Misgurnus anguillicaudatus (oriental weatherfish): 129427582
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Entry
129427582 CDS
T09481
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
manu04515
]
129427582 (pcdh17)
Cell adhesion molecules [BR:
manu04515
]
Cadherins
Protocadherins
129427582 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
129427582
NCBI-ProteinID:
XP_055040127
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All DBs
Position
14:complement(27052777..27142989)
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AA seq
1138 aa
AA seq
DB search
MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCKQNSKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFDQPSYVV
EIPENSPLGMVLIDLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKID
YEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAAAPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVSPVVELIIKVTDHGKPTLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPNANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSVIQTDNFPAESNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQDEDCVNCTDECRVLGHSDRCWMPQFPAAGAGGAGTPQAEGSDYRTNLFVPAGMEAV
AVETEPYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSP
SKGCNTGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYISPNKQNKEQGYSTLPSSDPVAKV
LAEARSRISQETAVNMDCVLEQGGGEMGRGTMDTDQVVRDIDKLLQDCRGSENTPIRK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacattaaaaaac
ttgaactactcgatacccgaagagaaaattcagggtgtcattggaaacattgccaaggat
gccgagctggaactgggggagcaggggaaaaaatccaactttagggtgttggagaactct
gcgccacatctcatagatgtggatcccgaaagcgggctactatacacaaaacagcggatc
gacagggaaacactgtgtaaacaaaattctaagtgccagctctccatggaagtgtttgcc
aatgacaaggagatctgcatgattaaagtcgaaatacaggatataaatgataatgcacca
agctttccttctgatcagatcgatattgacatttctgaaaatgcagccccgggcacacgt
ttccccttggctgctgcctacgaccctgacacgagagaaaacggcctgaaaacatatcag
atcacacgggatgattacagtatattttctctggatgtgaaatccagaggggatggaact
aaattccctgaattggttgttcagaggtccttagatcgagaggagcgcagccatcacact
ttaattattactgccactgacggaggggaatatcctaaatcagggacaatgcaaatcaat
gtgaaagtcactgattccaatgacaatagccctgtgtttgaccaaccctcatatgtagtg
gagattcctgagaattcacctctaggcatggtattgatagatttaaatgccacggatcct
gatgaagggattaacggccaggttacttattcctttagctgttatgtcccagacaggatc
aaagagttgttttcaatagacccccgaacgggtgtcataaagattcagggtaaaatcgac
tatgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaacccg
attcctggccattgtaaagtcaccgttaaagtgctcgacaggaatgacaactggccctct
ataggtttcgtggcagtacgtcagggggcggttagtgaagcggcagccccagggacagtg
atcgctcttgtgagagtcacagacaaggactctgggcgcaacgggcagctccagtgtagg
atcttaggcaatgtgccttttaagttagaggagaactatgataatttttacaccgtggtg
acagacagaccactagacagagaagtcaaagatgagtataacatcactattgtggccaaa
gacaatggcaacccgcccctgaactcaaccaagtcttttactgttaaaatcttagatgaa
aacgataacgcacctcgcttcacaaaaatggtctatctgcttcaggtgcccgaaaacaac
atcccaggggaataccttggctcggttctggctcatgacccagatttgggccaaaatggt
actgtgtcctattccctccttccctctaatgtgagcgaggaatctatcaccacatatgtt
aacattaaacccactgacggtgccatttatgcactgaggagtttcaattatgagcaaaca
aagtattttgattttaaagtccaggcaaaagattccggtaatcctcacctggagagcaac
accactgtccgtgtgagtgttctggatgtcaatgacaacattcccgtcatcgtgcttcct
ctacttcagaacgatactgctgagatccacgtaccacgaaatgtgggagtcggtcacatt
atcaccacggtgagagcggtggacaatgacttcggcgagagtggtcggctcacctacgag
atctcggatgggaacgaggaacacctgtttgagatcgattcggtgacgggcgaagtacgg
acagctcagccattgtgggaggaggtgtcacctgttgtagaactcatcatcaaggtgacc
gaccacggcaaaccaacgctctcagccatggcgaaactcatagtcaaagcctactccggc
cccctaccagagggtgaaccgcggatcaacgccgaacaccacaactgggacatgtcgctc
ccattaatagtgaccctgagtatcatctccatcatgctcttggcggctatgatcaccatc
gcggtcaagtgtaaacgcgagaacaaggagattcgcacgtacaactgccgcattgccgag
tacacccacccgcaactgggtaaaggcaagaaaaagaaaatcaacaagaacgacatcatg
ctagtgcaaagcgaagtggaggagcgagataccatgaatgtcatgaacgtggtgagcagc
ccatctctggccacatcgcccatgtactttgactaccaaacacgtctacccctcagctct
ccaaggtccgaggtcatgtatctcaaacccaatgccaacaacctcagcgttcctcaaggg
cacgtcggatgccacaccagcttcacgggacctgtcacgaataccacagagacaccagtg
aacaggatgtcggtaattcagacagataattttcctgctgagtccaattacatgggtaac
aggcagcagtttgttcaaagcagctccactttcaaagatccagagcgtgccagtctcaga
gacagcggacatggggacagcgaccaagcggacagtgatcaggacactaataaaggctcc
tgctgtgacatgtcggctaaggaagcgctcaagatgaaggccactggcctgaagccacaa
ccgctcgagcaggacgaggattgtgtgaattgtacagatgagtgtcgagtgctgggtcac
tccgatcgctgctggatgccccagtttccggcagcgggggccggaggagcaggaactccc
caggccgagggctcggactaccgcaccaacctctttgtcccggccggcatggaagctgtc
gccgtcgaaaccgagccctacgagacggtttgcaatcccaacggcaaaaagacattctgc
acgttcgggaaggaacgccgagaccacaccatccttgtggcgaatgttaaaccctatctt
aagaccaaacgtgccctcagtcctctgttgcaagaggtcccttccgcctcatgcagtcca
tccaaaggctgtaatacaggttccccttgttcttcagccaaaggtatgggcgacggagcg
gaaggcaagccaagcaccagccactatggacctccagatggacagtacatctcacccaac
aagcagaacaaagagcagggttactcgactctgccttcttccgacccagtggccaaagtc
ttggctgaggcacgttcgcggatcagccaggagacggcggtgaacatggactgtgtcttg
gagcagggcggaggagagatgggtcgtggcaccatggatacagaccaggtggtcagggac
atcgataaactgctccaggattgtcggggaagtgaaaacacccccatcagaaagtaa
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