Misgurnus anguillicaudatus (oriental weatherfish): 129436201
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Entry
129436201 CDS
T09481
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
manu01001
]
129436201 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
manu04054
]
129436201 (ciita)
Enzymes [BR:
manu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129436201 (ciita)
Protein kinases [BR:
manu01001
]
Serine/threonine kinases: Other
TAF1 family
129436201 (ciita)
Pattern recognition receptors [BR:
manu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129436201 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_lid_10
AAA_25
nSTAND3
RsgA_GTPase
ABC_tran
nSTAND_NTPase5
DUF87
MMR_HSR1
AAA_22
AAA_14
AAA_29
Motif
Other DBs
NCBI-GeneID:
129436201
NCBI-ProteinID:
XP_055050153
LinkDB
All DBs
Position
19:29336130..29354310
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AA seq
1175 aa
AA seq
DB search
MSSCCAVMISFEDVLFQVRKAVQVGPSLLYDLLKELHEAGVFSTEYYRSLFKHREVAEES
LCEILLNDEEDLARKLSLPIWQKWDISQVILDSALSQEEDLDSFLNDPDAESLDIFSELL
PGDVFSKILDSILSEDSIEDILDPIFFEDDLDFQSGEADITCTLTPEIAAISDKKTNRKR
KEIRETTSKSNKTSTKRRKVTASSESPPNGTASITSEGNFHFNHNPFQPVIHVPLNSITS
FDSPPLLTSSGGSALQILQTLGSPQLFGSVVPLRPTYVIVSPQPVSPMTQILPVSPADGT
VAPPELTVAVHPVGSLSDSASKGLPSASVDTLSPTKVTSSTTAFSDGKPQNTDSPPPKPA
TKVRPEAPKCVKDFILHAKSHIREICSRMRGGLGMESHYINMNLIQRKLLIKSGKNANKC
LEKELVVISDSERKRKKLDRSQVFHSNVSRPKQSIALLGKTGVGKSTMIQRLCLDWASGS
LPQFQFVFLLNCKNIDLTKSNYSLKHLLFDLSVSPRCEKSDAVFSHVLSSPEDVLIIFDS
FDDIKDFEGLLQSPAKSPKDTKYTVKQLFSGLFQKEILPGCTLLIATRPKDVLNQVLRKT
DSLLELCCFSPEDIELYTTKYFRDSSIQEKALQKIKNERYIFTLCSNPLLCWTTCFLLEH
QDSHDDSLPSTLTDFYLKVTSKHLQLAGRENSSLSNNKKKDILQLCKMAWEGFKNHNTHI
NLIDSAELVDYCLKSGILASHGTSDRRENHFEDLYTQNLLGGVHSVQSKQVNEKMLLAHS
VVQQKKRKVQGESQDVMQRFVTGLLFQKAPSGGVCILDSSIDIQAKRKAVETHLRNLKLN
EFTPARLLELFHCVYETNNTKFARVMLKNLPDNLSFCGAQLSPSDVYVICHLLRHATALK
RTFSINLQDTCIPINGLRELVELECIKSFWAHTADTIALWEDLDQRKDELNLKGAIEKFT
LNPLKATQGYHIENLPLLVHIHREKKLPMSEFVSSLNEGVPALSHLQRLEFELGVQNGPE
VFPKLIEVLPSLQSLQHLDIEKNKIADSGAEKLAGVLHFLESLKFLNLSQNCIGDAGVEK
LAKALVSVPSLQSLSLYGNLIADNGAEQLASVLPDIKLLQDLDVKFNKFTDIGAKKLSTA
LKSCTGMKSLELWNNCIPWGVFEHLHHQDPRIRSL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctgttgcgcagtcatgatttcttttgaagatgtactgtttcaggtgagaaaa
gctgtacaggttggccccagcctcctgtatgatcttctcaaggagctgcatgaagctgga
gtcttctccacagagtactacaggtctctctttaaacaccgtgaagttgcagaggaaagt
ctgtgtgaaatccttttaaatgatgaagaggatctggcaaggaaactctctttacctatt
tggcaaaagtgggatatcagccaagttattttggattcagctttgagccaggaagaggat
ttagattcatttctaaatgatcctgatgctgaatcgttagacattttctcagaactttta
cctggcgatgttttctctaaaattcttgactccattctaagtgaagactctattgaagac
attttggatcccattttcttcgaagatgatcttgattttcaatcaggtgaagcagacata
acctgcacactgacaccagagattgctgctatttcagacaaaaagacaaatagaaaacga
aaagagataagggaaacaacatctaaatctaacaaaacttctactaagcgcagaaaagta
acggcgagttcagaaagtccccctaatggtacggccagcattacttctgagggaaatttc
catttcaaccacaatcctttccagcctgtaatacacgtgccccttaacagcataacttcc
tttgacagcccccctcttttgacctctagtggtggatctgcattgcagatactccagacc
ctcggttccccccaactattcggctctgtggttccactgaggcccacatatgtgattgtg
tcaccgcaacctgtaagtccaatgacgcaaatacttcctgtttcaccagctgatggtacg
gttgctcctccagaactcactgttgctgtgcatccagtcggctcattatcagacagtgca
agcaagggcttgccatcagcatctgtagacactctctcccctacgaaagtgacaagtagc
accacagcgttttcagatggaaagccacagaacaccgattccccacctcctaaaccagct
acaaaagtgcgtccggaagcaccaaaatgtgttaaggactttattcttcatgcaaaatcc
catatcagagagatctgctctcgtatgcgtgggggactgggaatggagtcacattacatc
aacatgaacctgatccaaaggaaactcctaatcaaatctggcaagaatgctaacaagtgt
ttggagaaagaactggttgtaatcagcgactctgagcgtaagagaaaaaaactggatagg
agtcaagtgtttcatagcaatgtttccagaccaaaacagtccatagctctccttgggaaa
accggggtgggaaaatccactatgattcagcgcttgtgtttagactgggcgagcggcagc
ctgcctcagtttcagtttgtgtttttgctgaactgtaaaaacatagaccttacaaaatct
aactacagcttgaagcacttactgttcgatttgtctgtatctcctcgctgcgagaaatcc
gatgctgtgttcagtcatgttctctcttctcccgaagacgttctcattatttttgatagt
tttgatgacattaaagactttgaggggctccttcagtcccccgctaaatcacccaaagac
actaaatacaccgttaaacagctgttctcaggtctgttccagaaggaaattctgccgggc
tgcacgcttctcattgccacgagacctaaagacgttttaaatcaggtgctgcgaaaaact
gacagtcttttggagctttgttgcttctcccctgaagacatagagctctacacaaccaaa
tatttcagggactcttccattcaggagaaggcactgcaaaaaattaagaatgaaaggtac
atattcactttatgctccaacccattgctctgctggactacctgctttctgctggagcat
caagacagccacgatgactctttgccttcaactctcacagacttttatctaaaagtgacc
tccaagcacctgcagctggccggccgggaaaacagctcattatctaacaataaaaagaag
gacatccttcaattgtgcaaaatggcttgggaaggattcaagaatcataatacgcacata
aacctcatcgattctgcagaactggtggactactgtctcaagagtggcatactcgcgtcg
catggaacgtcggaccgtcgagaaaaccactttgaagatctttacacccagaaccttcta
ggtggcgtgcactcggtgcagtctaaacaggtcaatgaaaaaatgctgctggcacatagt
gtggtccagcagaagaaacggaaagttcagggggagtcgcaggatgtgatgcagaggttc
gtcacggggctgctctttcagaaggctccttcgggtggagtttgtatcttggatagcagc
attgacattcaggccaaaaggaaagctgtagaaacccatttgcgtaacctgaagctaaat
gaatttactcctgccaggttactcgaactctttcattgtgtttacgagaccaacaacacc
aaatttgcaagagtgatgttgaagaaccttccagacaatctgtcgttctgcggagcgcag
cttagcccgtcggacgtgtacgtcatatgccatcttcttcgacacgccacggcattgaaa
cggaccttctccattaacctgcaagatacatgcattcctattaatggactcagagagctg
gtggagcttgaatgtataaaatctttctgggcacatacagcagacaccattgcattgtgg
gaggacttggatcaaagaaaagatgaattaaacttgaaaggtgccattgagaaattcacc
ttaaacccactgaaggcaacacaagggtaccacatagagaacctgccacttcttgtccac
attcatagggagaaaaagttaccaatgagtgaatttgtgtcttcgttaaatgaaggtgta
ccagccctcagtcatcttcagagactggaatttgagcttggagtccagaatggtcctgaa
gttttccctaaactcatagaggtcctgccttctctgcagtcactacaacatctagacatt
gagaaaaacaaaattgccgactctggtgctgagaagctagcaggcgttttgcactttttg
gaatccttgaaatttttaaatctgtctcagaattgcattggagatgctggagtggagaaa
ctggctaaagcactggtatcagttccttcattacagagcctcagcctgtatggtaatctt
attgctgacaatggagctgaacagctagcctcggttttacccgatattaaactattgcag
gacctggatgttaagtttaacaagttcacagacattggagctaaaaagctcagcactgct
ctgaaaagctgcactggaatgaagtctttggagctgtggaataactgcattccatgggga
gtttttgaacatctccatcatcaagacccacggattagatcactttga
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