Misgurnus anguillicaudatus (oriental weatherfish): 129429528
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Entry
129429528 CDS
T09481
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129429528 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129429528 (cdc40)
Spliceosome [BR:
manu03041
]
Complex C
Other components
Step II factors
129429528 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
129429528
NCBI-ProteinID:
XP_073712571
LinkDB
All DBs
Position
18:38852989..38871197
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AA seq
579 aa
AA seq
DB search
MAATAGSLVSYGSDSDSENESESGTEPQKVDPDAIAHLQPLKSSSITTLAVLNSAPEVAV
KEDVETGVHLDPELKEVTYNPKYETMFAPEFGPVNPFRTQQMAAPRNMLSGFAEPAHVND
FMFEQQRRTFSTFGYALDPSVDSSSQISSNTYIGATEEAEKNKGLTVFESGAKKSEKRKK
VKGGEAAEIESFLGPWAKYQDEKDVAKPSEEEQKELDEITAKRQKRGKNEEEAPAEEKTI
LHIKDAYDYQGRSYLHIPQDVGVNLRSPDIPDKCYLPKKQLHVWTGHTKGVSAIRLFPAS
GHLLLSCSMDCKIKLWEVYNDRRCVRTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWD
TETGKCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTEEVVQEYDRHLGA
VNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTT
KLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcgggttccctcgtttcttacggcagcgactcagattcggaaaatgag
tccgaatctggtaccgaaccgcagaaagtggatccagatgcgattgcgcatcttcagcct
ttaaaatccagcagcatcacaactttagccgtcctgaattcagcgcctgaagtagctgtg
aaggaagatgttgagacaggagtgcatcttgatccagagctcaaagaagtcacttacaat
cctaaatatgaaaccatgtttgctccagagtttggaccagtcaacccattcaggacccag
cagatggctgcgccgcgaaacatgctgtctggtttcgctgaaccggcccacgtcaatgac
ttcatgtttgaacagcagaggagaacgttttctacattcggttatgctttggatccgtcc
gtggacagcagcagtcagatctcatccaacacttacattggagcgacagaagaggctgag
aaaaataaagggctgactgtttttgagtctggagcaaaaaaatctgaaaagaggaagaag
gtgaaagggggagaggctgccgagattgaaagctttctgggaccctgggccaaataccag
gatgagaaagatgtggccaaaccgtccgaggaggagcagaaggagctggatgagatcaca
gcgaagcgacagaagagagggaaaaatgaggaggaggctccagccgaagagaagaccatc
ctgcacattaaagatgcatatgactatcaaggtcgctcgtatctgcacattcctcaggat
gtgggggtcaacctgcgctcgccagatattccagacaaatgctacttacccaagaaacag
ctgcacgtttggaccggacacaccaagggtgtcagtgccattcgtttgtttcctgcctcc
ggtcatctgctgctgtcctgctccatggactgtaaaatcaagttgtgggaggtttataat
gacagaagatgtgtgcggacgtttatcggtcacagtaaagccgtgcgagatgtgtgtttc
aataacaccggcacacagttcctcagcgctgcctacgacagatatctcaaactctgggat
acagagacgggtaagtgcatctcgcgcttcacaaacagaaaagttccctactgcgtgaag
tttaacccagatgaggacaaacaaaacctgttcgtcgccgggatgtccgacaaaaagatt
gtgcagtgggacattcgcacagaggaagttgttcaggaatatgaccgacatctgggcgca
gtaaacacaatcacctttgtggatgaaaaccgtcggtttgtcagtacgtctgatgataaa
agtctgcgtgtgtgggaatgggatattcctgtggacttcaaatacatcgctgagcccagt
atgcattcaatgccggctgtaacactgtcacctaatggtaaatggttggcttgtcagtcg
atggataatcaaatcctgatatttggagctcagaacagattccgtcttaacaagaaaaag
gtcttcaaaggtcacatggtggctggatatgcctgtcaggtggacttctctcctgacatg
agttatgttgtatctggtgatgcagatgggaagctgaatatttgggattggaaaaccacc
aagttgtaccatcggatcaaagctcatgataaagtttgcatcagtgcgctttggcatccc
cacgagacctcgaaggtcatcacatgcggttgggacggtcagatcaaactctgggactaa
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