Misgurnus anguillicaudatus (oriental weatherfish): 129433450
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Entry
129433450 CDS
T09481
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03022
Basal transcription factors
manu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129433450 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
129433450 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129433450 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129433450 (gtf2h1)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129433450 (gtf2h1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129433450 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
129433450
NCBI-ProteinID:
XP_055048056
LinkDB
All DBs
Position
6:30987674..30998103
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKRVRQKKQDGTLYLMAERIVWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDREATKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNSVDHSLSNNKQQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPTVKQKYAENVPHTMTEKEFWTRFFQSHYFHRDRINTGQQ
DIFSECAKQDEKGLKSMVTQGVKNPMVDLLSLEDKTLDDGYGTATVPSTSNATNKTLREN
SNCAIIKRFNHHSAMVLAAGLRKTEAPSDQTSETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYDDLQSDYRPKPISLNLKKSDRYSHGPVPLQSQHYTSSQDIMNSISIIQHEMKSYKPCL
TQVMSSSAASSAITALSPGGVLMQGGGQQTVNQLVPTDVQSELKHLYTAVGELLRHFWSC
FPVNTPFLEEKVIKMKSNLERFQLTRLRPFQEKIQRQYLSTNLTGHLEEMLQAAYSKFQA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtcagaagaggtgttgttggtggtaaagagggtccgtcagaagaagcag
gacgggactctatatctgatggctgaacggatcgtctggggtccggagggcaaggaccgc
ttcaccgtcagccatctgtatgccgacatccgctgtcagaagatcagtcctgatggtaag
gcaaaaatccagctgcagttggttttgcacacgggtgaaagcaccacctttcattttgcc
aatgaaagcacagcactgaaggacagagaagccactaaagagctcctacagcaactcctg
cccaaattcaagaagaaagcaaacaaagagctggaggagaagaacaggatgttgcaggaa
gaccctgttctcttccagctttataaggatttagtggtgagtcaggtgatcagcgcagag
gagttttgggccaatcggctgagcctgaattctgtagaccactccctctccaacaacaaa
caacaggaagtgggcatctctgctgccttcctggccgacatcagaccgcagacggacggt
tgcaacggtctgcggtataacctcacctctgacatcatcgagtcgatcttcagaacctat
ccaacagttaagcagaaatatgctgagaacgttcctcacaccatgactgagaaggaattc
tggacgaggttctttcagtctcattacttccacagagatcgaatcaacacgggccagcag
gacatcttctccgagtgtgccaaacaggatgaaaaaggtctgaagtcgatggtgactcaa
ggagtgaagaaccccatggtagatcttctctctctggaggataaaacgttagatgatggt
tatggcacggctacagttccctccacttcaaacgccacaaacaaaacactgagagaaaac
agcaactgtgccatcatcaaacgcttcaaccatcacagtgccatggtgctcgcggccggc
ctgcgcaaaacggaagcccccagtgatcagaccagtgaaaccagcagcacagatggtaac
tccagagactcggatttcttccagccgccgctcaaaaaggtgaaactacaagaagccata
gaatatgacgacctgcagagcgactacaggcccaaaccgatttctctcaacctaaagaaa
tcagacagatactcacacggtccagttcctctgcagtctcaacattacaccagcagccag
gacattatgaactctattagcatcatccaacatgagatgaagagctataaaccctgcctg
actcaggtgatgtccagcagtgcggcgagctcggccatcacagctctctctcctggaggg
gtcctgatgcagggtggaggtcaacagactgttaaccagttagtgcccactgacgttcaa
agtgagctaaagcacttatatacagcagtcggagagttgctcagacacttctggtcttgt
tttcctgttaacactcccttcttggaggaaaaggttattaagatgaaatccaatctggaa
cgatttcagctgactaggctccgcccatttcaagagaaaatccaacgacagtatttgagc
actaacctaaccggtcatctggaggaaatgcttcaggcggcatacagtaaatttcaagct
tggcaaacccgcagaatgatgagaaaaacctga
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