Misgurnus anguillicaudatus (oriental weatherfish): 129429868
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Entry
129429868 CDS
T09481
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129429868 (ddx1)
03016 Transfer RNA biogenesis [BR:
manu03016
]
129429868 (ddx1)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129429868 (ddx1)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129429868 (ddx1)
Transfer RNA biogenesis [BR:
manu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129429868 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
DUF7647
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
129429868
NCBI-ProteinID:
XP_073712251
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All DBs
Position
18:24880225..24890946
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AA seq
740 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEELDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRSAVKTGGAVFNKWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKAVTKGKYYYEVTCHDQGLCRVGWSTGQASLDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDLDKNHLSFSKNGNDLGLAFEIPPQLKNQPFFPSCVLKNAELKF
NFGEEPFKNQPKDGFVALSQASDGHVVKSTQTGSAKVSEVKSSSHSPKALIIEPSKELAE
QTLNNVSQFKKYVENPKLRELLIIGGVAAKEQLSILESGVDIVVGTPGRLDDLISTKKLD
LSQVRFLVLDECDGLLTSGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKLDRLWEKLGKNHVRTDEVHASDSTHPGAN
TPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIKQGGGSDKKGHQF
SCVCLHGDRKPDERKRNLDRFKKKEVKLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVAMEKEKVWYHVCPNRGKGCYNTKLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGLYKGHVDILAPTVRELANLER
EAQTSFLHLSYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttcggcgaaatgggagtgatgccagaaatcgcgcaggcagtggaagaattg
gactggctgctgccgacagacattcaggccgaatccattccactgattctgggtggagga
gacgtgcttatggcagctgagacagggagtggaaaaactggagcctttagtattccagtc
atccaaatagtctacgagacccttaaagaccaacaggaggggaagaagggacgcagtgcc
gtgaagacaggaggagcagttttcaataaatggcagatgaacccttatgacagaagtcca
gcatttgctatcggtccagatggtctctgttgtcagagcagagaattcaaagagtggcat
ggatgtcgttccaccaaagcggtcacaaaaggcaagtattattacgaggtgacctgtcac
gatcaagggttgtgcagggtgggctggtccactggccaagcatcactggacttggggacg
gacaaatatggatttggctttggaggaactgggaagaagtctcacaataagcagtttgat
agttatggagaggagtttactatgcatgataccatcggctgctacatagatctggacaaa
aatcatttgtcattctcaaaaaatggtaatgatctaggtttggcatttgaaatccctccg
cagctgaaaaaccagcccttctttccttcctgcgtgttaaagaacgccgaactgaaattc
aactttggtgaagaacctttcaaaaaccaacccaaagacggctttgtggccctgagccag
gcttcagatggtcatgtggtcaaatccacccagacaggcagtgctaaagttagtgaggtc
aaatccagttctcactcccccaaagctctgatcattgaaccgtctaaagagctggctgaa
caaacccttaacaatgtcagccagttcaagaaatatgttgaaaaccccaaactaagggag
cttctcatcatcggaggtgtggctgctaaagaacaactctctattttagaaagtggggtt
gatatagtagttgggaccccaggtagactggatgatctcatatccacgaaaaagttggat
ttatcccaagttcggttcctggtcctagatgagtgtgatggacttctcacatctgggtac
actgacttcatcatgagggtctacaaccagatcccccaggtcacctcagatggcaagaga
ctacaggtgatagtttgctctgccacgctgcactcgtttgaggtaaagaagctctccgag
aagatcatgcactttcccacatgggtggatctgaaaggagaggattctgtaccggaaacc
gtccatcacgtggtggtgccagtcaaccccaaattggacaggctgtgggagaaactgggc
aagaaccacgtcaggactgatgaagttcatgccagtgatagcacacaccctggagccaac
accccagagatgtggtcagaggccatcaagattctgaagggagagtatgccgtgagagcc
attaaagagcataagatggatcaggccatcatcttctgcaggacaaagatcgactgtgac
aatatggagcagtactttatcaaacaaggaggaggttcagacaagaaaggacaccagttc
tcttgtgtttgtcttcatggtgacaggaaaccagatgagcgcaaaagaaacttggatcgg
ttcaagaaaaaggaagtgaagcttctgatttgtacagatgttgctgctagaggaatcgat
atccatggtgttccttacgtgataaatgtgactctaccagatgagaagcaaaattacgtt
catcgtattggaagagtaggccgagcagacaggatgggtctggctatatccctggttgct
atggagaaagaaaaggtgtggtaccacgtttgtcccaacagaggaaagggttgctataac
accaaactcaaagagaacggaggttgcactatctggtacaatgagaaggagctgttgtct
gaaatcgaggaacatctgaaatgcaccattactcaatgtgaacctgacatcaaagtacct
gtggatgaattcgatggcaaagtgacttacgggcagcgcagggctactggaggtggtctc
tataagggccatgtggatatattggccccaactgtaagagaattggccaacctggagaga
gaggcacaaacatctttccttcatctcagttatctacccaaccagctcttcaaagcattt
taa
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