Misgurnus anguillicaudatus (oriental weatherfish): 129433120
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Entry
129433120 CDS
T09481
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129433120 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129433120 (cnot2)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129433120 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129433120 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
129433120
NCBI-ProteinID:
XP_055047574
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All DBs
Position
25:10239693..10249307
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AA seq
519 aa
AA seq
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MFSATRKKFVEGVDSDYPDDPSMYYPPMFRPEKDMLTSPSPSSSGQLSQLGASLYGPQNT
LGFSIRGMSNNNPQLNRNLTQSTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNTRNMMS
SQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQSARQPFTINSMSGFGMGRSQGF
GMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLSGRAPYVGMVT
KPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSLNSSGKGSSSTDGPKFPGDKTS
SAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLT
TLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDL
LFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFD
CHNWRKVAKVKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcaactagaaagaagtttgttgagggggtcgacagtgactacccagatgac
cccagcatgtattatcccccgatgtttcgaccggagaaagacatgctgacatctccttca
ccgtcatcgtcaggtcaattgtcacagcttggtgcaagtttgtatggacctcaaaataca
ctaggtttctcaataaggggcatgagtaataacaatcctcaactgaaccggaacttaaca
caaagcactcagctaccgagccatagcaccccaacaacaggcgtcccaacaatgtccctc
cacacgccaccttcgccgaacaggggcatcctgcccatgaacaccagaaacatgatgagc
tcgcaggtagggcagggcatgggcatgagcggcaggaccaacagtatgggcagctcgggc
ctgggcagccctaaccgcagctcgccaagcattatctgtatgcccaagcagcagtcagca
cgccagccgtttaccatcaacagtatgtcaggatttggaatggggcggagccaggggttt
ggaatgaactccttatccaataacatcttcaacgggacagatgggagcgaaaatgtgacc
ggaatagacctctcagaattcccagcactcgcagacagaagtcgaagagagggaaacggc
aacccaacaccgttgcataatccgctgtctggaagggcaccttatgtcggaatggtcaca
aagccatcgaacgaacagtcgcaggacttctccattcacaacgaagacttcccagctctg
cccggacccaactacaaagacccaacgttgagcacggatgaaagcaaatcaagcttgaac
tcatcaggcaaaggcagctcaagcactgacggacccaagttcccgggcgataagacatca
tcagcacagaataacaaccagcaaaagaaagggatccaggtgttgcctgatggcaaggta
acaaacattccctcaggaatggtgacggatcagttcggaatgatcggactcctgacattc
atccgggcagctgagacggaccctgggatggttcacctggctttaggaagtgacctaaca
acgctaggacttaacctaaactctccagagaatctgtatcccaagtttgcatctccgtgg
gcttctgctccatgtcgaccacaagacattgacttccatgttccctcagagtacctaacc
aacattcacataagagataagctggctgcaataaaactgggacgatacggtgaagatctt
ctgttctacctctactacatgaacggaggagacctcttacaactcctcgctgctgtggag
ctcttcaaccgggactggcggtaccataaagaagaaagggtttggatcacaagagcacct
ggcatggagcccacgctaaagaccaacacttatgagagaggaacatactacttctttgat
tgtcataactggaggaaggttgcaaaggtaaaggagtttcatctggaatacgacaagcta
gaggagcggcctcacgtgccaaccaccttcaactacaatccggcccagcaggctttctga
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