Misgurnus anguillicaudatus (oriental weatherfish): 129433272
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Entry
129433272 CDS
T09481
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129433272 (rfwd3)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129433272 (rfwd3)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129433272 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
Beta-prop_THOC3
zf-RING_UBOX
WD40
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
zf-rbx1
EIF3I
zf-C3HC4_3
zf-RING_5
Beta-prop_EML_2
Rtf2
WDR55
Beta-prop_WDR3_1st
zf-RING_Vps41
WD40_WDHD1_1st
WD40_Prp19
zf-RING_11
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Myo5a
WD40_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
NapD
DUF4200
Motif
Other DBs
NCBI-GeneID:
129433272
NCBI-ProteinID:
XP_055047831
LinkDB
All DBs
Position
6:complement(6595845..6609742)
Genome browser
AA seq
666 aa
AA seq
DB search
MEDMEVDPQVEVIARPNEENLIVVSDSDSSTDEEDSSIQIIDLSDRARRSAVGNAQRQLI
DDQFVGHSYTERLLSLIHTVQEMSRVSPVRRSNHTPTTTTSEPSVSTASEGTDAVAQPLT
QPETRPEAQSQTRPEAQPQTRPEAQPDHPKPDTEPVSESIQQTAPAVNPAAQGGGDDEDG
ETCSICFEPWTMAGKHRLAALRCGHLFGYECINRWLYGGNKCPQCNKKAKRDHIIFLYAR
KLQAVDNTEEVQLKKSLEDEQRLRRMKEMETAQCRLQLQTIKDENTRLQKEVEELRRLKA
QVAFSSSQGAALSLSQRQDSSSGGRYVFSTAVLVSQAGGCRVLSHCERLGCLLASQPSPQ
ATFLPGFGVKKISTANLKPSQYVPIHSKQIRGLAFSQQHDSLLLSAALDNTVKLTSLMAN
TVVQTYNTGRPVWSCCWCHDNNNYIYAGLCNGSVLVYDTRDTSTFVQELVPLGSKCPVVS
LSYIPRAASSSFPCGGLIAGTLDGGCFWEHSEGTVYTPHILPLESGNCTDIQVEPDSRHC
LITYRPGRLNPALRCVLMELNRSPHSDNGQPPVCSCSPVQTFTAGSSCKLLTKNAVFKSP
AGEASTLVCAGDESTNSTMVWDAGTGALLQKLPADLPVLDICPFEVNQSSYLGSLTEKML
KVYKWE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatggaggtggatccacaagtggaggtaatagcgcgtccaaatgaggagaat
ctgattgtagtgtctgattctgacagcagcacggatgaggaggattcatccatacagatt
atagatctgtcggatcgagccagacgttcagccgtcgggaatgcccaaagacaacttata
gatgatcaatttgtaggacacagttacaccgaaagacttctgtcactcatccacacagtg
caagagatgtcacgagtgtctccggtgcggcgctccaaccacacacccactacaacaacg
tcagagcccagtgtttctacagcgtctgaagggacggatgctgtagctcagccactaaca
cagccagaaacacggccggaagcacagtcgcaaacacggccggaagcacagccacaaaca
cggccggaagcacagccagatcatccaaaaccagacactgagccggtctcagagtccatc
cagcagactgcacctgcggtaaatccggctgcacagggcggtggagatgatgaagacggt
gaaacctgctccatctgttttgaaccttggacaatggctggcaagcaccgcttggccgcc
cttcgctgcggtcacctttttggctatgaatgcattaatcgctggctttatggtggaaat
aaatgtccacagtgtaataaaaaggccaaacgtgatcacatcatctttctttatgcacga
aaactccaagccgttgacaacacggaagaagtacaactaaagaaatctttagaggatgaa
cagaggttacgcaggatgaaagagatggagactgctcaatgtcgtctgcagttacagaca
ataaaagatgaaaacacaagactacagaaagaggttgaggagttgagaagattaaaggct
caggtggccttcagttcctctcagggagctgcgttgtctttatcccagcgccaggactca
tccagtgggggacgctacgtcttttctacagcggtgcttgtttctcaagcggggggctgt
agggtgttgtcccactgtgagcgcctcgggtgcctcctggcgtcccagccctccccacaa
gcaacatttttaccaggctttggagtgaagaagatcagcaccgccaatctcaaacccagt
cagtacgtccccattcactccaaacagatcagaggtctcgccttcagccaacagcatgac
agcttactgctgtccgcagccctagacaacactgttaaacttactagcttaatggccaac
acagtggtccagacctacaacacaggcagacccgtgtggagctgctgctggtgccatgat
aataataactacatctacgccggtctctgcaacggatcagtgctagtgtacgatacacga
gacacaagcactttcgtgcaggagttagtaccattgggctccaagtgtccggtggtgtct
ctgtcctacatacctcgcgctgcctccagttcgttcccatgtggcggtctcatcgctggt
acgctggatggtggctgcttttgggagcacagcgaaggaactgtgtacacgcctcacatt
ctgcctctggagtccggtaactgcacagatatacaggtggagccggacagcagacactgt
ctcatcacatacaggcctggtcgtttaaacccagctctgcgttgcgttctgatggaactc
aatcgaagccctcactcagacaatggccagcctccagtgtgctcttgttccccagtccag
accttcactgctggctcctcgtgcaagttactcaccaagaacgctgtctttaagagtcca
gctggagaggcttctacattagtgtgtgctggagatgagagcacaaactcaaccatggtt
tgggatgccgggactggggccttacttcaaaaacttcctgcagatcttcccgtactggat
atctgtccctttgaggtgaaccagagcagctaccttggatctctaactgagaagatgctg
aaagtctataagtgggagtga
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