Misgurnus anguillicaudatus (oriental weatherfish): 129427526
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Entry
129427526 CDS
T09481
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129427526 (rbm39a)
Spliceosome [BR:
manu03041
]
Common components
Common spliceosomal components
General mRNP proteins
129427526 (rbm39a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
PRP38_assoc
RRM_occluded
RRM_5
RSRP
RBD_DEAH11
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
129427526
NCBI-ProteinID:
XP_055040029
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All DBs
Position
14:21309842..21315838
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AA seq
525 aa
AA seq
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MADDLDIEAMLEAPYRKDDNKSLSTNGHEERSKKKKKSKSRSRSKSRERKRSKSRDRKKS
HDRRRSRSKDRKRSRSKERRRSRSRSRERGGRYKPPFSGLKFNGGPRGKAGPPPAIKLSR
RRSRSRSPFKKDKSPVRLPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGNSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHC
FQLSNMFNPNSENEHGWEVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPTIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctagaggctccttacagaaaggatgacaac
aagtccttaagtaccaatggccacgaggagcggagcaagaagaaaaagaagagcaagagt
cgcagcagaagcaagagccgggagaggaaaagaagcaaaagccgtgatcgtaagaagagt
catgaccgcagacggagtcgcagtaaagaccggaagcgcagccgcagcaaagagaggcgc
cgtagccgttccaggagcagggagcgtggcggtcgttacaaacctcctttttctggcctg
aaatttaacggtggtcccagggggaaggctggccccccacctgccatcaaactaagccgc
agaaggtccagaagccgcagtccgttcaagaaagacaaaagccctgtgagactgcctatt
gataacctcacgcccgaggagagggatgcacgcacagtgttctgcatgcagctggcagca
agaatccgaccacgagacctggaggaattcttttctgcagtgggaaaagtgagagatgtg
cgaatcatttctgacagaaactccagaagatcgaagggtattgcttacattgagtttgtg
gattccacctctgtacctttggctattggcctgtccggacaaagacttcttggagtacca
ataattgtccaggcttcacaggctgaaaagaacagagctgctgctttggccaacaacttg
caaaagggcaattcaggacccatgagactgtatgtcggctcattgcattttaacataaca
gaggacatgctcagagggatctttgaaccatttggaaggatcgatagtattcaactgatg
atggacagcgaaacgggaagatccaaaggatacggcttcatcacattttctgatgctgaa
tgtgctaaaaaggctctggagcagcttaatggctttgagttagccggcaggccgatgaaa
gtaggacatgtgacagagcgtactgacgcatccactgcaagctccttcctggacaatgat
gagctggaaaggacaggcattgatctgggaacaactggaagacttcaactaatggccaga
ctggctgagggtactggtctgcagattccacccgctgcacagcaggcacttcagatgagt
ggctcaatggtagccatggctgctgctactgctgctatgaaccctgggttgagttttaac
attaatgtgcccacaaaccaagctttgaatctaccatcccaaccaatcgcaacgcactgc
ttccagctttccaacatgttcaatccaaactcagaaaatgagcatggttgggaagttgaa
attcaggatgatgtcattgaggagtgtaacaaacatggaggagtcattcatatatacgtg
gacaagaaatccgccgaaggtaatgtctatgtgaagtgtccaaccattcctgctgccatg
gctgcagttagtgcattacatggacgctggtttggaggtaaaatgatcacagcagcttac
gtccctcttcctacatatcacaaccttttcccagagtctgtgcaagccacacagcttctt
atgccgagtcgccggtga
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