Misgurnus anguillicaudatus (oriental weatherfish): 129433484
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Entry
129433484 CDS
T09481
Symbol
cntn1a
Name
(RefSeq) contactin-1a isoform X1
KO
K06759
contactin 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129433484 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
manu04515
]
129433484 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
manu00537
]
129433484 (cntn1a)
Cell adhesion molecules [BR:
manu04515
]
Immunoglobulin superfamily
Contactins
129433484 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
manu00537
]
Others
129433484 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Ig_5
V-set_CD47
C2-set_2
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
129433484
NCBI-ProteinID:
XP_055048117
LinkDB
All DBs
Position
25:complement(2820929..2854959)
Genome browser
AA seq
1026 aa
AA seq
DB search
MRRISNLLITVSLTLTYNFWIVRCESPGAFGDDSSGYGPVFEEQPVDTIYPEESPEDKII
LTCRARAHPPASYRWRLNNTDVDIMEGIDDHYSLTGGDLIIRFPDRSRDTGNYSCVATNE
FGTVVSRTAFIQFGYLDMFSTDERGAVFVKEGQGAVLLCAPPPHFPEDLSYRWMLNEFPD
FIPLDKRRFVSQSTGNLYISTVRSADSGNYSCFVSSPSIAKSVFSKFIPLVPIPERSLRK
YPADIKVKSPDTYALMGQNVTLECFALGNPIPQIHWKKVDGDLPLRRHDVSMAGSLLHLY
DLQYEDEGLYECEAENSKGKDWHKTHLFVEGAPEWVEKIESSERDIGGNYIMSCVANGKP
KPHVHFLKNGQKLLRNHELHFIDLKFNDSGMYQCIAENRHGTIYANAELKVFAGGPSFEQ
NPVKIKILAAKNGRVVIECKPRAAPRPKISWSKETELLHNSSRIFIWQDGSLEIVNISKS
DEGRYTCFAVNDRGQSNSTGSLSVTDATKITLALSDANVSVGESTRMECNASHDLTLDIA
FIWSHNDHVIDFDQDRDHYHHKMIGDAGTSSSELLIRKTQLRHAGRYTCTAQTPVDNIST
SAELKVRGPPGPPGGVRVDEVTNSSVRVTWSHGTDNLSPISKYIIQLRDNKAQQDWKEAS
TSPVTVEGNAESVTVVNLTPWTDYEFRVIAINTLGTGTPSDPSPKITTKEAKPVVAPSDV
GGGGGASRELTITWTPVQLQYHYGSNFGYIIAFRPHDKREWLKVTVSDPQAHKYIHKDSD
IQPSTKFEVKMKAFNSQGEGPYSVSSFIYSAQDVPSEAPTIVEARALSATEAIVCWMPVQ
LQTVERYQVRYWRQTVENEASAQRVLVSSQENHTRLDHLKPNSHYLIEVRAYNGAGYGPS
SARYEIHTKKAPPSRPPKIIGPKFHSTGKMFNIAWEQVQPLANESTVEGYKVLYRPEDQV
NGDLYTTGKHSIDLPMKKGEYLVEVRAHSEGGDGAVAQVRVSGGGLVKAQSLSISLIFMT
LLSLFL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaatctctaacctcctgatcaccgtctcactcactctcacatacaacttctgg
atcgtccggtgtgaatctccaggagcgtttggtgatgattcgtccggatatggacctgtg
tttgaagagcagcctgtcgacaccatttaccctgaagaatctccagaggacaaaattatc
ctgacgtgccgagcgcgagctcacccacctgcgtcatacagatggagattaaacaacaca
gatgttgatattatggagggaatagatgatcattacagtctgacaggaggagatctcatc
atcagattcccagataggagcagggatactgggaattattcatgtgtggcaaccaatgag
tttgggacggtggtcagtcgcacggcttttatccagtttggatacttggacatgttttcc
acagatgaacgaggggcggtctttgtgaaggaggggcagggggcggtgctactgtgtgct
ccgcccccacacttcccagaagatctgtcgtaccgctggatgctgaatgagtttccagac
ttcattcctctggataaacgtcgctttgtgtctcagagcaccgggaatctctacatctcc
acagtgcgatcggcagacagtgggaattactcctgctttgtgtccagcccgtccatcgcg
aagagcgttttcagcaaattcatccctctggtgcccatccccgaacgttcgctgaggaaa
tatccagctgatattaaagtgaaatctccagacacatatgcacttatggggcagaacgtc
acgctggagtgttttgcgttgggaaatcccatccctcagatccactggaagaaggtggac
ggtgatcttcctcttcgccgtcatgacgtcagtatggctggtagtcttcttcatctctat
gaccttcagtatgaagacgagggcttgtatgaatgtgaagcagagaactctaaaggcaaa
gattggcacaaaacacatctgtttgttgagggggctcctgagtgggttgagaagattgaa
agttcagagagagatatcggagggaactacatcatgtcgtgcgtggccaacggcaaaccc
aaacctcacgtgcactttctgaagaacggacagaagttactcaggaatcatgagttacat
ttcatcgatctgaagtttaatgattcagggatgtatcagtgtatcgcagagaaccgtcac
ggcacgatctacgccaacgctgaactcaaggtcttcgctggcggtccatcgttcgagcag
aaccctgtgaagattaaaatcttagcggctaaaaacgggcgcgtggtgatcgagtgtaaa
ccgagagcggcaccacggccgaagatctcctggagtaaagaaaccgaactcctacacaac
tccagcaggattttcatttggcaggatggaagtttagagattgtaaacatcagtaaatca
gacgagggcagatatacgtgtttcgcagtgaacgacagaggtcaaagcaacagcacggga
tctctgtccgtcacagacgccactaaaatcactcttgctctatctgatgctaatgtcagc
gtgggagagagcaccaggatggagtgcaatgcgtcccatgacctgacccttgacatcgcc
tttatctggtctcacaatgatcacgtgatcgactttgaccaggacagagatcattatcat
cacaaaatgatcggtgacgcagggacgtccagctctgaactgttgatcagaaagacacag
ctgagacacgctggacgttacacctgtacagctcaaacacctgtagacaacatcagtact
tctgcagagctgaaggttcgaggtcctccaggtcctcctggtggtgtgcgtgtggatgag
gtgacaaacagcagcgtgagggtgacctggagtcatgggacagataatctgagtcccatc
tccaaatatatcattcagttaagagacaataaagcacagcaggactggaaagaggcctct
acctctccagtgactgtggaaggtaatgcagaaagtgtcacagtggtaaatctgacacca
tggacagattatgagttcagggtcattgccatcaacacattgggtacaggaacgcctagt
gacccctcacctaaaatcaccacaaaggaagccaaacctgtggttgcaccatcagatgtt
ggaggtggaggaggagccagcagagaactcaccatcacgtggacgcctgtgcagttgcag
tatcactacggcagtaactttggttacatcatcgcctttagaccacacgacaagcgcgaa
tggctgaaagtcaccgtctcagatcctcaagctcacaaatacattcacaaagactcagat
attcaaccatccaccaagtttgaagtgaagatgaaggcgtttaacagtcagggtgaagga
ccgtacagcgtcagctcctttatttactccgctcaggatgttccctcagaagctcctact
atcgttgaggcgagagcgctgtcggccactgaagccatcgtctgctggatgcctgtgcaa
ttacagacagtagaacgataccaggttcggtactggagacagactgtagagaacgaggcg
tctgcccagcgtgtgctggtttccagtcaagagaaccacaccagactggaccacctgaaa
cccaattctcattacctcatcgaggtgcgagcgtacaatggcgcgggttacggaccttcc
agcgcccgatacgagatccatacaaagaaagcacctcccagtcggccgccgaaaataatc
ggtccaaagtttcattccaccggtaagatgtttaacatcgcctgggagcaggtgcagccg
ctggccaatgaatctacggtggagggttataaggtgttgtacagaccagaagatcaagtg
aacggtgatctgtacacaacaggtaaacactccatagatctgcccatgaagaaaggtgaa
tatctggtggaggtgagagctcacagcgagggaggagacggagcggtcgcacaagtgcgc
gtctcaggtggaggacttgtgaaggctcaatctctcagtatctctctgatcttcatgaca
ctcttgagtttattcctctga
DBGET
integrated database retrieval system
