Misgurnus anguillicaudatus (oriental weatherfish): 129431009
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Entry
129431009 CDS
T09481
Symbol
slc6a1a
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1a
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129431009 (slc6a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manu02000
]
129431009 (slc6a1a)
Transporters [BR:
manu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129431009 (slc6a1a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Presenilin
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
129431009
NCBI-ProteinID:
XP_055044663
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Position
13:complement(5315885..5341031)
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AA seq
676 aa
AA seq
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MATNNSKTADGQVVTELNEITTNDKPKAEDAKPEKKKDIPERENWAGKFDFLLSCVGYAI
GLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLECALGQYTSIGGLGVWKLAPMF
KGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTDLPWKTCNNPWNTERCYTNYSIVDT
TNLTSAVMEFWERNVHQMTDGLEKPGQIRAPLAITLAIAWVLVYFCIWKGVRWTGKVVYF
SATYPYFMLFILFIRGVTLPGAREGILFYVTPDFEKLKESEVWLDAATQIFFSYGLGLGS
LIALGSYNPFHNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMAHVTKRSIADVAASGPG
LAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRVLRKRREI
FIACVCVVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNKFYD
NIQEMIGYRPCLWWKLCWVFFTPLVVAGVFLFSAVQMVPLTMNNYVFPKWGQGVGWLMAL
SSMVLIPGYMGYMFLNMKGTYKERIRIMLHPAAVQRTQENGPDQQQLQAQQPEESTQEPH
SPQQPKSPQQPQSPQQPQSPQQPQSPQSPQQPQSMQQVDQTQPKSPQQPEQPQQQSQSQV
SAENVSSAKPGNDANV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaacaacagcaaaaccgctgacggacaagttgttacggaactcaacgagatc
acaactaacgacaaacccaaagcagaggacgccaaaccagagaagaagaaagacattccg
gagagagaaaattgggctgggaaatttgattttctgctctcatgtgtgggctacgccatc
ggactgggtaacgtctggagatttccgtatctctgcgggaaaaacggcggcggtgctttc
ttaatcccatattttttgacgctcatttttgcgggagttccgctgttttttcttgaatgc
gctcttggacagtacacatccattggcggccttggggtttggaaactggctccaatgttt
aaaggtgtcgggcttgcagctgctgttctgtcgttctggctgaatatttactacatcgtc
attattgcctgggccctgtactacctatacaactcttttaccaccgaccttccatggaaa
acttgtaacaatccatggaacacagaaagatgttacaccaactacagcattgtagacact
actaatctcaccagtgctgtcatggagttttgggaacgcaacgtgcatcaaatgaccgac
ggcttagaaaaacccggccagattcgtgcgccgctcgctataacgcttgccatcgcatgg
gtcctggtctacttttgtatctggaaaggagtgagatggactggaaaggtggtgtacttc
tccgccacctacccatacttcatgctgttcattctgttcatccgtggcgtgaccctgccc
ggggctcgggagggaatcctattctatgtcactccggattttgagaagctgaaagagtct
gaggtttggctggatgcggcaacacagattttcttctcgtacggtttgggtctgggctcc
ctcatcgctctcggcagctacaaccctttccataacaacgtgtacagggactctatcatc
gtctgctgcattaattccttcactagcatgtttgctggatttgtgattttctctatcgtt
ggtttcatggcacacgtgacaaagagatctatagcagatgtagctgcgtcaggtcctggt
ttggcattcttagcctatccagaagctgtgacacagttacccatctcaccgctgtgggct
attcttttcttctccatgcttctcatgttgggaatcgacagtcagttctgcacggtggag
ggcttcattacggcactggtggatgagttcccacgtgtgctcagaaagaggagagagatc
tttatcgcgtgtgtgtgcgttgtgtcctacgccatcgggctgtcaaatatcacccagggc
ggtctctatgtgttcaagctcttcgattattactcggccagtggtatgtgtctgctcttc
ctggtcttctttgagtgcatatcaatctcttggtgttacggtgtgaataagttctatgat
aacattcaggagatgataggatacagaccgtgcctttggtggaaactctgctgggttttc
tttacccctctggtcgttgctggtgttttcctcttcagtgccgtacaaatggttcctctt
accatgaacaactacgtgttccctaaatggggtcagggagtcggttggctcatggctctg
tcctctatggttcttatacccggctatatgggctacatgttcctcaacatgaagggcaca
tataaggagcgcatcaggataatgctgcatcctgcagcggttcagcgaacgcaggagaat
ggaccggatcaacagcagctgcaggcacagcaacctgaagagtcaacgcaggaaccgcat
tcaccacagcaaccgaaatcaccgcaacaaccgcaatcaccacagcaaccgcaatcaccg
cagcaaccccaatcaccacagtccccgcagcaacctcagtcaatgcagcaagtggaccag
acgcaaccaaaatctccccagcaaccagaacaaccacagcagcaatctcagtcgcaggtg
tcagctgaaaatgtttcttcagctaaacctggcaatgatgccaatgtctaa
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