Misgurnus anguillicaudatus (oriental weatherfish): 129433447
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Entry
129433447 CDS
T09481
Symbol
spg11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129433447 (spg11)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129433447 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
129433447
NCBI-ProteinID:
XP_055048044
LinkDB
All DBs
Position
6:complement(32343796..32737648)
Genome browser
AA seq
2376 aa
AA seq
DB search
MLEVLNSSDQALEVDLLLCDHDVCDSVDIRLAKGSSFMCCLDSEGKLSVINICDSSSSVH
KLHEASYTDFCWEDLSDHNRHNFIPNLLAVDSQCNLRLYKVDPHGEVVLVSEVSSDSLLE
SVKDKQSETAEMRTVRLLSFTDGRCLLLVNTCVVVQVRWIQESSHLESLSSCRLSLTPQI
QDMCVDYRLCRAILFVLLSTGLTYVFDSTDGKLMATVDFLSYCGLGQTDTDSSPPVTCCL
FQISHDLNTAVVVTCQNQALAVDLNDYFRMYPDHLLCRAAPNRPFLRPVESWDHDSLSSS
AHSLLVLDTQLQTDRSWESRLSSLYSRCKSLKRPAHGSPWYRDFPHVECHRAAATAKLSR
PSVKPGGAVMCFNVPERATAAMLTVSEFSAVVTFVAPENSNTCVAYWDLESQNVTYHHTD
TPAVPVQRSAEEHLCLLMKRSGLSVVLFCVTQEELLNRLMVFGTAGTVDSLCHLNTWGRC
SIPIHALQAGLKNHQLDTVDFFLKSKENILSPASGFVLPDQTSSVSSQTQLRNIHALCPA
LDLLRSAIQDTHTEAQSRQFCEQLLSITLTFLNTQSRVLLTSTHELDVHLQECVQILDGY
ISDLRAYMKKYPFPDVGDTEMPTRPRAPASDAATEHEWLSLSDEEVVQRAVLSRQIPYAQ
AFLRRRGSVECSLEDIRKTGLRCVFTCLTNRDLQRAETLLTNMGFNVKERLHSICVYTAD
RDLRAFMVKELQRQSYLSAVEVQQVEFIKTIETLCSTPATRCSKPLNPSRVLQMTRSDPE
TRRVLEKIVKEPDASSSSRSLLDSVRLDWVRYWDTDTQSFVLLSRLQDSTVGTCDPVALW
SYLTSLHDLGRVTSWVCSMTTADTETTAAPCWPLLTPHIINNYSRCGEYLQNQILDLLAR
QELFVQSEMDDFEQLLWRLAQAGGVMQDGSGPPVPQYLSSQGQEFHQRFILHCLENSLQY
LLYTYLQHYRLTPGNCPGLTDRNLLESFPWFEMMLKLQRITRDLKDPERVFRASLTGAQV
LLPGSQASISSMLLEGHSLLALSTIMFRPGGIDQALREGETGQDPLSRVDPQLLRMALSA
YPKLKTALFPQISPRGVSVCDISLYHLMQSLQPLDSSRLFSWQAGNAVGSTETSGEPPHF
SSSHLVNKFAIIENLDYLYYLSHGRPAFAYGVFLTQHLINCSNAKLQLSQAVEQVFSLSL
LNFNTSSVTAACVCFCELLGVCSLKLRVDLKVLNLILKLWRQDCEDGDRASIKQTLVEKA
SKLISHEKQTAQELLVHLEAAVRDSLEKKAISRSSYEAAHEWALPVRFCHLHALPLSSAY
LQDCACDGQWINFLLFVQLHNYPPEQVISLAAGFSPALQAHISLAFQDLQPMSSHQIRDE
NPEPSREVFQVLLNSQEKPNPWRYLLCEAVRQHAPVLSVLAACHQGADLLQCLCVWILTS
VEDEISEEATAHINENPSHHTWNLHDLSILWKTLLNKNRVKPLIRGFQLFQRESPLINML
SMYELCYDYKDYQEAKDKLLHFQKCLLNLRSSSVVLSCDVLPVQWVESQASVLLLVLLKQ
CRTQYELRRLLQLLVDMERLLKSNGPDFKKLSQLSQVLSDTPVLLSPCLLEDYSTSGLQG
ECRKMLEQLQDMGLFTQARKVAQLAELPIDCLIITELLRDLSALKAKRQWDRQETRLVFW
RKCHQQLKVDHVDPEAACQFFLSQAEEPLQSDSEAIQLQERCLLLGLAGHWLSCRESPLP
VLRLAQLEKRQWEYRIQWLVLRTALEQESLFAPSALSEDSFENLLKEFSFSKMAALNDQM
HLSVEGLPVTEEDCALSERDRKALSALIGQLLNEGSVNEASRVCRYFDLFHRDVWLVLRC
RGLACGDLQPGPQELHSPEGESKRSLPLSPSMSSLSSFVVVSSPEDPVLVQLKQLVDQCC
HGKSYCKQVLSLYELSKELQCPYTEISSLEPEAVLCKVLLSQQSDRCKRAQAFISVQGLQ
PDAVARLISSAVVEGLLGSSQEGETGDHLMYGPVDSREEFIQLAKLCGDPNLVGIRLLEI
ISTVPLSELSCIVEILILAHDCFSLTCNMEGIVRVLQAARHLSHTHLAHGEGYGLLVRLL
TGIGRYNDMTYIFDLLHQNHRFEMLLRKKVESNVRLKTALLDYIKRCLPGDSEKHNMVAL
CFSMCREIGENHEAAARTQLKIIESQPWAITGDLKNALVKVMTLLKDAAESYSKDSCVRQ
AVKCVKLAKLVTLQLYFMNHGQEQRVINLRPAELHSTIVTLPRCYQAFVLAEAYDYSPDW
AEVLFHKIILNGEFIYLEEFKRHRSLPTSLFEEISKKMLHHNPPASSSQNLKKLLSHCED
VYVHYKLAYEHKFLDVANMLLQDSKTNSFLNDRLGT
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgttagaggtgttaaacagctcagatcaggcgttggaggtggatttactgctgtgtgat
catgatgtttgtgacagtgttgacatcagattggctaaaggttcatcgtttatgtgttgt
ttggatagtgaaggtaaactgagtgttataaacatctgtgacagcagctcatcagtacac
aaactgcacgaggcttcatacacagatttttgttgggaagatctgtcggaccacaacaga
cacaatttcatcccaaatttgttggctgtggactctcagtgcaatctcagactttataag
gtggacccacatggtgaagtggtcctggtgtctgaggtctcatcagattctctactggag
tctgtcaaagacaaacagtcagagacggcagagatgaggactgtgagattgctgtctttc
acagatggccgctgtttgttgctagtgaacacttgtgttgtggtccaggtcagatggatt
caagagtcctcacatctggagtcattgtctagctgtcggctcagtttaacccctcagatc
caggacatgtgtgttgactatcgtctgtgtcgtgcgatcctgtttgttctgctcagtact
ggactgacatatgtgtttgacagcactgatggtaaactcatggccactgtggattttctg
tcgtactgcggtttaggacagacagacacagactcttctccacctgtaacgtgctgtctt
ttccagatctcacatgacctcaacacagccgtagttgtcacctgccaaaaccaagcactc
gccgttgacctgaatgattacttccggatgtatccagatcaccttttgtgtcgtgcggcc
cctaatcgtccatttctgaggcctgtggaatcatgggatcatgacagtctttcaagctcc
gcccacagccttttagtactggatacacagctccaaacagacaggtcatgggagtctcgt
ctgtcttcactgtatagccgctgtaaatccctgaagcgtccggcgcacggttcaccctgg
tacagagatttcccacacgtggagtgtcatcgggcagcagccactgctaaactctcccgg
ccatccgtgaagccagggggcgctgtgatgtgttttaatgttcctgagagagctacagca
gcaatgctgaccgtgtccgagttctccgcggtggtgacatttgttgctcctgagaacagt
aacacatgtgtggcttactgggacctggagagtcaaaatgtcacataccaccacacagat
acacctgctgtacctgtccagcggtcagcggaggaacacctgtgtctcttaatgaagagg
tcgggtctgtctgtggttctgttctgtgtgacccaggaggaactcttaaacagactgatg
gtttttggcacagccggtacggtcgactcgctgtgccatctaaacacctggggacgttgt
tcaatccccatacacgctctgcaggccggactgaagaaccaccagctggacacggttgat
ttcttcctgaagagtaaagagaacatcttgagtccagcatctgggtttgttctgcccgat
caaacgtcatcggtctccagccaaacccagctgaggaatattcatgctctgtgtccggct
ctggatttactacgatctgccattcaagacacgcacacagaagcacagagtcgacagttc
tgtgagcagttactgagcatcacgctgaccttcctcaacacacagagcagagtcctcctc
accagcacacacgagctggacgtccacctgcaggagtgtgtgcagattttagacggctac
atctcagacctgagggcttacatgaagaaatatccgtttccagatgtgggcgacactgag
atgcccacccgtcctcgagcccctgcatctgatgctgcgacagaacacgagtggttgtct
ctgtctgatgaggaagttgttcagcgtgctgtattgagcagacagattccgtatgcgcag
gcttttctgcgcagacgcggctctgttgaatgcagtcttgaggacatcaggaagaccgga
ctgagatgcgtcttcacctgtctcactaacagagacctgcagcgggctgagacgctcctc
accaacatgggctttaatgtaaaggagcgacttcacagtatctgtgtttacactgctgac
cgagatctaagagctttcatggttaaagagctccagaggcagagttacctgtcagctgtg
gaggttcagcaggtggagtttattaaaaccattgagactttatgttcaacgcctgcgacg
agatgctccaagcctttgaaccccagcagggttctgcagatgacccggtctgatccagag
accagaagagtgctggagaaaatcgtaaaggaaccagacgcctcctcctcctccaggtct
ttactggattctgtgcgtctggactgggtcagatactgggacacagacacacagagtttt
gttcttctgtccagactacaggactcaactgtgggtacgtgtgaccccgtcgctctctgg
tcatatctcacttctcttcacgatttgggccgggtcacctcgtgggtctgcagtatgaca
acagcagatacagagaccaccgctgccccctgctggcctctactgacgccacacatcatc
aacaactacagtcggtgtggggaatacctgcaaaatcaaatcctggacctgcttgctcga
caggagttgtttgtccaatcagagatggatgattttgagcagttgctatggcgattggct
caagctggaggagtgatgcaggatggaagcggcccacctgtcccacaatacctttcttca
cagggtcaagagtttcaccagcggtttattctgcactgtctggagaacagtctgcagtat
ttactctacacgtacctgcaacactacaggttaactcctgggaattgtccgggtctgact
gacaggaacctgttggaaagttttccctggtttgaaatgatgctgaaattacagcgaatc
accagagatctcaaagacccggagcgagtgttcagagcgagtctgactggagctcaggtc
ttgttacccggcagtcaggcgagcatcagcagtatgttactggagggtcacagtcttctc
gctctatctacaatcatgttcagaccgggcggcattgatcaggcattgcgagaaggagag
acgggtcaggaccctttgagtcgagtggatcctcagctgttgagaatggctctgagtgcg
tatcccaaactcaaaacggcccttttccctcagatcagccctcgtggggtctccgtctgt
gatatatctctctatcacctcatgcagtctttgcagccattggattcctccagactgttc
agctggcaagcagggaacgcagtgggcagcaccgaaacgtctggcgagccgccccatttc
tccagctctcacctggtcaacaaattcgctatcattgagaatctggactatctctattat
ctgagccacggtcgcccggcgtttgcctatggggtttttctgacacaacatctcatcaac
tgcagtaatgcaaagttacagttaagtcaagctgtggagcaggtcttctctttatctctg
ttaaacttcaacacttcatctgtgacggcggcgtgtgtgtgtttctgtgagctgttgggt
gtctgtagcctcaagctgagggtggatcttaaagtcctcaacctcatccttaaactgtgg
agacaggactgcgaagatggagacagggcttccatcaaacaaacactggtggaaaaggcc
agtaaactgatctcccatgagaaacagacggctcaggagctgctggtccatctggaggca
gcagtcagagattctctggagaagaaagccatcagtcggtcgtcatacgaggcggcacac
gaatgggctttacctgtgcggttctgtcaccttcacgctctgcctcttagctccgcctac
ctgcaggattgtgcatgtgatggacagtggattaacttcctgttgtttgtacagctgcac
aattatcctcctgaacaggtaatctctcttgctgccggtttcagtccggctctgcaggct
catatctctttggcatttcaagaccttcagccgatgagctctcatcagatcagagatgaa
aacccagaaccttctcgagaagtgtttcaggttctgctcaacagccaagagaaacccaat
ccctggagatacctgctgtgtgaagccgtccgtcagcacgctcctgttctctctgtactg
gccgcctgccatcagggtgcagatctgcttcagtgtctctgtgtttggatactgacgtct
gtagaggatgagatctctgaggaagcaacggcacacatcaacgagaaccccagccatcac
acctggaaccttcatgatctgtccatcttatggaagaccctcctcaacaagaacagggtc
aagcctctgattcgtggctttcagctctttcagagggagtctccattgattaacatgtta
agcatgtatgaactctgttatgactacaaagattatcaggaagccaaagacaaacttctg
cacttccagaaatgtctgctcaacttgaggagcagcagtgttgtgttgagttgtgatgtt
ttgccggttcagtgggtggagtctcaagcgtcggttcttctgttggttctcctgaagcag
tgcagaactcaatatgaactccggcgtctcctgcagctgctggtggacatggagcgtctg
ctcaaatccaacggtccagactttaagaagctcagtcagttgagtcaggtgctgtcggac
acacccgtgctgctgtctccgtgtcttctggaagattattccacctccggcctgcagggg
gagtgcaggaagatgcttgaacagctgcaggatatggggctcttcacgcaggcgaggaaa
gttgcgcagttagctgagctgcccatcgattgcctgattataactgagctcttgcgagat
ctgtctgctctgaaagccaagcgtcagtgggacagacaggagactcgtctggtgttttgg
aggaagtgtcaccagcagctgaaggtggatcatgtggatccagaggcggcctgtcagttc
tttctatctcaggctgaggagccgttacagtcggattcagaagccattcagcttcaggaa
cgctgtctcctgttgggtctggcgggtcattggttgtcctgccgtgagtctccgctgccc
gtcctgcgtctggcacagctggagaaacgtcagtgggaatatcgaatccaatggctggtg
cttcgtaccgctttggaacaagagagtttgtttgcaccctccgctctctccgaagattcg
ttcgagaacctcctaaaagagttttctttttccaaaatggccgccctgaacgaccagatg
catttgagcgtagagggtcttccggtgaccgaagaagactgcgcgctatctgaacgtgac
cgtaaagcattgagtgctctcattggccagctgctgaacgaggggagcgtgaatgaagcc
agtcgcgtgtgtcggtactttgacttgtttcacagagatgtgtggctggttttgagatgt
cgtggtttggcgtgtggagatctccagcctggaccgcaggaacttcacagcccggaagga
gagtcgaaacgcagtttaccattatcccccagtatgagcagtctgtcatcttttgtggtg
gtctcatctcctgaagatccagtcctggttcagctcaaacagctggtggatcagtgctgt
cacggcaagagttactgcaaacaagtcctcagcctttatgagctttcaaaggagcttcag
tgtccatacacagagatctcatctctagagcccgaggcggttctgtgtaaggttctgctc
tcgcagcagtctgatcgctgtaagagagctcaagcgtttatcagcgttcagggtctgcag
cccgacgccgtcgctcggctcatttcttcagctgtggtcgagggtctgctcggttcttct
caagaaggtgaaacaggagaccatctcatgtacggtccggtggacagcagagaggagttc
attcagctggccaaactgtgtggagatccaaacctggtgggaatcagactgctggagatc
atctctacggttcctctgtcagagctcagctgcattgtggagattttgattttagctcac
gattgcttcagtctcacgtgtaacatggagggtatcgtgagggtccttcaggcggccaga
cacctcagtcacacacatctggctcacggtgaaggttatggactgctggtgcgtttgctc
acgggtatcggccgctataatgacatgacttacatctttgacctgctccatcagaaccat
cgctttgagatgctactaagaaagaaagttgaatcgaatgtaagactgaagacggctctg
ttggattatatcaagcgttgtctgccgggtgacagcgagaagcacaatatggtcgctctg
tgtttcagcatgtgtcgtgagatcggagaaaatcacgaggccgctgcgcgaacacagctc
aagatcatcgaatcacagccgtgggcgatcactggagatctgaagaacgctttagtgaaa
gttatgactttactgaaagatgcagctgagagttactcaaaggactcgtgtgtgcgtcag
gctgttaaatgtgttaaactggctaaactggtcactcttcagttatattttatgaatcat
ggacaagagcagcgcgtcatcaatctacggccggctgaacttcacagtaccattgtgact
ttaccgcgctgttaccaggcgtttgtgttagctgaagcgtacgactacagtccagactgg
gccgaggttctgtttcacaagattatactgaatggagaattcatctatctggaggagttt
aaacgccacagatcgctgcccaccagtctgtttgaggagatctccaaaaaaatgttgcat
cacaatccgccggcgagttccagtcagaatctgaagaagctgttaagtcattgtgaggac
gtttatgtgcattataaactggcctatgagcacaagtttctggatgtggcaaacatgctg
cttcaagactccaaaaccaacagctttctgaatgacagactgggcacataa
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integrated database retrieval system
