Misgurnus anguillicaudatus (oriental weatherfish): 129430535
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Entry
129430535 CDS
T09481
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129430535 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129430535 (hbs1l)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129430535 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
129430535
NCBI-ProteinID:
XP_055043801
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All DBs
Position
13:complement(23166421..23192388)
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AA seq
607 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDVYGQSLEDDYCISPATAAQFIYSRQDSRHARQVEPLEEAE
DEEEEEMPTSPTITHTLDPLEQGRLYSCLDQMRAVLGDSFPDATLTQAALKYDYDPQRAL
DFILTEEKTNTNTLPTRTNQQPEPVTIPAPQKGALLPSLHNRTNTVKNTQTTCKPLIPDR
AQSYSLKDLLAQSETNKTITAAQTFPPSLGSLLNGGLKAVSSQNLGKSNEGQSSALGQSS
LAQLIAEHGQKSANVPPLVPSNGLTLDYTFPLTSSLTQGPKVPFGLCPNPTVPLSAALSH
GPSAPLNSMISLGSGATFSTGPSLETLTSIPSSLSITSTPSLLTCSLNSLTLQDPRGSTP
LSVSLGSLSSVLQNSGPLGIPGPDKNRGVGGQGSPSLADLIQEHQGSSPELYDCMPGPQN
AFDSRTNISHPTKAPPGFLGAPSLFDLISQSQGLQLPASSASREIGNDKGRLYDKSTMTV
PKPRPLSLNPNVDLSTLMSQTSPDVSPGCQEKRLPVFLSLHISASQKKGVFAEPSVFALA
MCVRGRRRKSLRSKAARHNAFLYSKQMETVKERVQCAPLHHITPFNFDTPSPDDIVKANQ
RKAFTRE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacaggaatgtacgagggtataactacgacgaagattttgatgacgatgac
gtgtacggacagtccttggaagatgactactgcatttcacctgccactgctgctcagttt
atctattcgcggcaagactcaaggcatgcacgacaagtggaaccactagaggaggcagaa
gatgaggaagaggaggagatgccaacctcacccacaatcacacacacacttgaccctctc
gagcaaggtcggttgtattcctgtttggatcaaatgagagcagtgctgggagactcgttt
ccagatgccacgctgacccaagcagctctgaagtacgattatgatcctcaaagagccctt
gactttattctgactgaagagaaaaccaatacaaacacccttccaaccagaaccaaccaa
cagccagagcctgttacgattcctgcaccgcaaaaaggagccttattaccttctttacac
aataggacaaatactgtaaaaaatacacaaacaacatgcaaaccactgataccggaccgt
gcgcagtcctatagccttaaagatttgttagcccagtctgagacaaacaaaaccataacc
gctgctcaaacatttccccctagtctggggagcttgctaaacggtggtttaaaagcagtt
tcaagtcaaaatttgggaaagtcaaatgagggacaatctagtgctttaggacaaagttca
ctggcccagctaatagctgagcatggacagaaaagtgctaatgtgcccccgcttgtcccc
tccaatggtctcacgttggactacacttttcctctcacttccagtcttacccaaggccct
aaagttccttttggtttatgtccaaatccaaccgtcccactatctgctgctctgtctcat
ggtcctagtgccccactaaactccatgatctctcttggttctggtgcaactttttctact
ggtccgtctttggaaaccttaacttctataccgtctagtctcagtataacatccacccca
tctctactcacttgctcactaaatagtctgacgctgcaggaccctcgggggtccactcct
ctttctgtctctttaggaagtttgagctctgtcctgcaaaacagtgggccattgggaata
cctgggcctgataaaaaccgtggggttggaggtcagggaagtccgtcattagctgatctt
attcaagagcatcagggcagtagtcctgaactctatgactgcatgccaggaccccaaaat
gcatttgattcgcgtacaaacatttcacaccctacaaaagctcctcctggctttttaggg
gcaccatccctatttgacctcatatcccaaagccaaggactccagcttccagcatcctcg
gcgtctcgcgaaattggaaatgacaaagggaggctatacgacaaatctacgatgactgtg
cctaagccccgcccactaagtttaaatccgaatgttgatcttagcacgctcatgtcccaa
acatctcccgacgtttctccaggttgccaagaaaagcgcttgccagtctttttaagttta
cacatctccgctagtcagaaaaaaggtgtatttgcagaaccgtccgtttttgcgttggca
atgtgcgtgcgtggaagaagacggaagagcttgcgaagtaaagcagcaagacataacgct
ttcctatatagcaagcagatggaaaccgttaaagaacgagtgcagtgtgcacctctccat
cacatcactccttttaacttcgacacgccctctccggatgacattgttaaggcgaatcaa
agaaaagcttttacccgggaatga
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