Misgurnus anguillicaudatus (oriental weatherfish): 129429002
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Entry
129429002 CDS
T09481
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
manu01009
]
129429002 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129429002 (sh3rf1)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129429002 (sh3rf1)
Protein phosphatases and associated proteins [BR:
manu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129429002 (sh3rf1)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129429002 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
129429002
NCBI-ProteinID:
XP_055041406
LinkDB
All DBs
Position
22:complement(24123565..24187692)
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AA seq
880 aa
AA seq
DB search
MNDHTEKDCASVKMDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGEL
RCPECRTLVESGVDELPSNILLVRLLDGIKQRPRRTGSVHSASTNGSAGVGVRGQASGGG
QRDQGPTGTPSQRAQAKTTPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDE
NWYHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTV
IRRVDENWAEGMLGDKIGIFPISYVEFNSAARQLIELDKAESGGDSSEGPSSSGPQANGS
QKVPGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSG
GLSSSAPSQVHICTAGLIVTPPPSSPVTTATVFTFPPETSYASLPVDALPPPPPPPPQSQ
SIAVGAAALNAGQRPLPALGDQSGRQRPTVYMAMFPYTPRKEDELELRKGEMFLVLERCQ
DGWFKGTSMHTGKIGVFPGNYMSPVSRTGNNQPKVPLTLCSQTGRGVTIVSPSPAPIGAG
LGNGDPSKPLPICQNPAPSCSLPAAIVTAAHIPTGQTPKVLMHVTSQMTVNQARSVVRTA
VCHSQDRPTAAVTPIQSHNSVGYHPNSAVCLQPSPVLGSSPGSSSSRMGVAMGCAASSLT
PPNVSAASLDSDVMRPVTVVALSATPGSTKSLAAGSNHSVACRLDKDCKREKKGLLKLLS
NKKKVRPSPPSSPTLEAEQTVAMEMPQGATGSEMVQPSSAVNAVGNNGRVGVESELSASS
SSSTDAASHRSNSQDNTAPIAPPPRQPCSSLLSVHHDGRPIVCERYRVVVSYPPQSEAEL
ELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccacactgagaaagattgtgctagtgtgaaaatggacgagtctgcgctcctc
gacctgttggagtgcccggtatgcttggagcggctagacgccacggcgaaagtgttaccg
tgccaacatacgttttgccgccgttgcctgcttggaattgtggggtcacgtggagaactg
cgctgcccggaatgccgcacgctggtggagagtggcgtggatgagttgccgagcaacatc
ctcctggtacggctgctggacggtatcaagcagaggccgaggaggacaggaagcgtgcac
tcggcgagtactaatggatcagctggagtgggagtccggggacaggcctcgggaggaggc
cagagagatcaaggtcccacggggacgccgtctcaaagagctcaggccaaaactactcca
gtgaggggtgtcccccagctaccctgtgccaaggcattatataactacgatggcaaagaa
cctggagacctcaagttcagcaagggtgacatcatcatcctgcgtcggcaggtggatgag
aactggtatcatggagagatgggtggagtccacggattcttccccacaaacttcgtccag
gtcatcaaaccgctgccacaaccacccccacaatgtaaagccctctacgactttgagctg
aaagataaggaggctgacaaggactgcctaccgttctcaaaggatgatatcctcaccgta
attcgtcgagtagatgaaaattgggcagaggggatgctgggagataagattggcatcttc
cccatatcttacgtagagtttaacagtgcagcgcgacagctcatagaactggacaaggca
gaaagtggaggagactccagcgaaggtccctcttcctcgggcccccaggccaatggctcc
cagaaggtccccggggaaaagaagaacagtaagaagcgacactccttcacctccttgacg
atgtcccataagccttgcctggcacctccaccccagagacactccatggagatcagcggc
ccggttttgatcagctcctctaaccccacagcggcagcccgaatcggagagctcagcgga
ggcttgtcctccagcgcaccttcacaggttcacatttgcacagcaggactcattgtaact
cctccaccaagcagtcctgtcaccacagccacagttttcacatttcctcctgagaccagc
tatgcctctctacctgtggatgctcttcctcctccaccaccccctcctcctcagtcacag
tccatagctgtgggtgcagccgcattgaatgctggacagagaccattgcccgctttaggt
gaccagagtggacgtcaaagacctacagtttatatggccatgtttccgtatacgccccgt
aaggaagacgagttagaattgaggaagggtgagatgtttctggtgctggaacgctgtcag
gacggctggtttaaaggaacatccatgcacaccggcaagattggagtgtttcctggaaac
tacatgagtcctgtcagcaggaccggtaacaatcagccaaaagttcctctgactctgtgc
tctcagactgggcgtggtgtcacgattgttagcccctcccctgctcccattggggctggc
ctagggaatggggaccccagcaaaccgctccccatttgccaaaatccagctccatcgtgc
tcgctgcctgctgctatagtaacagccgcacatatacccactggacagacccctaaagtg
cttatgcatgtgacatcacagatgaccgtcaatcaagcacgcagtgtcgtccgaacagct
gtgtgtcatagtcaggatcgccctactgcagcagtgacgcccatccagtctcataactct
gtgggctaccatcccaactcagctgtgtgtctccagccatcacctgtcctcggctccagc
cccggatcttcatctagcagaatgggcgtggctatgggctgcgcggcctcctccctgacc
ccgcccaatgttagtgctgcttctctagacagtgatgtcatgagacccgtcactgtggtg
gcactttctgcgacccccggaagcacaaagtctcttgctgcaggctcaaatcatagtgtt
gcttgtagactggataaagactgcaagcgggagaaaaaaggcttgctgaaactgttgtct
aataaaaagaaagtccgcccatctcctccatcttctcctacactggaggcggagcagact
gttgccatggagatgcctcagggtgctactggatcagaaatggttcagcctagttcagcg
gtcaatgcagtcggaaacaatggtcgtgttggagttgaatctgaactttctgcatcttca
tcatccagcacagatgcagcatcacatagaagcaactcacaggacaacactgccccaatt
gccccaccgccacgacaaccgtgctcttcactcctttcagtgcatcatgacgggcgacca
atcgtgtgtgaacggtaccgtgtggtggtgtcctaccctccccaaagtgaagcagagctg
gaactgaaagagggagatattgtatttgtgcacagaaagcgagaggacggctggtttaaa
ggaacattacagaggaacgggagaaccggcctgtttcccggcagctttgttgacagcatc
taa
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