Misgurnus anguillicaudatus (oriental weatherfish): 129428969
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Entry
129428969 CDS
T09481
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129428969 (prpf39)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129428969 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
Baculo_PP31
GP24_25
Motif
Other DBs
NCBI-GeneID:
129428969
NCBI-ProteinID:
XP_055041347
LinkDB
All DBs
Position
18:36795915..36801469
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AA seq
736 aa
AA seq
DB search
MTGILDTDAPATEGAGSECATDPTAAGWTAGPVPPANQESHEYEAVQQQLYSMEHIKTEA
ENINQADPTINYPGQVMPQPPESNGQDTTQSSEPDAVKEEAGDSESPTNMELEDAPKEEG
AEEAIGAAGEQEPGLPSEYDRLWKAVEDNPEDFNGWVYLLQYVEQENHLLASRKAFDAFF
LHYPYCYGYWKKYADIEKKHGFIQMADEVYRRGLQAIPLSVDLWLHYITFLRENQDNSDG
EAENRIRASYEHAVLACGTDFRSDRLWEAYISWETEQNRLANVTAVYDRILCIPTQLYSQ
HFQKFKDHVQNNNPKHFLSEEEFVQLRVELANANRPNGDDAPGEELPPGTDDLPDPAKRV
TEIENMRHKVIETRQEIFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWREYLDFE
LENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSTEGVRHIYKKACSIHLPKKPTV
HLLWAAFEEQQGNIDEARGILKAIEEAVPGLAMVRLRRVSLERRHGNMDEVEALLRDAIT
NGRNGSESSFYAVKLARQMLKVQKNIAKAKKVLLEAVEKDETNPKLYLNLLELEYSGDVQ
QNEAEIIACFDRALGSSMSLESRVTFSQRKIEFLEDFGSDINVLVAAYEEHQRLEKESES
LKRKAENGSQESDSKRQRTDDQSAASGQMMQDMQANSAGYNYNNWYQQYNSWGAQNSWGQ
YGQYGQYNQYYPPPPT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacggggatattagacacagatgcccctgctacggaaggcgcaggaagcgaatgtgct
acagacccgaccgctgccggctggaccgcgggaccggttcctcccgcaaatcaggaaagc
cacgaatacgaggcagtacaacaacagctgtattcgatggagcatataaagactgaagca
gaaaacatcaaccaggcagatcccaccataaattaccctggacaggttatgccacagcct
ccagaatcaaacggccaggacacgacccaatcttcagagcccgatgcggtgaaagaagaa
gcgggtgactccgagagccctactaacatggagctcgaggacgctcccaaagaggaggga
gcagaagaggcgatcggtgctgccggtgaacaagaacccggacttccttctgaatatgat
agactgtggaaggctgtggaagataatcctgaagatttcaacggctgggtttatcttctg
cagtatgttgaacaagagaaccacctgttggcttcgaggaaggcgtttgatgcatttttc
ctgcactatccctactgttacggctattggaagaagtatgcagacattgagaagaaacat
ggctttatacagatggcagatgaggtatatcgacgtggccttcaggccatcccgctcagt
gtggacctgtggcttcattacatcacgttcctgagagagaaccaagacaacagtgacgga
gaagctgaaaatcgcattagagcgtcatacgagcatgcggtcctcgcctgtggtacagat
ttccgctcggatcgtctgtgggaagcctatatcagctgggagaccgagcagaacaggctg
gccaatgtcacggccgtttatgaccgaatcctctgcattcctactcagctgtactcccag
cacttccagaagttcaaagaccacgtgcagaacaataatcccaaacacttcctgtctgaa
gaagagttcgtgcagctccgggtggaactggccaacgcaaacagacccaacggagacgac
gccccgggtgaagagcttccgccgggtacggacgacctgccggatcccgcaaagagagtg
actgagatcgagaacatgagacacaaagtgatcgagactcgtcaggagatctttaaccac
aacgaacacgaagtgagcaagcgctgggcgtttgaagaagggatcaagcgtccatatttc
cacgtcaaagccctggagaagacccagctcaacaactggcgagagtaccttgactttgag
ctagaaaatggcacgccggagcgggtggtggttctgttcgagcgctgcctgatcgcctgc
gcgctgtatgaggagttttggatcaagtacgccaagtatctagagagctacagcactgaa
ggggtgagacacatctacaagaaggcctgcagcatccacctgcccaagaaacccaccgtt
catctcctttgggcggcttttgaggagcagcaaggaaacatcgatgaggcgcgtggcatt
ttgaaagcgatagaggaagctgttccgggtctggccatggtgaggttgcgcagggtgagt
ctggagcggcgtcacggcaacatggatgaagtggaagccttgttacgcgatgctattacc
aatggaaggaacggcagcgagtcgtcgttctatgctgttaaactggctcgacagatgctt
aaggtgcagaagaacattgcgaaggccaagaaggtgttgctggaggctgtggagaaagat
gagacaaatccaaagctatatctgaacctgttggagctggagtacagtggtgatgttcag
cagaacgaagctgaaatcatcgcctgctttgatcgagcgctgggcagctccatgtcactg
gagtcgcgcgtcacattctctcaacgcaaaatcgagtttctcgaggactttggcagtgat
atcaatgtgcttgtggctgcctatgaagagcatcagaggcttgaaaaggagagcgaatca
ttgaagaggaaagcagagaatggctcgcaggagtccgactcaaagagacagcggacagat
gaccaatcggcagcttcgggtcaaatgatgcaggacatgcaggctaacagtgcaggatac
aactacaacaactggtatcagcaatataattcctggggagctcagaattcttggggtcaa
tatgggcagtacgggcagtacaaccagtactatcctccaccgccaacataa
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