Misgurnus anguillicaudatus (oriental weatherfish): 129433941
Help
Entry
129433941 CDS
T09481
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129433941
04131 Membrane trafficking [BR:
manu04131
]
129433941
04121 Ubiquitin system [BR:
manu04121
]
129433941
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129433941
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
129433941
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129433941
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129433941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129433941
NCBI-ProteinID:
XP_055048657
LinkDB
All DBs
Position
25:complement(12018377..12025490)
Genome browser
AA seq
472 aa
AA seq
DB search
MDQNDNDLQGTDGSVALGGLDVRRQIPIKLLSKQSIRGKPAARPQRSTTRLHSKSDEESF
SYKHDERFECKSGDAYGNQRRYPQPIFWDYKLNLVGAKDDTPVHFCDKCGLPIKIYGRMI
PCKHVFCYDCAVHYEKKCDKTCPGFSLYSCTDPVQRIEQCLRGSLYMCNIVQGCKRTYLS
QRDLQAHINHRHMRASKSGSSRPDPPHPTMASDPQDRFRLPPPPHLTKAHPLHPPPLHDA
YNQPLPVSPSSSDLGPSQRPLPPETFRISTVTTRTHSNLITVPIHDDSGNSGPREAHPQT
PPGPPPHLHPGDYSSQPVVSHPHHIMPPPQQPHYGPPPPPRPLNIPMQHPPQGSATPHMV
YNQAPPMSSAPPPITPPPGHIIGQMPPYMSHPPPGPIPQHGGPPPPHHYNPNSMPQDQGT
LSPPFTQPGGMSPGMWPNPCGPHPPRMQGPPPQGQMPGPHHPDQSRYRQYYQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaatgacaatgaccttcaaggaactgatggttcagtggcactcggaggtctt
gatgttcgcagacagatcccgatcaagttgctgtctaaacagtcgataagaggcaaacca
gctgcccgaccccagcgttccactactagactgcactcaaagagtgatgaagagtctttc
agctataaacatgatgaaaggtttgagtgcaaatccggagatgcttacggaaaccaacgc
agataccctcaacccatattttgggattataagctgaatttggtaggagcaaaagatgac
actccggttcatttttgtgacaaatgtggcctgccaataaagatatatggacgaatgatt
ccctgtaaacatgttttctgctatgattgtgcagtacactatgagaagaaatgtgacaag
acgtgccctggtttctctctctacagctgcacagatcccgtccagcgcattgagcagtgc
ctgcggggttcactttacatgtgcaacattgtgcaaggctgcaaacgcacctacctctca
cagcgagatctacaggcccacatcaaccatcgccacatgagggccagcaaatctggaagc
tctcggccagacccgccgcacccaaccatggcctcagatccacaagatcgcttccggctg
ccgccaccacctcacctgaccaaggcgcaccccctgcaccctccacctctgcacgatgct
tacaaccagccactgccagtctcaccctcttcttcagatctgggaccgtcccagcgtcct
cttcccccggagaccttccggatttccaccgtaactacacgcacgcatagcaacctcatc
acagtgcccatccacgatgactctgggaactctggcccccgtgaggcccacccacagacg
ccacccggcccacctccacaccttcaccccggtgactattccagccaacctgtggtatcc
cacccgcaccacataatgcctccgccacaacaaccgcattacgggccgccaccaccaccg
cgccctctcaacatcccaatgcagcatccaccccagggctcggccacacctcacatggtt
tataaccaagctcctcccatgtcatcggctcccccaccgatcacccctccacccggacac
atcatcggccaaatgccaccttatatgagtcatccaccacctggtccgattccccaacat
ggaggtccacctcctcctcaccactataacccaaactccatgccacaggaccaaggcact
cttagccctccgtttacccaaccaggaggtatgagcccagggatgtggcccaatccgtgt
ggccctcatccacctcgtatgcagggccctccaccacagggacagatgccggggccacac
cacccggatcagtcacgttacagacaatattaccagtag
DBGET
integrated database retrieval system
