Misgurnus anguillicaudatus (oriental weatherfish): 129428959
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Entry
129428959 CDS
T09481
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
manu04990
]
129428959 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
manu04990
]
Other domain-containing proteins
Patched domain-containing proteins
129428959 (ptchd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
129428959
NCBI-ProteinID:
XP_055041340
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All DBs
Position
18:complement(27767583..27803435)
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AA seq
912 aa
AA seq
DB search
MCFIGRDGASSAASRIWRRMLRQVIHRGLKSSFYWLGLFVSRHPVFFLTVPAVLTIIFGS
TVLSRFKPETDLEILVAPTHSLAKIERSLANSLFPVDQSKHKLYSDLHTPGRYGRLILLD
RSGGNILELAEQVLRVHKRVLDMRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIR
LAVLSNSTFAKVPVSYPNTTLKDGRVSFIGHQLGGVALSANSRDQQVKFARAIQITYYLR
NLGPVVQDIIAESWEREFCKLVHQLATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVS
LVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFF
AMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTN
IESVKVFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPT
WFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFM
GCLQISDGSNIINLLASNSPSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSTVKEHLKT
LGQGFNKISWIDNYFHYLKVVNVSASTKSDFINILKTSFLRSPEYKHFVDDIIFSKNGDE
YDIIASKMYLVARTTEKTREEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSIVSP
ILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIY
TLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNL
TYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREEIECI
EVRENPDHVTNV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagagacggggcatcatctgctgcaagccggatctggaggaggatg
ctgcggcaagtgatacacagagggttgaaatcttctttctactggctgggtttgttcgtg
agcaggcatccggttttctttctcaccgtccccgcggtgctgaccatcatcttcgggtct
acggtgctcagcaggtttaaacccgaaaccgacctggagatcctggtggccccgacgcac
agcctggcgaagatcgagcggagtctcgccaacagccttttccccgtcgatcagtccaaa
cacaagctgtactcggacctgcacacccccggcagatatggcaggctcatactgctggac
agatccgggggaaacatcctggagctcgccgagcaggtgctccgggtgcacaagagagtg
ctggatatgcgcgtcaattacaaaggcttcaattacactttcgcgcatctctgcgtcctg
agccaccgggacaagagatgcttgctggatgatatcatcaccatatttgaagacattcgg
ttggctgttctttccaatagcacttttgccaaggtccctgtgagctatcctaatacaacg
ttaaaggatggtcgagtgtccttcatcggccatcagctgggtggcgtggccttgtccgcg
aacagccgcgaccaacaggtcaaattcgcccgcgccatccagatcacctactacctccgg
aacctcggcccagtcgtgcaggacatcattgccgagagttgggaaagggaattctgtaag
ctggtgcaccagctggctacggacagccaggagctacacattcagtctctcacatccttc
agcctgtggcgggactttcacaagacgggcgtgctggccaagagcgaggttttggtcagc
ttggttctggtcctcctggctgcgaccatctctagctccatgcgggactgcctgcggggg
aagcccttcttgggtctgttgggcgtcctcaccatctgcatcgccaacgtgacggcagct
gggattttcttcatctcggatgggaagtttaactctacgctgcttgggataccctttttt
gccatgggacatggaaccaagggggtctttgaacttctggccggctggagaagaaccaga
gagagtttgcccttcaaagagagagtggcggatgcttttgccgacgtgatggtgtgttac
accatgaccagctccctctatatcatcacattcggcatgggcgccagtccgttcaccaat
atcgaatccgtgaaggtcttctgccagagcatgtgcgtagcagtcctggtgaactacttc
tatgtcttctccttctacggttcctgcttggtatttgccgggcagttggagcagaaccgc
tatcatagtgtattctgctgtaagatcccctccgtggagtacctcgaccgtcagcccacc
tggtttaaaaccatgatgagcgacggtcacgacctctccacgcaccacgacagcgtaccg
taccagaaccacttcattcagcacttcctgagggagcattacacggaatggattaccaac
acttacgtcaagccttttgtggttatcctctacctgatttatgcctctttttcttttatg
ggttgtttacagatcagcgacggatccaacattattaacctgctagctagtaactcgccc
agcgtctcgttcgcgttgacccaacaaaagtacttcagcaactacagtccagtgattggc
ttttacatctacgaacccatcgagtactggaactccaccgtgaaggagcacctgaagacg
ttaggccagggttttaataagatttcatggatcgataactactttcactatctgaaggtc
gtcaatgtcagcgcatcaaccaaaagcgattttattaacatcctcaagacttcgtttctc
cgaagccccgagtataaacactttgtggacgacatcattttctccaaaaacggagatgag
tatgacatcatcgcgtccaagatgtacctggtcgccaggacgaccgagaagaccagggag
gaggtcgtggagctgctagaaagacttcgaccactttccctcataaacagcattaagttt
atcgtcttcaacccgacctttgttttcatggaccgctacagctcctccatcgtctccccc
atcctcacgtcaggtttcagtgtgttgaccattctcatcctcacctttttcctggtcatc
aacccgctgggaaacttctggttgatcttgaccgtcacttctgtggagctgggcgtcttg
ggtctcatgacgctctggaatgtagacatggacagcatctctattctgtgccttatttat
actctcaactttgccatggatcactgtgccccccatctgtacacattcgtactggccact
gagcacacaaggactcagtgcataaaaatttcattggaggaacacggggcggccattttg
cagaacacctcgtgttttgtgatcgggataatgccccttcttttcgtgccttctaacctg
acctatacgctgttcaaatgctccctgctcacggccggatgcacagtgctgcactgtttc
gtcatcctgcccgtgtttttgacgttttttccgccctcgaaaaaacggcacaagaaaaag
aaacgagccaaaaggaaagagcgggaaagagagagggagagagaggaaatcgagtgcatc
gaagtcagggaaaaccctgaccacgtgaccaacgtttga
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