Misgurnus anguillicaudatus (oriental weatherfish): 129431485
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Entry
129431485 CDS
T09481
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM58-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129431485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129431485
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129431485
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129431485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
Prok-RING_4
zf-rbx1
zf_RING_Vps8
U-box
zf-Nse
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129431485
NCBI-ProteinID:
XP_055045382
LinkDB
All DBs
Position
13:complement(4680632..4682915)
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AA seq
544 aa
AA seq
DB search
MSLSKPEERLTLELSCPICLQLYRDPVALPCGHNYCLGCIQNAANAEDPKNSSRCPECRE
EYGSPKALPRNFKLSGIVDGYLVATSSGGLKGGPSKPCDQCLDDFVAAVKFCTRCEMSLC
SGHLQRHEERHSSKGHILVELNAERDGKRCPVHGKTTEYMCAQERLFLCSDCVIEGTHQN
HDVKTFEVAKGEMKRVLEGLGKAVFNKLQMTEVLLKNASERDGPADNAEGKLVTRANMLL
DNMSTLISAYKSRMSTLMDDELRLRDKSWQANRNDLESCQRQLKEAHQTTTEVLSESSEF
LFIQQYLSIEARVRQAANATIPCLPTQEPSDAKNLRSALRTDTFRADMSLLLDSLHSLMN
PLDLTFNPATAHAGLLLSTDLKTVKQCAGMRSGSGKDQSERFSTVSQVMCSQGFSAGVHM
WTVEIGPGCTWSVGLCYKSIPRKGDHSKLGHNAASWRLQWKNKKLTASHDSANVAICDGL
IVPPKRVEVTLDYEAGIVAFHSTGHGGRKQHLYTFSGGFRDVVYPAFGIHSTSEDSWITL
LSGV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaagtaaacccgaagagcgtctgactttagagttgagctgcccgatctgtctg
cagctttaccgtgaccccgtggctcttccttgcggacacaattactgtctgggatgtata
caaaatgcagccaatgcagaagatcctaagaactcgagtcgttgtccggaatgcagggag
gagtacggtagcccaaaggctctgccgaggaacttcaaactcagcggcatcgtggacggt
tacctggtggccacatcgagtggcggtctgaaaggaggcccttcgaagccgtgcgaccag
tgtttggacgattttgtggccgcagtgaagttttgcacacgttgtgagatgtcgctttgc
tccggccaccttcagcggcacgaggagcgacacagttccaaagggcacattttagtggag
ctgaacgccgagcgggatgggaagagatgcccggtgcacgggaagaccacggaatacatg
tgcgcgcaagagcggctgttcctctgctcagactgtgtgatagaggggacccatcagaac
catgatgtcaagacgtttgaagtggcgaagggggagatgaagagggtcctggaagggctg
ggaaaggccgtgtttaacaagctacaaatgactgaagttctgctgaaaaatgccagcgaa
agagacggacccgctgacaacgcagaaggcaaactggtgaccagagcaaacatgctcctg
gataacatgagtacactgataagtgcatacaagagtcgcatgagcactttgatggacgat
gagcttcgtttgcgcgacaaaagctggcaggccaatcgaaacgatttggagagctgtcag
cggcagctgaaggaagctcaccaaaccaccaccgaggttctctctgaatcctccgagttc
ctcttcatccaacagtacctcagcatcgaggcgagggtccgtcaggctgccaacgccacc
atcccctgcctacccacccaagagccttccgatgccaaaaacctgcgctccgccctgcgc
acagacacctttcgtgctgacatgagcctcctgctggactctctccacagcttgatgaac
cctctagacctgaccttcaacccggccacagcccacgctggccttctgctctccaccgat
ctcaaaactgtaaagcagtgcgccggaatgaggagcggcagcggcaaggaccagagcgaa
cgcttctccacggtctctcaggtcatgtgctctcagggtttctctgccggagttcacatg
tggacggtggagatcggccccgggtgcacgtggtccgtgggtctgtgctacaaaagcatc
ccgcggaaaggtgaccacagcaagctgggccataacgccgcttcctggaggctgcagtgg
aagaacaagaagcttacggcaagccacgactcggctaacgtggccatatgcgacgggcta
atcgtgccaccgaagcgggtcgaggtgaccctggattacgaagcaggaatcgtcgccttt
cacagcacgggtcacggtggacgaaagcaacatctttacacgttcagtgggggtttcagg
gatgtagtctaccctgcatttggcattcactcgacgtcagaggattcttggataacactg
ctgagtggagtttga
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