccggactctcctccgtccccccgcact
gttgattctgtgctgcagtctgagattgacaaactgcagaggtgtttggagcgtctgaaa
gctcgaaatgagcgcctgaacgcggctctgttcagaaggaaaggagaatcagaacagctg
agtatgagtctcagtcgtcacgaggccgacagctccgctctacacatggctttaacttac
tgtgaggagtgtgaagaggcttacagtgacctgtattccttgtacgaggccaaactacaa
cagaacgcagatgcatttagacctcagtccgacgcctcaatgtcaccggtggaaaaaata
gacttgagaataaagtcatcctccagtacaccagagggcaccactgagccaagaccaggc
agtttgtcagaggaggagtttgaagataagacaggtgttattctgcagaggatctccagg
ctgaaacaggacagggcggctgtgtgtatcccacagcagggtgaggcgggtgagggcaag
atcagccctgacactggcacgcttgcaggggtcagaggtcgcaccaattcgctttccaaa
aacaccaaacaggagaaagctgctctgatgtatgaactggttacagtcagggaagagatg
tcagagctgcgtgggaacctcaggctcctggataaggacaggaggtgtttggagttggcg
ctgatggttcagagtgaccaggactcagctgaagctctgattctggacagtctgagagaa
gagctgtcagataggagagccacccaacagagaattgctgaaaatcgagtaaaactggac
agtggaggtgggataccaggcccacgcaatcactctctactgagagagctacaagcagcc
ctgcagagagagcaggcgatgaggaagagggtgacggctttacgtgaatctctggactcg
acgcttacagacagcactaaccagaggagaatcaaccgagatgagatcgcacgcctgaca
ctgcgattcaataagatcttaagcacctacaggaattcccgtaagaaacaccaggagcag
ctgtggcggctggagaaacaaatcttgtccatgagcgaacgctatgccacccgagaggcc
gggctgaacgccacactggaggctatggagtgcaggaaagaagaaacagtgctgtag

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