Misgurnus anguillicaudatus (oriental weatherfish): 129432635
Help
Entry
129432635 CDS
T09481
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04120
Ubiquitin mediated proteolysis
manu04137
Mitophagy - animal
manu04144
Endocytosis
manu04340
Hedgehog signaling pathway
manu04350
TGF-beta signaling pathway
manu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129432635 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129432635 (smurf1)
04350 TGF-beta signaling pathway
129432635 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129432635 (smurf1)
04137 Mitophagy - animal
129432635 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
129432635 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129432635 (smurf1)
04121 Ubiquitin system [BR:
manu04121
]
129432635 (smurf1)
03029 Mitochondrial biogenesis [BR:
manu03029
]
129432635 (smurf1)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129432635 (smurf1)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129432635 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
129432635 (smurf1)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
HECT type E3
129432635 (smurf1)
Mitochondrial biogenesis [BR:
manu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129432635 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
129432635
NCBI-ProteinID:
XP_073713167
LinkDB
All DBs
Position
19:19749215..19791863
Genome browser
AA seq
727 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDTVRGQIVGILQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQERLQAQRIRSQDSRGHAHTPQNRPHGHQSPDLPEGYEQ
RTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDHN
NRTTQFTDPRLHHIMSQHTQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYIN
GGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFLQ
HELKPNGKNISVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNKE
LELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTRV
PLQGFKALQGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE
TCGFAVE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctggcactcgaaggaacgggtcaagcatcaaaattcgactgacagtatta
tgtgccaagaacctggcaaagaaagacttcttccggttgcctgatccttttgcaaaagtg
gtggtggacggctcgggtcaatgccactctacagacacggtcaaaagcacgttggacccc
aagtggaatcagcattatgacctgtatattgggaaaacagattccatcaccattagcgta
tggaaccataagaagatccataagaaacaaggggcgggattcttaggctgtgtgcggctc
ctctccaatgccatcagcagacttaaagacacaggctaccaacgtttagacttatgcaag
ttaaatgcatctgacagtgatacggttcgcggacaaatcgttggtattctgcagaccaga
gacagaattggtagtggagggcctgtggttgactgtagaggactggttgagaatgaaggg
cccgtctttgaggattcgggccccggacggcctctcagctgtttcatggaggagcccatg
ccctacacggatcccacaggagccgctggtgggggaaactgccgagcactcgagtcaccc
aatcaggaaagactccaagcacaacggatcagaagccaggattcacgagggcatgcgcac
acaccccagaatcgaccacatgggcaccagtcccccgaccttcctgagggctacgaacaa
aggaccaccgtgcagggccaagtctatttcttgcacacacagaccggcgtgagcacctgg
cacgatcccagaataccacgggatttaaacagcgtgagctgcgaggagctgggccctctg
ccgcctggctgggaaataaggagcactgtttcaggaagaatatattttgtcgaccacaat
aatagaaccacgcaattcaccgacccaagattgcatcacatcatgagccagcacactcag
gtgaaggagtcaagccaagctctaccggtacagatggaggttggtatggaggagggtgat
ggcgagttaccggtgcgctacgagagagatctggtccagaagctcaaagttcttcgccat
gagctctccctgcagcaaccgcaggccggacactgccgcatagaagtgtcccgcgaggag
atctttgaggagtcttatagacaaatcatgaagatgagacccaaagatctgaagaaacgt
ctgatggtgaagtttcgaggagaggaggggctggattatggtggagttgccagggagtgg
ctttatctcctctgccacgagatgttgaatccatactacggcctgtttcagtactctact
gataacatctacacactacagatcaacccagactcatccattaatcctgatcatttgtct
tacttccactttgtcgggcgaattatgggtctggctgttttccacgggcactatatcaac
ggaggcttcacattgcccttctacaaacaacttctcgggaagcccatccagctttgcgac
cttgaaactgtggatccagagctgcacaagagccttgtgtggattctggagaatgacatc
acatccgtcctagaccacacgttctgtgtagaacacaatgctttcggcaagttcctccag
catgagcttaaaccaaacggcaagaatatctcagtcacagaggagaacaagaaagaatat
gtaaggctgtatgtcaactggaggttcatgcgaggtatcgaggcacagttcctcgccctg
cagaagggcttcaacgaactcatcccacagcatctgctcaagccttttgacaacaaggaa
cttgagctcatcatcggtggtttggggaagatcgatctgaacgactggaaggccaacacg
cggctgaaacactgtgtggccgacagtaacattgtgaagtggttctggcaggcagttgaa
tcttttgatgaggagagaagaggcagactgctgcagttcgtcaccggatccacacgtgtc
ccgctacaaggattcaaagcgctgcaaggttctgccggaccaagactcttcactattcat
ttaatcgatgccaacactgataacctgcccaaagcccacacgtgcttcaaccggattgac
atcccgccttacgagtcatatgagaagctctatgagaagctcctgaccgccgtggaggaa
acatgtggcttcgcagtggagtga
DBGET
integrated database retrieval system
