Misgurnus anguillicaudatus (oriental weatherfish): 129436040
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Entry
129436040 CDS
T09481
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129436040 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129436040 (thoc6)
03041 Spliceosome [BR:
manu03041
]
129436040 (thoc6)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129436040 (thoc6)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129436040 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
WDR54
WD40_like
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
129436040
NCBI-ProteinID:
XP_055049821
LinkDB
All DBs
Position
2:complement(29726590..29731047)
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRYLAAGNNYGEIAVFSLSAALSPDTSKGSQKPILNFTAHD
GPVFSLLSTDTHLLSAGNGEISAWSWTELIKKNTKAAWTRKPSYETSLEIPEINATIINP
KDNSLIVGGGDNNIHVMDMETGTFKSVLKGHTDYIHCLCFREREGEILSGGEDGAVRIWD
ARTNQPVHCIEVFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIFAVGEGPNVSHCLHGGTVKAQIPCTPSSLNTLALNLKNTEHRVMT
VGGSSNQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttgagctcctgcacatgtccgtgttctcgcagagtttctctccctgcggt
cgttaccttgcagcgggtaataattatggagagatcgcagtgttcagcttatcggctgca
ctgagtccagatacatcaaaggggagtcagaagcccatccttaacttcactgcccatgat
ggtccagtgttttctcttctctccacggacactcatctcttaagcgctgggaatggagaa
ataagtgcctggagttggactgagctcattaaaaaaaataccaaagctgcctggacaaga
aaacccagttatgagactagtcttgaaattccagagattaatgcaacaatcattaatcca
aaggacaacagtttaatagttgggggtggtgacaataatattcacgttatggacatggag
actggaacctttaagtcagtactaaagggtcacactgactacatccactgtctatgcttt
cgagagagggaaggggaaattctctctggaggagaagatggtgctgtcaggatatgggac
gctcgcacaaatcagccagttcactgtattgaagtttttaaatatgaggaatgtgcacgc
ccacagtttgggaagtggattagctgtcttgctacagactccgattggatgctatgtggt
ggagggccttctctctctttatggcacctccgttctatgtctcctacctcggtcttccca
ttgcctggctgtcaaagggaagctgtattttaccaggacctgatctttgcagtaggtgag
gggccaaatgtatctcactgcttacatggggggaccgtcaaagctcagattccctgcact
ccttcttcgctcaacacactggctctcaatctcaaaaacactgaacacagggttatgact
gtagggggcagcagtaaccaaattgacgtttttaccaacttcagttatagagcattttct
ctgtcattttga
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integrated database retrieval system
