Misgurnus anguillicaudatus (oriental weatherfish): 129427855
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Entry
129427855 CDS
T09481
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129427855 (helz)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
129427855 (helz)
3'-5' decay
Other 3'-5' decay factors
129427855 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
ResIII
UvrD-helicase
PAM2
zf_CCCH_4
PhoH
Mov-10_helical
AAA_22
AAA_16
zf-CCCH_4
AAA_5
Zn_finger_prot
AAA_7
Motif
Other DBs
NCBI-GeneID:
129427855
NCBI-ProteinID:
XP_073712938
LinkDB
All DBs
Position
19:complement(6106386..6187499)
Genome browser
AA seq
1893 aa
AA seq
DB search
MEDRRPQKSCDEAIGSLVRQEYEAAVAHSTEALLAMGPRTPTPGTTLLRKRALLYRIAAR
LQLKDYDQADEDCKHVFAEELGAGEDSFRAGLQNLMLDGSLQEVCSVLSKALYGEPMNGI
MTKDMTRLKRLLSEIEAVRSKAASELTEETDEDVQEGWQFRPPPRGVTSSEEYTLCKRFL
EQGLCRYGAQCTSAHSQEELTEWQRRYASRLIRLKQQQDGKHFTENYMEALIEKWINSLS
PERVMNDCVDGVTVEHSSGLSITVHSKKSSHAWTFTLFCKPVRTLHRVALLYDANRPHFS
ITAVSAGDASTQVPQEVSERGCQEWSSVGLVQNGMDHCVYTVVVSFSTEIFGTFRQTVVF
DFGSEPVLMQRVMVDAASIEDLEHLMQARQQLLMTAKRWDSSCKTIVEFVPNENMELERS
LLTRYQIPLSADQLFTQSVLDKTLTRDNYQSRFHDLLYIEEIAQYKEVSKFNIKVNLQLV
TSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLLLPVFKERLGQN
QPSGAKERVYEALIEEKTKDYIFLRICKDCCEELGLMADQELQVELQFQLNRLPLCEMHY
ALDRIRDNSILFPDASLTPTIPWSPNSLHPLCHRQWDEQLDPRLNAKQKEAILAITTPLS
ISLPPVLIIGPYGTGKTFTLAQAVKHILKQPETRVLICTHSNSAADLYIKDYFHPYVEAG
NPHARPLRVYFRNRWVKTVHPVVQQYCLISGAYFTFQMPTRQDVERHRVVVVTLSTSQYL
CQLDLEPGIFTHILLDEAAQAMECETIMPLALANKATRVVLAGDHMQLSPFVYSEFARER
NLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYDGKLMASGKQPPHKDFY
PLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVSPYAD
QVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQMVED
STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETFISICHENHSLH
GITFEQIKIQLEALELKKTYVLNPLAPEFIPRALRLQHPQAPGKHQHSPPKAKGQLANHT
EPFPPEGFVQPSAAVLMGNPIQAFTPPGPGAPSSGKSPSPVQRIDPAASILYVPAVYGGN
MVMPMPLPLPWPGYQSRFPMDPRIMSHPATMAAYLRPAASRTSPVLYGFNHPSPLGLNQQ
PGTDKELLQEPSGNGKMDINGKSEHCRLLTPERKAPELKEKQGDPEAVQNKSPEPQSTMG
FPASRLMRKDPQAQRALNFHMGPPHPGFPPHHGNSPFPQQYGLARPPLRMQTPMHPQAAS
FPPSFFSGPPMAHRGLQSPVLEGLEGGDVSMGPVSGAVSEDLKGVVRGLPPQSHQQPLRL
NSFGEESLDSLLGDTLDGQVSSGLDGLGPQQQQHTRVGQWGEHAPFLQPGVTPFPLPQQL
AHLSQPGLRLPQQLLRAGWGLGPAAEEDPRPVMPRYPGLLREMLPQEQYEQREPADMPPP
QSRLLQYRQVQPRSPGDLPSPSSSSNPNHFPAPPSYPDTSREPPMSGQPFQQHQAFNQAS
FSLPPEHTAAGALPVKYLLKEAHWPHPNLPQSHVLGHGLPFGLQAMAHRQEHGPLTQLQH
HQQQKQQLQAAQSSLHSVEEYEPRGPGRPLYQRRISSSSPQPYPDSQDPQDHPAPSYRYP
TADLWLGNSGPGPASAPLHNIPCNGASHLVPHREVLVSKAMSGPDEHVKPECLPQSPHPV
SAASLQHHGQFPPLMPSKQTPPDPGGGNGSPGGPQRPGNPKPPTMSYASALRAPPKPRPV
PEQVKKNSDPISLLQELSIGSSNSSNGYYTYFK
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagaaggccacagaagtcatgtgacgaggccattggatcattagtgaggcag
gagtatgaggcagcagtggctcacagcacagaggccctgctggccatgggaccccggacg
ccgacccccggcacgaccctccttcgcaagcgcgcgctgctctaccgcatagcagcacga
ctgcagttgaaggactacgaccaggcagatgaagactgcaagcatgtgtttgctgaggag
ctgggggcgggagaagacagtttcagggcggggcttcagaatctgatgctggatggaagc
ttacaggaagtgtgcagtgttctctctaaagcactttatggagaaccaatgaatggcatc
atgactaaagacatgacacgactgaagaggctgctctcagaaatagaggctgtgaggagt
aaagcggcctcagaattgactgaagagaccgatgaggatgttcaggagggctggcagttt
cgacctcctcctagaggggtcaccagtagtgaggagtacacgctgtgtaaaaggtttttg
gagcagggtttgtgtcggtacggagcacagtgtacatcggctcactcgcaagaggaactg
acggagtggcagcggcgttacgcctctcgactgatccgtctcaaacagcagcaggatggg
aaacatttcactgaaaactacatggaggcgctcattgagaaatggatcaactcgctctca
cctgagagagtgatgaacgactgcgtggatggagtgactgtggagcacagctcaggcctc
tctattaccgtccacagcaaaaaatcatctcatgcctggacattcactcttttctgcaag
ccggtccgtacgttgcaccgcgtggctttgctttacgatgccaaccgtccacacttctcc
atcacggcggtttcggccggggatgcgtcgacccaggtacctcaggaggtgtctgagaga
ggctgccaggagtggagctcagttggcctggtacagaacggcatggatcactgcgtttac
actgtggtggtgtcatttagcacagagatattcgggacgtttcggcagaccgtggtgttt
gatttcggctccgagcccgtgctcatgcagcgagtgatggtggatgccgcctctattgaa
gatctcgagcatctgatgcaagctcgacagcagcttctgatgactgctaagcgatgggac
tcgtcgtgtaaaaccattgtggagttcgtccccaatgagaacatggagctggagcgtagt
ctgctgacccgatatcagatcccgctatctgccgatcagctcttcacccagtctgtcctg
gacaaaaccctcaccagagataactatcagtcccgctttcacgacctgctctacatcgag
gaaatcgctcagtacaaagaagtcagcaagttcaacatcaaggttaacctgcagctggtg
acgagctttatgttgactggcatttccggcggagcaaagtacgctcagaacggacaacta
ttcgcacgcttcaagctgacagagactttgtctgaagacacgttagccggacgactcgtc
atgacaaaagtcaactccgtgctgctcttgcctgtttttaaagaacggctgggtcagaac
cagccgtcgggagccaaggaacgcgtgtatgaagctctgattgaagaaaagacaaaagac
tacatcttcctgcgcatctgtaaggactgctgtgaggagctggggctcatggcagatcag
gagctgcaggtggagctgcagtttcagttgaacagacttcctctgtgcgagatgcactat
gctcttgatcgcatcagagataacagcatactatttccagatgccagcctcactccaaca
ataccctggagtcccaacagtttgcatcccctatgccacaggcagtgggacgagcagctg
gatccccgtctgaacgccaaacagaaggaggctattctggccatcaccacccccctctcc
atcagcctcccgccggtgctcatcatcggaccctacggcacaggcaagaccttcacgctg
gcccaggctgtcaaacacatcctcaaacagcccgagacacgagttctgatctgtacccat
tcaaacagcgctgcggatctctacattaaagattattttcatccatacgtggaggctggc
aatccacacgcacgacctctcagggtttacttcaggaaccgctgggtaaagacggtacac
ccggtggtgcaacagtactgcctgatctccggcgcgtacttcaccttccagatgcccacg
cgacaggacgtagagcgccaccgtgtggttgtggtcacactcagcacgtcccagtacctc
tgccagcttgacctggagccagggatcttcacacacatcctgttggacgaggcagcacaa
gccatggagtgtgagaccatcatgccgctagcattggcaaataaagccactcgtgtggtg
ctggcaggagatcacatgcagctcagtccattcgtgtacagcgagtttgcgcgggagagg
aacctgcacgtctctctgctggaccgtctgtacgagcactacccctccgaatatccctgc
aggatcctgctgtgcgaaaactaccgctctcatgaggcaatcatcaactatacgtcggat
ctcttctatgacggcaaactgatggccagtggaaaacagccgccccataaagatttttat
cctctcactttcttcaccgcacgtggagaggacgtccaggagaagaacagcacggcttac
tataacaacgctgaggtttttgagatcgttgaacgtgtggaggaaatgagaaagaagtgg
ccggtggcctgggggaagctggatgaggggagcatcggggtggtttcgccctacgccgac
caggtcttccgtatccgagccgaacttcgcaaaaagaggatgcacgaggtcagcgtggag
agagtgctcaacgtccagggtaagcagtttcgcgtgctgttcctgagcaccgttcgcacc
cgtcacacctgtaaacacaagcagacggccatcaagaggaaggagcagatggtggaggac
tccactgaagacctggactacggctttctgtccaactacaagctactcaacaccgccatc
actcgagctcagtccctggtggccgtggtgggagaccccatagcgctctgctcggtggga
cgctgcagaaagttctgggagaccttcatctccatatgtcatgagaaccacagtctacac
ggcatcacttttgaacagattaagatccagctggaggccctggagctgaagaagacctat
gtgctcaacccactcgccccagagttcatccctcgcgccctccgcttgcaacatccacag
gctcctggcaaacaccagcactctccaccaaaggcgaaaggacagctggccaatcacaca
gagccctttccccctgaaggctttgttcagccgagcgctgctgttttgatggggaacccc
attcaggccttcaccccaccagggccgggagctccatcttccgggaaatctccaagtccg
gttcaaagaatcgaccctgcagccagcatcttatatgtgcctgctgtctacgggggcaat
atggtcatgcccatgcctctgcccttgccgtggcctggctatcagagtcgtttccctatg
gatcctcgcatcatgagtcatccagccaccatggcggcttacctgcgaccggcggccagt
cgaacctcacctgtgctgtatggattcaatcacccgtcacctctgggtctgaaccagcag
cccggcacggacaaggagctgctacaggagcccagcgggaatgggaaaatggacataaat
ggaaaatcggagcattgcagactgctaacgcctgagaggaaagcacctgagctgaaagaa
aaacagggagacccagaggcggtacagaacaaaagtcccgaaccccagtcgaccatgggc
ttccccgccagccgccttatgcgcaaggacccgcaggctcagagggccctcaacttccac
atggggccgccgcatcccggttttccccctcaccacggaaacagtccatttccacagcag
tacggactggccagacctcctctccgtatgcagacccccatgcacccccaggccgcctcc
ttccccccgtcgttcttcagcgggcctccgatggcacaccgaggactgcagtctccggtg
ctggagggattggagggcggcgacgtctcgatggggccggtttcgggagcggtgtctgaa
gatctgaaaggtgttgtgagaggtctgcccccacagtcgcatcagcagcccctgcgtctc
aacagctttggagaggagagtttggactctttgttgggtgatactctggatggtcaggtt
tcttcggggttggatggtctgggtccgcagcagcagcaacacactcgtgtgggtcagtgg
ggtgaacatgcccccttcctgcagcctggagtgactcccttccctctgccgcaacagttg
gctcatctcagtcagccgggtctgcgactccctcagcagcttcttcgagccggctggggt
ctgggtcccgctgcagaggaagaccccagacctgtcatgcccagatatcccggccttttg
cgtgaaatgctgcctcaggagcaatacgagcagcgcgagccagccgacatgccacctcct
caatcgcgtcttcttcagtaccgccaagtccagccccgaagccccggggacctgccgtcg
ccctcctcatccagcaatcccaaccatttcccggctccgccctcctaccccgacaccagc
cgagagccgcccatgagcggccagcccttccaacagcatcaggccttcaaccaggcgtcc
ttctctctgccacccgagcacacagcagcgggcgctcttccggtgaagtacctcctcaag
gaagctcactggcctcaccccaatctgccccagagccacgtgctgggacacggtttgccg
tttggcctgcaagcgatggctcacagacaagaacatggtcctctgacgcagctccagcac
caccagcagcagaaacagcaacttcaggcggcgcagagcagcctgcacagcgtagaagag
tatgaaccacggggtcccgggcggcccctgtaccagaggaggatctcctccagttccccc
cagccgtatccggacagtcaggatcctcaggaccaccccgcaccctcctacagatacccg
acagcagacttatggctgggcaacagcggtcctggcccggcctccgctcctctccacaac
attccatgtaacggagcgagccaccttgtcccgcaccgggaggttttagtttcaaaggca
atgagcggcccagatgaacacgtcaagcccgagtgtctcccgcagtcgcctcaccccgtt
agtgccgcgtccctccagcaccacggacagttcccacccctcatgcccagcaagcaaacc
ccgccagatccaggagggggcaacggcagcccgggaggcccccagaggcccggcaacccc
aaacccccgaccatgtcctacgccagcgccctccgagcccctccgaagccccgcccggtg
cccgagcaggtcaagaagaacagtgaccccatctctctgttacaggaacttagcataggc
agttcaaacagtagcaatggctattacacgtattttaaataa
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integrated database retrieval system
