Misgurnus anguillicaudatus (oriental weatherfish): 129428995
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Entry
129428995 CDS
T09481
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129428995 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129428995 (arid1b)
03021 Transcription machinery [BR:
manu03021
]
129428995 (arid1b)
03036 Chromosome and associated proteins [BR:
manu03036
]
129428995 (arid1b)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Helix-turn-helix
ARID
129428995 (arid1b)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129428995 (arid1b)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129428995 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129428995
NCBI-ProteinID:
XP_073711767
LinkDB
All DBs
Position
18:5844260..5947807
Genome browser
AA seq
2158 aa
AA seq
DB search
METGLVANHQVKNVGSGDPPPSPHHRTPPQQQSQALHQQPQHQPRAVHHHNNNNNNIIIN
TITTTPARGDPANRQHGGKENALEEPKHARLLNTSDEEDRSSTVGGDRMGSKYERSNFGP
TANNNNNNSSSRSGVNASQSGNSSVSEFNHYYGNGRGGPCFDQHGGQQSPGTALMHSAQG
NMDQVQNSHEGYHNNPYNHYPNYRPGYGGAGYGMMSPSRQGNMMGPGTNSPTAAASHGKT
VLASTAPAPGSNVGGFQRYQAQNQSGATPTLNQLLTSPSPMMRGYGSGYQDYPQQQQQQS
AMDLGKDMGSPYSPAAGHSWATQQRSHPAMSPGNNGNGRAQVAPMDPMAMKRSQMYGMGN
SAYSQPGGAYPGQPYGSPTSHRYPMGMQGRGQVGMGGMQYPQQQQMPSQYGPQGMAGYCQ
QGQPPYFSPPQQQTATPSQPPYMQQRGPAQQDALQEGYGSRGQPGKPNHDDMGLTQQDRP
SSLPDLSGSIDDLPTGTEAGLSSAVSASGSTSSQGEQSNPAQSPFSPHASPRVPSLRSGP
SPSPVGSPVGSNQSRSGPISPASGPGTQMAPQTPGNVPDVGSHSAHSQSPMSQDRGFAPN
MQRNAPGPQFGAQQPGPSMSPHSCPTGPMHHSVSSYQMGSSYGPQSSQYGPSGNYPRPPN
YGGTPGANYSGPGPGMGNSLGMNASSPMHGQGPGQPCGSMTTARGPGHSAGGRPYPAGSS
NVAPTSPNMPQSAGPGMGPPPPNVSRKPHESGPPPAQQNPAPSGQARPSFARSPVYPGLC
GPGVRPASFPTPHPHYSSGQGQAHTELYGPGGYQGGSHMLGMGPGGPYNHPPSNSSSRMT
PQGPSYNTMPTGPMTGSGDAMMLTDPKQRAEHKEEGNTPNAEPPKPKDSYGSQCVSQPPT
PSPLSPSPASLSSYQGDDSDSISSPAWPKNPSSPKLSLGNVTNEKIIRLYDMGCEPERKT
WVDRYLAFMDERGTPVPNLPSVSKKPLDLCRLYFCVREIGGLAMVNKNKKWKELSTLLNV
GTSSNSASSLKKQYIQYLFAYECKVERGEEPPPDVFNTGDGKKQHAKIQPPSPANSGSFQ
GPQTPQSTGSSTMTEMPGDLKPPTPATTPHGQAAPQPSARNSGVSVQDPFSESSDPAYQK
RSTMHGGSGDASTRMQFDPSKEPYGAVRKGGSEPYMQGQMPGSGMQDMYSRGPPSGMGMG
PRPQYPYNPGFERRPDHVMGPEGGIIPSGNQNNMVPSNSDPSMFSGSRYPSHQRHGHDGY
GQQYPHSMPYSGHGMYPQQQGYKRPGEGMYGPPAKRHESEAYGMQYGGQQPEMYGQYSYP
DRRPMQGPFSYPYGRDRIHPGGQGLPQHSMMSGGPPPASNSSGGHQGNMWHARSDMNYPY
PGRQGHGAPYHSMSRADDPEARINQDGQWPVQRQSPYPPHSSSSSSSMPPMNSRQPPSSY
QSPPAMPNHISRVPSPAPFPRPVSGSMSPNKAHMMKQMQKPGGPGTGPGSQSGQGFPTIH
REVNFPLDSVEATQPQLKPRRRLTSKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLY
DDSTVSSFTLSQLPGFLELIVEYFRRCLIEIFGILEEYEVGTDGQKTLLGSCSEPTEKDQ
PSNQDPKSQSEQVDKQLDSEPEKPQTSGLASADIKEKKEETEEGKHDEEEKNVNKDPGSP
SEPRPKQASKHDKLPIKIEEREAVDDLVEDRTELLGLVGEFTSGLLHWKAGGGDSTAHIQ
TYLERRRDEEESKPLENQEIMEAHANLNTVEKEPSRVEELKSEVPGPSEETVTATVDDIL
SSAPGSLSEGETETFPFRYGEKPSGITLLEDEPRCWDEAPLSVAEGWQDELAKRCICVSN
TIRGLSFVPGNDSEMARHPGLVLILGKLVLLHHEHPKRKRMPPTYQREEERGLACSKDEW
WWDCLGALRENTLVTLANISGQLDLSIYPESICLPILNGLLHWMVCPSAEAQDPFCTANG
FSSLTPQRLVLECLCKLSIQDSNVDLLLATPPFTRQERLFASLVRHVGERKSQVCREMAV
AVLSNLAQGDPTAARAVAIQKGSVGALISFLEDSVAVAQYQQSPHTLLHMGHPTHSEPPS
INMMCRAAKALLAMAQVEENRPEFVLYESRLLDISLSSVLNSAVAAILCEVLFKLGRS
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtctggtggcgaatcaccaagtgaaaaatgttggaagcggagatccccct
ccttcgcctcatcatcgcacacctccacagcaacagtcgcaagcactccatcagcagcca
cagcaccagccgcgagccgttcaccaccacaacaacaacaacaacaacatcatcatcaac
accatcaccacgacacccgcgcgcggagatcccgcgaatcgacagcatggaggcaaagaa
aacgctttggaggagccgaagcacgcgcgtttgctgaatacaagcgacgaggaggatcgg
tcgtccacagtcgggggggatcggatgggcagcaagtacgagcgctccaacttcggaccg
acggctaacaacaataacaacaacagcagcagcaggagcggcgttaacgcgtcccaaagc
gggaacagctcggtttcagagtttaatcattattacgggaatggaagaggagggccttgc
tttgatcaacatggcggacaacaaagccctgggacggctttaatgcattcggcgcagggc
aacatggatcaagtgcaaaactcccacgaagggtaccacaacaatccgtacaaccactat
cccaactaccggccggggtacggtggggctggatacggtatgatgagcccgtcacgccag
gggaacatgatgggcccaggtaccaactcgcctaccgctgctgctagtcatggcaagact
gtcctggcctctaccgccccggctcccggttccaatgtcggcggctttcagaggtaccaa
gcacagaatcaatccggagctacacccacccttaaccagctcctgacgtccccgagcccg
atgatgcggggatacggcagcggttatcaagattacccgcagcagcagcaacaacagagc
gctatggatctagggaaagacatgggctcaccatatagccccgctgccggtcacagctgg
gcaacacaacaaaggagccacccggccatgagcccggggaataacggcaacggcagagct
caggtggcacctatggatccgatggccatgaagcgttctcagatgtacgggatgggcaac
agtgcctattcccagccaggcggagcttatccgggacagccgtacggatcacccacctct
catcgatacccaatgggaatgcaggggcgtggccaggtcggcatgggagggatgcagtat
cctcagcaacagcagatgccgtcgcagtacgggccgcagggaatggctggatactgccag
caggggcagccgccgtacttcagccctccacagcagcagactgcaaccccatctcaacct
ccatacatgcagcagcggggtccggcacaacaggatgcgctgcaggaggggtacggcagc
aggggtcagccaggaaaacctaaccacgatgacatgggtcttactcaacaggaccgtcca
tccagcttaccggatctgtctggctctatagatgacctacccacaggaacagaggcgggt
ctcagctcggctgtcagcgcttcggggtccaccagtagccagggcgagcagagtaacccc
gcccagtcaccgttttcaccccacgcctctcctagagttcccagtttgcgcagtgggcca
tcgccttcaccggtcggctcacctgtcggttctaatcaatcacgttctgggcccatatca
cctgctagcgggccaggtacacagatggcccctcagaccccaggcaatgttccagatgtg
ggctcccattcggcccacagtcagtctcccatgtctcaggacagaggatttgctcctaac
atgcagcgcaacgcacctggtccacagtttggagcccagcagccaggaccctccatgtcc
ccacactcctgtcctactggccctatgcaccacagtgtgagctcctatcaaatgggctcc
tcttatggtccccagagcagccagtatggcccttcaggtaattacccacggcctcctaac
tatggtgggacacctggtgccaactacagtggccccggcccaggtatgggcaacagtctt
ggcatgaatgccagcagtccgatgcacgggcagggtccagggcagccatgcggttccatg
accacggctcgaggaccaggacactcagctggaggtcgaccgtacccggcaggctccagc
aatgtggctccaacctctcctaacatgcctcaatctgctggcccagggatgggtccacct
ccacccaacgttagccgcaaaccgcacgagagcggccctccgcctgcccagcagaaccca
gcaccttcgggccaggccaggccttcctttgccaggtcccccgtgtaccccggcctgtgc
gggccaggggtgcgaccggcctccttccccacccctcaccctcactacagctctgggcag
gggcaggcacacactgagctgtatgggccaggcgggtatcagggtggttcccatatgctt
ggaatgggccctggaggtccctacaaccatccaccgagcaacagctcatccaggatgaca
cctcaaggaccttcatacaacaccatgcctacaggacccatgacgggctcaggagatgcc
atgatgctcaccgatcccaaacagagagctgaacacaaggaggagggcaacacacccaac
gcagagcctccaaagccaaaggacagttatggttctcagtgtgtgtctcagcctcccacc
ccatcccctctgtccccaagcccagctagtctgtcctcatatcagggggatgacagtgat
agcattagtagccctgcctggccaaagaaccccagcagtcctaaactcagcttgggaaac
gtgacgaatgagaagataatacgactgtatgacatgggttgtgaacctgagaggaagact
tgggtagaccgctaccttgccttcatggacgagaggggcacgcctgtccccaatctgccc
tcggtgagcaagaagccattggatctgtgccgactgtacttctgtgttagagagatcgga
ggcctggcaatggtaaacaagaacaaaaaatggaaagagctctccaccctcttgaacgtg
gggacgtccagcaattcagccagttctctgaagaagcagtacatccaatacctgtttgct
tacgaatgtaaggtggagcgtggagaagagcctccgcccgacgtcttcaacacaggagac
ggcaagaagcaacatgccaagatccagccgccctcacctgcaaactcaggctctttccag
ggccctcagactcctcagtcaactggcagcagcactatgacagagatgccaggggacttg
aagcctccaacaccagcaaccacaccgcacggacaagccgctcctcagccgagtgccaga
aacagtggagtgagcgtacaagaccctttctctgaaagcagtgatccagcctatcagaag
agaagcaccatgcatggaggcagtggagatgccagcactagaatgcagtttgaccccagt
aaggagccgtatggagcagtcagaaaaggtggttctgagccctatatgcaagggcagatg
ccaggcagtggcatgcaggatatgtattcacgtggacctccgtcaggaatgggtatgggc
ccgcggccccagtatccctacaaccctggcttcgaaagaaggccagaccatgtcatgggt
ccagagggtgggattattccctctggaaatcagaacaacatggtgccttccaacagtgat
cccagcatgttctcaggcagtagatatccctctcatcagagacatggacatgacggttat
gggcagcagtaccctcacagcatgccatacagtggacatgggatgtatccccaacagcag
ggttacaagcggcctggggaagggatgtacggccctcctgctaaacggcacgagagcgaa
gcctacggtatgcaatacggtggccagcagcctgaaatgtatggccagtacagctaccca
gatcgtaggcccatgcaaggcccgttctcttatccatacggacgtgatcgcattcacccc
ggtggacagggacttccccagcacagcatgatgagtggtggaccacccccagcctccaat
tccagcggtgggcaccaggggaacatgtggcatgccagatccgacatgaactacccttac
cccggccggcaaggtcacggggcaccctaccactccatgagccgtgcggatgatccggaa
gccaggatcaaccaggacggtcagtggcctgttcagcgtcagtccccgtacccgccccac
tcttcttcctcttccagttccatgcctcccatgaacagccggcaaccgccatcttcctac
caatctcctcctgctatgccaaatcacatatctcgagtaccgagccccgcgccgttccct
cggcctgtgagcggctctatgtcacccaataaagctcatatgatgaagcagatgcagaag
ccgggtggcccgggtacagggccaggatcacagagtggtcaaggctttccaacaattcat
cgagaggtcaatttcccactggactctgtggaggctacgcagccccagcttaaacctcgc
cgaaggttaacatccaaagacattggcacaccagaggcttggcgtgtgatgatgtctttg
aagtctggtttgcttgcggagagcacatgggccctagatactataaacatcctgctttat
gatgatagcacagtgtcttcctttaccctttcccagttgcccggtttcttggagctcatt
gttgagtatttcagaaggtgtctgatagagatctttgggatccttgaggaatatgaagtt
ggcaccgatggtcagaaaactcttctaggttcctgttcagagcccaccgagaaagatcaa
ccttcgaatcaagacccaaaaagtcaatctgaacaagtggacaagcaattggactcggag
cctgagaaacctcagaccagcggtttagcatcagcagacataaaggagaagaaggaggag
accgaagaaggaaagcatgacgaagaagaaaagaacgttaataaagacccgggttctcca
tcagagccgagacccaagcaagccagtaagcatgacaagttgccaattaagatagaggag
agggaggctgtggatgatctagtagaggatcgcacagagctgctaggcctagttggggag
tttaccagtggcctgctgcactggaaggctggcggaggggactccactgcccacatccag
acctatttggagagacgtagggacgaggaagaaagcaagcctttggaaaatcaagagatt
atggaggcacatgcaaatttaaacacagttgagaaggagccaagtagggttgaggaattg
aaaagtgaagttcctggaccctcggaggaaactgtgactgccactgtcgatgacatacta
agttctgctccagggtctctgtcagaaggtgaaaccgaaacgttccccttccgctacgga
gagaaaccgagtggcatcaccttactggaagatgagccccgatgctgggatgaagcccct
ctgtctgtagcagagggctggcaggatgagctggccaagcgctgcatttgcgtgtccaat
accattcgtggactttccttcgtcccgggcaacgacagcgaaatggctcggcacccaggt
ttggtgctcattcttggtaagctggtgctcttgcaccacgagcacccgaaacgaaaaagg
atgccgcccacttaccagcgcgaggaagagcgaggtctggcttgcagtaaggacgagtgg
tggtgggactgcctcggtgccttgagagagaacaccttggtcaccctagccaacatttct
ggacagctcgacctgtctatttacccagaaagtatctgccttccgatcctgaacgggttg
ctccactggatggtgtgcccttccgcagaggcccaggaccccttctgcacggcgaacggc
ttttcctccctcacgccgcagaggttggtgctggagtgtctgtgcaaactgagcatccaa
gactccaacgtagaccttctactggccacacctcctttcaccagacaggagcgcctcttc
gcctcgttggtgcggcacgtgggcgaacgaaagagtcaggtctgccgcgagatggccgta
gctgtcctctccaatctggcgcagggcgaccccactgccgcccgagccgtcgccattcag
aagggcagcgtgggggccttgataagtttcctggaggacagtgttgccgtggcacagtat
cagcagagtcctcacactctcttgcacatgggacaccccacgcactctgagccacccagc
atcaacatgatgtgtcgggccgccaaagccctgctggccatggcccaggtggaggagaac
aggcccgagtttgtgctctacgagagcaggctgctcgatatctcgctgtcctccgtgctg
aactctgccgtggcggccatcttgtgtgaggtactgtttaagctcggccgttcgtga
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integrated database retrieval system
