Misgurnus anguillicaudatus (oriental weatherfish): 129433953
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Entry
129433953 CDS
T09481
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129433953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129433953
03036 Chromosome and associated proteins [BR:
manu03036
]
129433953
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129433953
Coactivators
SAGA/TFTC/STAGA complex
129433953
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129433953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
129433953
NCBI-ProteinID:
XP_055048674
LinkDB
All DBs
Position
6:20602944..20663131
Genome browser
AA seq
950 aa
AA seq
DB search
MAAVPDPLEDMLYSEVDEKAVSDLVGSLESQLGGQNKSTDTRRPGSSSNAINPHLGKLPP
AQVGTTLEQQRQSEQNPEGKSVENGPDRIQASNSVTSASNLSSNSVSLVTATNRTQYHSP
VSTLSASCSSDAAPTDSHPNTSTNHIRTVPARIQTVNGSSGALNSSVIASAPASVAGLQV
EPRPGSVNGIDIAPGVGKSNMSAPNNPNTVFVSAQPNSTLPQTLDSQANPTIALHRPPNA
IVHNGGDPKVSGLPVQGAAVGLGSSSVAFPNTVASEPKSDPQSQIKAVVPNQLPGGPVGL
HPSTPTQMQASPVVTSLPVASTPSALAKPATTTLVGQPTTLLRPGTPTPGTATAVTQQRP
GAPTTQLVVRPQQQNIQLPPGFTIPPGMVLVRTEVGQLVLVPQQVLAQVKAQNQNKGTLS
PRPATPTATTSFRVAAPVAQKTAVVTITSAQKPTTTVITAGARVQPAPQTVLKPSLTPQS
PTTTTAVAPANRSPVLSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLD
AKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALRLTLLNSQQSLTQLSQTSSTSTAVT
VNTIKAPAPSTLTSTVSSIRPATSLAPATTMAVKRPGVQVTPTRMPVMLTQTVRPQGAVG
THFQVRTPMGVAAQALANQKQKLNDPGGGTFRDDDDINDVASMAGVNLNEENARILATGS
ELVGTQIRSCKDEAFLPNSLLHKRLLETAKKFGVTEVSMETVTLISHATQSRLRSMLEKV
SAVAQHRADSCKDEELYEQASDVRTQLKFFEQLEKMEKQRKDDEEREILMKAAKSRSRQE
DPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDLLGASAGAELPAGSSG
SATGSTSSSTSSVRQTRQRITRVNLRDLIFCLEQERTTARSMLLYKALLK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtccccgatccactggaagatatgctctattccgaagtggacgagaaagcc
gtcagtgacctcgttggctcgttagaatcgcagctcggtggacaaaacaagtcaacggac
accaggagaccgggttcgtcctcaaacgcgataaatccacacttgggaaaattgccgccc
gcccaagtaggaacaacactggagcagcagcgccagtcagagcaaaatccggagggaaag
tctgtggaaaacggtccagataggatacaagcgtctaattcagtcacttccgcatcaaac
ttgtctagtaactccgtatctttggtcacggctacgaatcggacgcaatatcattcaccg
gtatcaactttatccgcgagctgttcaagtgacgcagcaccgacagactctcatcccaat
accagtacgaatcacatccgcacggttcccgccagaatacagactgtgaacggaagcagt
ggcgcgttgaactcttctgttattgcgtctgctcccgcctctgtggcgggattgcaagtt
gaacccagacccggtagtgtaaatggtattgacattgctccaggtgtaggtaaaagcaac
atgtctgctcctaataacccaaatactgtttttgtgtcagctcagcccaacagcacactg
ccacaaactttagatagtcaagcaaatcccaccattgcactgcacaggcctcctaatgcc
attgtacacaatggaggtgaccctaaagtctcaggattgcccgtgcagggtgcagcagta
ggtctcgggtccagttccgtggcgtttcccaacacagttgccagtgagcccaaatctgac
ccccaaagccagatcaaagcagttgtcccgaaccagcttcctggtggtcctgtaggtttg
caccccagcacgcccactcagatgcaggctagtccagtggttacctcacttcctgtggca
agcactccctctgcccttgcaaagcctgcgacgactactcttgtggggcagcctacgacc
ctgttgagacctggcacaccaactccagggacggcgacagctgtgacccagcagcgtcca
ggggctcctacgacccagctggtggttaggccacagcagcaaaacatccagttacctcca
ggattcaccataccaccaggtatggttctagtacgtacagaggtgggtcagcttgtgctg
gttcctcaacaggtcctggcccaggtcaaagctcagaatcaaaataagggcacgctgtct
ccaagacctgctacaccgactgccacaacgtcctttagagttgccgcacctgttgcccag
aaaacagcagtggtaacaattacctcggctcagaagcccaccaccacagtcattacagca
ggggctcgcgttcagcctgcgccgcagacggtcctaaaaccctcgctgaccccgcagagt
cccaccacgacaacagctgtagccccagcaaacagatctccggtcctctctcaggaaatg
caagagaacgtgaagaagtgcaagaacttcctagcaacgctcatcaaactggcatcccat
aattccccctcaccagaaacatcgaagaacgtgaaggcactagtacaagatctgttggat
gcaaaaatcgagcccgaggagttcacgaatcgcctgcagacagagttgaagtcatctcca
caaccctacctgatcccttttctgaagaaaagtctgccagctctgcgtcttactctcctg
aactcccaacagtctttaacccagctctcccaaacctccagcacctccacagccgtgacg
gtgaacaccatcaaggctccagcaccaagcacgctgacctccacggtatctagcataagg
ccggccaccagcctggctcctgctaccactatggctgttaagaggcctggagtccaggtg
actcctacaagaatgccggttatgctcacacagaccgtccgtcctcaaggtgctgttggg
acgcactttcaagtgaggactcccatgggtgtggctgctcaagctttagccaatcaaaaa
cagaagctcaatgaccctgggggcgggactttcagggatgatgatgacatcaatgatgtg
gcatccatggctggcgtgaacctgaacgaggagaacgcccgcatcttggccactgggtct
gaactggtgggcacccagatccggtcctgtaaagatgaggccttcctccccaacagcctg
ctccacaagcgtctgctggagactgccaagaagtttggcgtgacggaggtgtcaatggag
acggtcactctgatttctcacgccactcaatccagactgcgctccatgctggagaaggtc
tccgccgtagcgcaacatcgtgcagattcctgcaaagatgaggagctgtacgagcaggcg
tcggatgtgaggacccagctgaagttctttgagcagcttgagaagatggagaagcagagg
aaagatgacgaggagcgagagattttgatgaaagccgctaaaagtcgctcgagacaggaa
gatcccgaacaagcccggcttaaacagaaagctaaggagatgcagcagcaagaactcgcc
cagatgagacaacgggacgccaatctcacagctcttgccgccattggaccccgcaagaaa
cgcaaacttgatcttctcggggcttcagcaggagcagagttacctgcgggttcctcagga
tcggcgaccggctcaacctcatcttctacctcctcagtccggcagacccgtcagcgcatc
acccgggtcaacctcagggacttgatcttctgcttggagcaggagcgaaccacagccaga
tccatgctgctttacaaggcccttctgaagtag
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