Misgurnus anguillicaudatus (oriental weatherfish): 129429509
Help
Entry
129429509 CDS
T09481
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129429509 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129429509 (cpsf2)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129429509 (cpsf2)
U7-dependent histone pre-mRNA processing factors
129429509 (cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
129429509
NCBI-ProteinID:
XP_055042237
LinkDB
All DBs
Position
18:37500916..37513234
Genome browser
AA seq
787 aa
AA seq
DB search
MTSIIKLTALSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLKRYVHQVDAVLL
SHPDHLHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNTEDFGLFTLDDVD
SAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLETISRPSLLITDSFNASYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLSRVPSPKVVLCSQPDLESGFSRELFIQWCQDPKNSVILTYRTT
PGTLARYLIDNPGEKRIDLEIRKRCRLEGRELEEYLEKEKLKKEAAKKLEQAKEVELDSS
DESDMEDDLEQPAVVKTKHHDLMMKGEGGRKGSFFKQAKKSYPMFPTHEERIKWDEYGEI
IRPEEFLVPELQATEEEKSKLESGLTNGDEPMEQDLSDVPTKCTSITQTFDIRARVTYID
YEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLADSCKAFSGKDIKVYTPKLHETVDG
TSETHIYQVRLKDSLVSSLQFCKAKDTELAWIDGVLDMRVEKVDTGVIAEVGDVKDEGED
GDQAMDVSADLMTEPSSAANQRAMKTLFGEDEREISEESDVIPTLEPLPAHEVPGHQSVF
INEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRICLEGCHCDDYYRIRQLL
YQQYAVI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatcatcaaactgacggctctgtccggtgtccaggaggaatcggctctgtgt
tacctgttacaggtggatgagtttcgtttcctgctggactgcggctgggatgaaaacttt
tccatggacatcattgattccctaaagaggtatgtacatcaggtggatgcagtgttgctc
tctcatcctgatcatcttcacctgggagctttgccgtacgctgtgggcaaactgggactt
aactgcaccatctatgccaccatcccggtctacaagatgggccagatgttcatgtacgat
ctttatcagtcccgacacaacacagaagattttggtctcttcacgctggatgatgtggat
tcagcatttgacaaaatccagcagttaaaatactcacagatcgtcaacttgaaaggaaaa
ggtcacggtctgtccatcacccctctgcccgccggtcacatgatcggtggaacgatttgg
aaaatcgttaaagatggagaggaagagattgtgtatgccgtggatttcaatcacaagagg
gagattcatctgaacggctgttccctggagaccatcagcagaccgtctctcctcatcacc
gactccttcaatgcttcatacgtgcaacctcgcaggaaacagcgtgatgagcaactgctc
accaatgtcatggagaccctccgcggtgatgggaatgtgttgatcgctgtggacaccgcg
gggagagtactggagctcgcacagcttctggatcagatctggaggaccaaagacgcaggc
ctgggtgtctactctctcgccctgctcaataatgtcagctacaatgtggtggagttctca
aagtcccaggtggagtggatgagcgataaactcatgcgatgtttcgaggacaaacgcaac
aaccccttccagtttcggcacctgtccctctgccacggtctgtcagatctgtcccgtgtg
ccgagtcccaaggtggttctgtgcagccagcccgacctggagtccggtttctcacgagag
ctctttattcagtggtgccaggaccctaaaaactctgtgatcctcacgtatcggaccaca
ccgggaacgctggcccgatacctcatcgataacccaggggagaagaggatcgacctggag
ataagaaaacgctgcagattggagggcagagaactggaggaatacttggagaaagaaaag
ttgaaaaaagaagctgctaagaaattggagcaggcgaaagaggtggagttggactcgagt
gatgagagcgatatggaagatgatctggagcagccagctgtggtgaagaccaaacatcat
gacctgatgatgaagggcgagggaggaaggaagggcagcttcttcaaacaggccaagaaa
tcttaccctatgtttcccactcatgaggagaggattaaatgggacgagtatggagaaatc
atcaggccggaggagtttctggttcctgaacttcaagccactgaagaggagaaaagtaaa
ctggagtctggattgactaatggagatgagccgatggagcaggacctgtctgatgttccc
actaaatgtaccagtatcacacaaacatttgatatcagagcacgagttacatacatcgat
tatgagggtcgttctgatggtgactctattaagaagattataaaccagatgaagcccaga
cagctgatcattgttcatggtccacctgaagccagtcaggatctggctgactcctgtaag
gcgttcagtggaaaagacatcaaagtttatactcctaaacttcacgagactgtggacggc
accagtgaaacacacatttatcaggtgagactgaaggattcattggtcagttctcttcag
ttctgtaaagccaaagacacggagctggcctggatcgatggcgtcctggacatgcgtgtg
gagaaagtggatacaggagtcatcgcagaggttggagatgtgaaggatgaaggggaggat
ggagatcaggccatggatgtctcagcggacctgatgactgaacccagcagcgcagctaac
cagcgggccatgaagactttgtttggagaggatgagcgagagatctcggaggagagtgat
gtcataccaactctcgaacccctgcctgctcatgaagtaccaggtcatcagtctgtgttc
atcaatgaaccgagactatcggactttaaacaggttcttctgcgtgaagggatccaggcg
gagtttgtcggtggagtgttggtgtgtaataatctagtggctgtgaggagaacggaggct
ggtcgtatctgtctggagggttgtcactgtgatgattactataggattcgtcagctgttg
tatcagcagtatgctgttatttag
DBGET
integrated database retrieval system
