Misgurnus anguillicaudatus (oriental weatherfish): 129433394
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Entry
129433394 CDS
T09481
Symbol
acanb
Name
(RefSeq) brevican core protein isoform X1
KO
K06792
aggrecan 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
manu00535
]
129433394 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129433394 (acanb)
04091 Lectins [BR:
manu04091
]
129433394 (acanb)
Proteoglycans [BR:
manu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
129433394 (acanb)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
129433394 (acanb)
Lectins [BR:
manu04091
]
C-Type lectins
Lecticans
129433394 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
129433394
NCBI-ProteinID:
XP_055047943
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All DBs
Position
6:complement(19997805..20013028)
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AA seq
1336 aa
AA seq
DB search
MSLTLLLLCACISVISGTPVFFGDMSDQDSTISVSIPVEQPLRPLLGGSMVIPCYFQDNT
VHDPGAPTIAPLAHRIKWSYIYKGKITLILVATGGMVKVERDYLDRVHLVNYPMVPSDAT
IEISELRSNDSGTYRCEIMQGIEDNYDSVEMQVQGIVFHYRAISTRYTLTFEGAKAACIQ
NSAVIATPAQLQAAYDDGFHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRD
VNETYDVYCFAEKMSGRVFYSFSVDKFTFPEAKDQCAKLGAQLATTGQLYLAWMTGMDVC
NAGWLADRSVRYPINIRRPQCGGGLLGVRTVYLFPNQTGYPLPDSRYDAICYHEQEEKVP
TKTTLFPETFITTTESTFSVATVTLSPTVYTEQVTTQGEVRGVTEEMINITGTEETLSQP
PNVTETSSIVEEDVIGAATANPNLGFELTKDNVTSGNLSDTFEDDMVNATGTDLTTNMTE
TELPGPAHPLVPPISVNISESGSASGHPDHSSGDISGSGSASGHPDHSSGDLSGSGSASV
HPDHSSGDISGSGSASGHPEYSSGDISGSGSTSGHPDHSSLDISGSGSASGHPDHSSGDI
SGSGSASGHPDHSSGDISGSGSASGQSDIFESDSGSGHLDLSSGDISGVGSTSGHLDLSS
GDISGVGSTSGHLELSSGDISGSGSALGYHLDLSSGYISGSSSGSGSHDLSSGDITGSGY
AHFSSGDMSGSGERSGSGQSGEESGFPVSFLGGADTLIWGTSASKTAQERREGSGGYITI
GPESGLYKEGSWASGLPSGLGSGTSGFGASGLSSGLSSEVSGLGASGLPSGLSSEVSGSG
ATGLPSGFSSEVSGSGVSGFPFGFGSELSGSGASGLSSGFGSEISCSGTIGFPSGSGSEV
SSLEASGLPSVFGSGVISSGSSGMYSGADISGSGLFSVSFLDTEMTDLTAIPSGEQELSG
VSPFSLKDVSGSGSASSASGFPSHPSGDISGHPERLNRKIVMLTDDEIIEFVSGSTTRTE
QEQGRGSVEFSGEVSGHEYSAMGISISPSSILSAKNTDDLPVIDDLPVTEEEFHSTTNVF
DVTDESPVETTPSTISAFITSPSVSLQPPEAMKDPTVTEVLQGCAEGWMEFMGSCYIHFD
ERLTWADAEQRCQELNAHLVSIFSQQEQDFVRTQAHNYQWIGLNDKDVENEFRWTDGSNL
EYRNWRPNQPDNYFSTGEDCVVMIWHEDGRWNDVPCNYHLPFTCKRGPVTCSSPPEVENA
KMLGNRKDRYPVNSIIRYQCNSGFTRRHLSVVRCMTDGQWEEPQVQCIGETNNRLRKRSL
KTHPKAVNSRTWRKTL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaactttgcttctgctatgtgcatgcatcagtgtcatttccggcacaccagtg
ttttttggagacatgtctgatcaggacagcacaattagtgtaagcatccctgtggaacag
ccactgcggccccttctgggggggagtatggttatcccctgctacttccaagacaatact
gtccatgaccctggagccccgaccattgccccactcgcccaccgtatcaagtggagctac
atatacaagggcaagataacccttattctagttgccactggaggcatggtaaaggttgaa
agagattacttggaccgggtccatttggtaaattaccccatggtgccatccgatgccacc
attgagatctcagaactccgttccaatgactctggcacctacaggtgtgagatcatgcaa
ggcattgaagataactatgactcggtggaaatgcaagttcaaggtattgtgttccactac
cgagcaatttctacccgatataccttgacattcgagggagcaaaggcagcctgcatccaa
aacagtgctgttattgcaactcctgctcagctacaagcagcctatgatgatggatttcat
caatgcgatgctggttggctctcagatcaaactgtgaggtatcctattcatgaaccaaga
gagccttgttatggtgacaaggaaaactttccaggtgtacgaacatatggagtccgagat
gtcaacgagacctacgatgtctactgttttgcagagaaaatgtcaggcagagtgttttac
tccttctctgtggacaagttcacatttccagaagctaaagatcagtgtgcaaagctggga
gcccaactggccaccacaggtcaattgtatctggcatggatgactggcatggatgtgtgt
aacgctggctggctagcagacaggagcgtgcggtaccccattaacatacgtcgaccccag
tgcggtggaggccttttgggagtacgaactgtttacctgtttccaaatcagactggctac
ccccttccagactctcgctatgatgcaatctgttaccatgagcaagaagagaaggttcca
acaaagaccacactattccctgaaacatttattactactactgaatccacgttcagtgtg
gctacagtcactttaagccccacagtgtacactgaacaggtgaccacacagggtgaggtc
cgtggagtgaccgaagagatgatcaacattactggtacagaagaaaccctatcgcaacct
cccaatgttactgagacaagctcaattgtggaagaggacgtgatcggagcagccactgct
aatcctaacctgggattcgagttaaccaaagacaatgtgacctctggaaatctatctgac
acatttgaggatgatatggtgaatgctacagggacagatctgacaactaacatgacagaa
acagagctgcctggtcctgctcatccactcgtccctcccatttctgtgaacatatctgaa
tcaggctctgcatcaggtcatcctgaccacagttctggggacatatctggatcaggctcc
gcatctggtcatcctgaccacagttctggagatttatctggatcaggctccgcatcagtt
catcctgaccacagttctggggacatatctggatcaggctctgcatctggtcatcctgaa
tacagttctggagatatatctggatcaggctccacatcaggtcatcctgaccacagttct
ttggacatatctggatcaggctctgcatctggtcatcctgaccacagttctggagatata
tctggatcaggctccgcatcaggtcatcctgaccacagttctggggatatttctggatca
ggctcagcatcaggtcaatctgacatttttgaatcagactcaggatcaggtcatcttgat
ctcagttctggggacatttctggagtgggttctacatcaggtcatcttgatctcagttct
ggggacatttctggagtgggttctacatcaggtcatcttgagctcagctctggagacatt
tctggatcagggtcagcattgggttatcatcttgatctcagttctggatacatatctgga
tcaagctcaggatcaggctctcatgatttgagttctggggacataactggatcaggctat
gctcatttcagttctggagatatgtctggaagtggggaaagatctggttctggccaaagt
ggtgaagaatctggttttcctgtgagttttcttggaggtgcagacacactcatttggggg
acctctgcttcaaaaactgctcaggagagaagagaaggtagtggtggttacattactata
ggcccagaatctggactctataaagaaggaagttgggctagtggccttccatcaggactc
ggtagtggaactagtggttttggagcaagtggcctttcttcaggactcagcagtgaagtt
agtggtttaggagcaagtggccttccatcagggcttagcagtgaagttagtggttcagga
gcaactggccttccatcaggatttagcagtgaagttagcggttcaggagttagtggcttt
ccatttggatttggaagtgaacttagcggttcaggagccagtggcctttcttctggattc
ggcagtgaaattagttgttcaggaactattggctttccatcaggttccggcagtgaagtt
agcagtttagaagctagtggccttccatcagtattcgggagtggagttatcagttccgga
tcaagcggcatgtacagtggtgctgacattagtggttcaggcttattcagtgtgtcattc
ttggacacagaaatgactgatctaactgcaataccatctggagaacaggaattgtctggt
gtttctccatttagcttaaaagatgttagtggttctggctctgcttcttcagcatctggt
tttcccagtcacccatcaggtgatatatctggccaccctgagagattaaatcgtaagatt
gtgatgctaacagatgatgaaatcattgagtttgtctctggatctacaactagaacggaa
caggaacagggtcgtggatctgtggagttcagtggagaggtcagtggtcatgagtattca
gctatgggcatctcaatctctcctagtagcattttaagtgccaaaaatacagatgatcta
ccagtaatagatgatctaccagtaacagaggaggaatttcatagcaccacaaatgtgttt
gatgtcactgatgagtccccagtggaaaccacaccttccaccatttcagcattcattact
tctccttctgtctcgttacaaccaccagaagctatgaaggatccaactgtcaccgaggtg
ctacagggatgtgctgaggggtggatggagttcatgggcagctgctacatccactttgat
gagcgtttaacctgggccgatgctgagcagcgctgtcaggagctaaatgctcatctggtt
agcatattttctcagcaagaacaagactttgtcagaactcaggctcacaactatcagtgg
atcggactcaatgacaaagacgtggaaaatgagtttcgttggacagacggaagcaatttg
gaatatagaaactggagacccaaccagccagataattatttcagcacaggggaagactgt
gttgtaatgatatggcatgaagatggcaggtggaacgacgtgccctgcaactaccatctt
ccctttacttgcaagagaggacctgtcacatgttcatcacctcctgaagtggagaatgcc
aagatgttaggcaaccgcaaagatcgctaccctgttaattcgatcatacgctaccagtgt
aatagtggattcacacggcgccacctttctgtggtgcggtgcatgacagatggtcagtgg
gaggagcctcaagtccaatgcataggtgaaacaaacaacaggctacgtaaaagatccctc
aagacacatcccaaagcagtcaacagtcggacatggaggaagaccctctaa
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